RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 IGHG3P01860 377 aa10□□□□□ -0.81
SMNDC1-203ENST00000460483 HOXD4P09016 255 aaPredicted RBP10□□□□□ -0.81
SMNDC1-203ENST00000460483 EDN3P14138 238 aa10□□□□□ -0.81
SMNDC1-203ENST00000460483 NQO1P15559 274 aaKnown RBP10□□□□□ -0.81
SMNDC1-203ENST00000460483 RHCEP18577 417 aa10□□□□□ -0.81
SMNDC1-203ENST00000460483 PTGER4P35408 488 aa10□□□□□ -0.81
SMNDC1-203ENST00000460483 IFNGR2P38484 337 aa10□□□□□ -0.81
SMNDC1-203ENST00000460483 SMCPP49901 116 aaPredicted RBP10□□□□□ -0.81
SMNDC1-203ENST00000460483 SESN3P58005 492 aa10□□□□□ -0.81
SMNDC1-203ENST00000460483 MERTKQ12866 999 aa10□□□□□ -0.81
SMNDC1-203ENST00000460483 SELENBP1Q13228 472 aa10□□□□□ -0.81
SMNDC1-203ENST00000460483 INPP5JQ15735 1006 aaPredicted RBP10□□□□□ -0.81
SMNDC1-203ENST00000460483 ELOA3BQ3SY89 546 aa10□□□□□ -0.81
SMNDC1-203ENST00000460483 SLC25A53Q5H9E4 307 aa10□□□□□ -0.81
SMNDC1-203ENST00000460483 NHSL2Q5HYW2 709 aa10□□□□□ -0.81
SMNDC1-203ENST00000460483 ALG10BQ5I7T1 473 aa10□□□□□ -0.81
SMNDC1-203ENST00000460483 WLSQ5T9L3 541 aa10□□□□□ -0.81
SMNDC1-203ENST00000460483 C3orf33Q6P1S2 294 aa10□□□□□ -0.81
SMNDC1-203ENST00000460483 PLEKHM3Q6ZWE6 761 aa10□□□□□ -0.81
SMNDC1-203ENST00000460483 OLIG3Q7RTU3 272 aa10□□□□□ -0.81
SMNDC1-203ENST00000460483 ATCAYQ86WG3 371 aa10□□□□□ -0.81
SMNDC1-203ENST00000460483 CDK20Q8IZL9 346 aa10□□□□□ -0.81
SMNDC1-203ENST00000460483 MEIOBQ8N635 442 aa10□□□□□ -0.81
SMNDC1-203ENST00000460483 PIK3C3Q8NEB9 887 aa10□□□□□ -0.81
SMNDC1-203ENST00000460483 FAM83FQ8NEG4 500 aaPredicted RBP10□□□□□ -0.81
SMNDC1-203ENST00000460483 ELOA3Q8NG57 546 aa10□□□□□ -0.81
SMNDC1-203ENST00000460483 VANGL1Q8TAA9 524 aaPredicted RBP10□□□□□ -0.81
SMNDC1-203ENST00000460483 NEIL3Q8TAT5 605 aa10□□□□□ -0.81
SMNDC1-203ENST00000460483 RNF217Q8TC41 542 aa10□□□□□ -0.81
SMNDC1-203ENST00000460483 CPT1CQ8TCG5 803 aa10□□□□□ -0.81
SMNDC1-203ENST00000460483 DDIT4LQ96D03 193 aa10□□□□□ -0.81
SMNDC1-203ENST00000460483 HS6ST2Q96MM7 605 aa10□□□□□ -0.81
SMNDC1-203ENST00000460483 FNDC11Q9BVV2 318 aa10□□□□□ -0.81
SMNDC1-203ENST00000460483 KLHL4Q9C0H6 718 aa10□□□□□ -0.81
SMNDC1-203ENST00000460483 ANKRD19PQ9H560 264 aa10□□□□□ -0.81
SMNDC1-203ENST00000460483 FBXL2Q9UKC9 423 aa10□□□□□ -0.81
SMNDC1-203ENST00000460483 NPIPA1Q9UND3 350 aa10□□□□□ -0.81
SMNDC1-203ENST00000460483 USP22Q9UPT9 525 aa10□□□□□ -0.81
SMNDC1-203ENST00000460483 AURKCQ9UQB9 309 aa10□□□□□ -0.81
SMNDC1-203ENST00000460483 VDAC3Q9Y277 283 aa10□□□□□ -0.81
SMNDC1-203ENST00000460483 CROCCQ5TZA2 2017 aa9.99□□□□□ -0.81
SMNDC1-203ENST00000460483 CENPVL1A0A0U1RR11 272 aa9.99□□□□□ -0.81
SMNDC1-203ENST00000460483 A0A1B0GVC2 190 aa9.99□□□□□ -0.81
SMNDC1-203ENST00000460483 CLDN24A6NM45 220 aa9.99□□□□□ -0.81
SMNDC1-203ENST00000460483 FIGNL2A6NMB9 653 aa9.99□□□□□ -0.81
SMNDC1-203ENST00000460483 ETV2O00321 342 aaPredicted RBP9.99□□□□□ -0.81
SMNDC1-203ENST00000460483 AQP7O14520 342 aa9.99□□□□□ -0.81
SMNDC1-203ENST00000460483 GNGT2O14610 69 aa9.99□□□□□ -0.81
SMNDC1-203ENST00000460483 PRRG2O14669 202 aa9.99□□□□□ -0.81
SMNDC1-203ENST00000460483 ZNF208O43345 1280 aa9.99□□□□□ -0.81
SMNDC1-203ENST00000460483 OR2T1O43869 369 aa9.99□□□□□ -0.81
SMNDC1-203ENST00000460483 GMFGO60234 142 aa9.99□□□□□ -0.81
SMNDC1-203ENST00000460483 TPST1O60507 370 aa9.99□□□□□ -0.81
SMNDC1-203ENST00000460483 GKN3PP0CG01 181 aa9.99□□□□□ -0.81
SMNDC1-203ENST00000460483 PRKCAP17252 672 aa9.99□□□□□ -0.81
SMNDC1-203ENST00000460483 POU3F2P20265 443 aaPredicted RBP9.99□□□□□ -0.81
SMNDC1-203ENST00000460483 SLC7A1P30825 629 aa9.99□□□□□ -0.81
SMNDC1-203ENST00000460483 DLX5P56178 289 aa9.99□□□□□ -0.81
SMNDC1-203ENST00000460483 RAC1P63000 192 aa9.99□□□□□ -0.81
SMNDC1-203ENST00000460483 MS4A2Q01362 244 aa9.99□□□□□ -0.81
SMNDC1-203ENST00000460483 MFSD13AQ14CX5 517 aa9.99□□□□□ -0.81
SMNDC1-203ENST00000460483 OR1Q1Q15612 314 aa9.99□□□□□ -0.81
SMNDC1-203ENST00000460483 NPTX1Q15818 432 aa9.99□□□□□ -0.81
SMNDC1-203ENST00000460483 PLPPR5Q32ZL2 321 aa9.99□□□□□ -0.81
SMNDC1-203ENST00000460483 LCE2AQ5TA79 106 aaPredicted RBP9.99□□□□□ -0.81
SMNDC1-203ENST00000460483 DEF8Q6ZN54 512 aa9.99□□□□□ -0.81
SMNDC1-203ENST00000460483 PIWIL3Q7Z3Z3 882 aaKnown RBP9.99□□□□□ -0.81
SMNDC1-203ENST00000460483 HMGN2P46Q86SG4 172 aa9.99□□□□□ -0.81
SMNDC1-203ENST00000460483 LINC00471Q8N535 108 aa9.99□□□□□ -0.81
SMNDC1-203ENST00000460483 OR6T1Q8NGN1 323 aa9.99□□□□□ -0.81
SMNDC1-203ENST00000460483 ADAMTS16Q8TE57 1224 aa9.99□□□□□ -0.81
SMNDC1-203ENST00000460483 ABTB1Q969K4 478 aaPredicted RBP9.99□□□□□ -0.81
SMNDC1-203ENST00000460483 SNRNP40Q96DI7 357 aaKnown RBP9.99□□□□□ -0.81
SMNDC1-203ENST00000460483 ZHX1-C8orf76Q96EF9 292 aa9.99□□□□□ -0.81
SMNDC1-203ENST00000460483 PRRC1Q96M27 445 aa9.99□□□□□ -0.81
SMNDC1-203ENST00000460483 SEPHS2Q99611 448 aa9.99□□□□□ -0.81
SMNDC1-203ENST00000460483 SLC19A3Q9BZV2 496 aa9.99□□□□□ -0.81
SMNDC1-203ENST00000460483 DEFB127Q9H1M4 99 aa9.99□□□□□ -0.81
SMNDC1-203ENST00000460483 CHRNA9Q9UGM1 479 aa9.99□□□□□ -0.81
SMNDC1-203ENST00000460483 ACAD8Q9UKU7 415 aa9.99□□□□□ -0.81
SMNDC1-203ENST00000460