RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 RABEP2Q9H5N1 569 aa20.16■□□□□ 0.82
TRAF4-207ENST00000461195 NPHS2Q9NP85 383 aa20.16■□□□□ 0.82
TRAF4-207ENST00000461195 EXOSC3Q9NQT5 275 aaKnown RBP20.16■□□□□ 0.82
TRAF4-207ENST00000461195 ACER3Q9NUN7 267 aa20.16■□□□□ 0.82
TRAF4-207ENST00000461195 CALML5Q9NZT1 146 aa20.16■□□□□ 0.82
TRAF4-207ENST00000461195 DCTN4Q9UJW0 460 aa20.16■□□□□ 0.82
TRAF4-207ENST00000461195 C2CD3Q4AC94 2353 aa20.16■□□□□ 0.82
TRAF4-207ENST00000461195 TACC2O95359 2948 aa20.16■□□□□ 0.82
TRAF4-207ENST00000461195 F8P00451 2351 aa20.15■□□□□ 0.82
TRAF4-207ENST00000461195 TUBAL3A6NHL2 446 aa20.15■□□□□ 0.82
TRAF4-207ENST00000461195 CLDN24A6NM45 220 aa20.15■□□□□ 0.82
TRAF4-207ENST00000461195 CLIC1O00299 241 aa20.15■□□□□ 0.82
TRAF4-207ENST00000461195 PLGP00747 810 aaPredicted RBP20.15■□□□□ 0.82
TRAF4-207ENST00000461195 DBIP07108 87 aaKnown RBP20.15■□□□□ 0.82
TRAF4-207ENST00000461195 RPS4Y1P22090 263 aaKnown RBP20.15■□□□□ 0.82
TRAF4-207ENST00000461195 SESN3P58005 492 aa20.15■□□□□ 0.82
TRAF4-207ENST00000461195 GUSBP1Q15486 140 aa20.15■□□□□ 0.82
TRAF4-207ENST00000461195 MAPK11Q15759 364 aa20.15■□□□□ 0.82
TRAF4-207ENST00000461195 FAM214BQ7L5A3 538 aa20.15■□□□□ 0.82
TRAF4-207ENST00000461195 PEX5LQ8IYB4 626 aa20.15■□□□□ 0.82
TRAF4-207ENST00000461195 WDR60Q8WVS4 1066 aa20.15■□□□□ 0.82
TRAF4-207ENST00000461195 CSMD2Q7Z408 3487 aa20.15■□□□□ 0.82
TRAF4-207ENST00000461195 ANKHD1Q8IWZ3 2542 aaKnown RBP20.14■□□□□ 0.82
TRAF4-207ENST00000461195 TMEM247A6NEH6 219 aa20.14■□□□□ 0.81
TRAF4-207ENST00000461195 BCHEP06276 602 aa20.14■□□□□ 0.81
TRAF4-207ENST00000461195 TFPTP0C1Z6 253 aa20.14■□□□□ 0.81
TRAF4-207ENST00000461195 IL7RP16871 459 aa20.14■□□□□ 0.81
TRAF4-207ENST00000461195 HOXB9P17482 250 aaPredicted RBP20.14■□□□□ 0.81
TRAF4-207ENST00000461195 NCF2P19878 526 aaPredicted RBP20.14■□□□□ 0.81
TRAF4-207ENST00000461195 RYKP34925 604 aa20.14■□□□□ 0.81
TRAF4-207ENST00000461195 CPOXP36551 454 aa20.14■□□□□ 0.81
TRAF4-207ENST00000461195 CRISP3P54108 245 aa20.14■□□□□ 0.81
TRAF4-207ENST00000461195 MERTKQ12866 999 aa20.14■□□□□ 0.81
TRAF4-207ENST00000461195 LRIF1Q5T3J3 769 aa20.14■□□□□ 0.81
TRAF4-207ENST00000461195 C3orf33Q6P1S2 294 aa20.14■□□□□ 0.81
TRAF4-207ENST00000461195 TMEM200AQ86VY9 491 aa20.14■□□□□ 0.81
TRAF4-207ENST00000461195 ZNF563Q8TA94 476 aa20.14■□□□□ 0.81
TRAF4-207ENST00000461195 SLC38A5Q8WUX1 472 aa20.14■□□□□ 0.81
TRAF4-207ENST00000461195 CNOT9Q92600 299 aaKnown RBP20.14■□□□□ 0.81
TRAF4-207ENST00000461195 CPNE4Q96A23 557 aaPredicted RBP20.14■□□□□ 0.81
TRAF4-207ENST00000461195 GMPPAQ96IJ6 420 aaPredicted RBP20.14■□□□□ 0.81
TRAF4-207ENST00000461195 SLC52A3Q9NQ40 469 aa20.14■□□□□ 0.81
TRAF4-207ENST00000461195 SERINC1Q9NRX5 453 aa20.14■□□□□ 0.81
TRAF4-207ENST00000461195 GLRX2Q9NS18 164 aa20.14■□□□□ 0.81
TRAF4-207ENST00000461195 TRIM33Q9UPN9 1127 aa20.14■□□□□ 0.81
TRAF4-207ENST00000461195 EMC9Q9Y3B6 208 aa20.14■□□□□ 0.81
TRAF4-207ENST00000461195 CELSR1Q9NYQ6 3014 aa20.14■□□□□ 0.81
TRAF4-207ENST00000461195 CGAP01215 116 aa20.13■□□□□ 0.81
TRAF4-207ENST00000461195 CD8BP10966 210 aa20.13■□□□□ 0.81
TRAF4-207ENST00000461195 NID1P14543 1247 aa20.13■□□□□ 0.81
TRAF4-207ENST00000461195 SLC7A1P30825 629 aa20.13■□□□□ 0.81
TRAF4-207ENST00000461195 CTBP2P56545 445 aa20.13■□□□□ 0.81
TRAF4-207ENST00000461195 PLAURQ03405 335 aa20.13■□□□□ 0.81
TRAF4-207ENST00000461195 FADDQ13158 208 aa20.13■□□□□ 0.81
TRAF4-207ENST00000461195 RGNQ15493 299 aa20.13■□□□□ 0.81
TRAF4-207ENST00000461195 ZNF239Q16600 458 aaKnown RBP20.13■□□□□ 0.81
TRAF4-207ENST00000461195 GTF2IRD2BQ6EKJ0 949 aa20.13■□□□□ 0.81
TRAF4-207ENST00000461195 PLEKHM3Q6ZWE6 761 aa20.13■□□□□ 0.81
TRAF4-207ENST00000461195 GTF2IRD2Q86UP8 949 aa20.13■□□□□ 0.81
TRAF4-207ENST00000461195 REXO5Q96IC2 774 aaKnown RBP20.13■□□□□ 0.81
TRAF4-207ENST00000461195 OPN3Q9H1Y3 402 aaPredicted RBP20.13■□□□□ 0.81
TRAF4-207ENST00000461195 CLEC4AQ9UMR7 237 aa20.13■□□□□ 0.81
TRAF4-207ENST00000461195 PROCRQ9UNN8 238 aa20.13■□□□□ 0.81
TRAF4-207ENST00000461195 DSPPQ9NZW4 1301 aa20.12■□□□□ 0.81
TRAF4-207ENST00000461195 UQCRHLA0A096LP55 91 aa20.12■□□□□ 0.81
TRAF4-207ENST00000461195 A0A0G2JND7 137 aa20.12■□□□□ 0.81
TRAF4-207ENST00000461195 SS18L1O75177 396 aaPredicted RBP20.12■□□□□ 0.81
TRAF4-207ENST00000461195 PABPC4LP0CB38 370 aaKnown RBP20.12■□□□□ 0.81
TRAF4-207ENST00000461195 HSP90B2PQ58FF3 399 aa20.12■□□□□ 0.81
TRAF4-207ENST00000461195 PAGE3Q5JUK9 113 aa20.12■□□□□ 0.81
TRAF4-207ENST00000461195 OR6K3Q8NGY3 331 aa20.12■□□□□ 0.81
TRAF4-207ENST00000461195 LINC01560Q8TB33 94 aa20.12■□□□□ 0.81
TRAF4-207ENST00000461195 TMEM19Q96HH6 336 aa20.12■□□□□ 0.81
TRAF4-207ENST00000461195 SRXN1Q9BYN0 137 aa20.12■□□□□ 0.81
TRAF4-207ENST00000461195 COQ10BQ9H8M1 238 aa20.12■□□□□ 0.81
TRAF4-207ENST00000461195 DNAJB12Q9NXW2 375 aaKnown RBP20.12■□□□□ 0.81
TRAF4-207ENST00000461195 SLC25A37Q9NYZ2 338 aa20.12■□□□□ 0.81
TRAF4-207ENST00000461195 MPDZO75970 2070 aa20.11■□□□□ 0.81
TRAF4-207ENST00000461195 A0A1W2PP18 115 aa20.11■□□□□ 0.81
TRAF4-207ENST00000461195 EPXP11678 715 aa20.11■□□□□ 0.81
TRAF4-207ENST00000461195 BMP2P12643 396 aa20.11■□□□□ 0.81
TRAF4-207ENST00000461195 PPIBP23284 216 aaKnown RBP20.11■□□□□ 0.81
TRAF4-207ENST00000461195 APOBEC1P41238 236 aaKnown RBP20.11■□□□□ 0.81
TRAF4-207ENST00000461195 PCYT1AP49585 367 aa20.11■□□□□ 0.81
TRAF4-207ENST00000461195 MRPL2Q5T653 305 aaKnown RBP20.11■□□□□ 0.81
TRAF4-207ENST00000461195 ZNF474Q6S9Z5 364 aaPredicted RBP20.11■□□□□ 0.81
TRAF4-207ENST00000461195 GRINAQ7Z429 371 aa20.11■□□□□ 0.81
TRAF4-207ENST00000461195 MSRB3Q8IXL7 192 aa20.11■□□□□ 0.81
TRAF4-207ENST00000461195 OR52P1PQ8NH57 321 aa20.11■□□□□ 0.81
TRAF4-207ENST00000461195 RNF128Q8TEB7 428 aa20.11■□□□□ 0.81
TRAF4-207ENST00000461195 SLC25A43Q8WUT9 341 aaPredicted RBP20.11■□□□□ 0.81
TRAF4-207ENST00000461195 ROBO4Q8WZ75 1007 aa20.11■□□□□ 0.81
TRAF4-207ENST00000461195 SLC39A3Q9BRY0 314 aa20.11■□□□□ 0.81
TRAF4-207ENST00000461195 CCDC106Q9BWC9 280 aa20.11■□□□□ 0.81
TRAF4-207ENST00000461195 ZNF385DQ9H6B1 395 aa20.11■□□□□ 0.81
TRAF4-207ENST00000461195 A4GALTQ9NPC4 353 aa20.11■□□□□ 0.81
TRAF4-207ENST00000461195 ELOVL5Q9NYP7 299 aa20.11■□□□□ 0.81
TRAF4-207ENST00000461195 SLAMF8Q9P0V8 285 aa20.11■□□□□ 0.81
TRAF4-207ENST00000461195 SPIN1Q9Y657 262 aaPredicted RBP20.11■□□□□ 0.81
TRAF4-207ENST00000461195 AKAP9Q99996 3911 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms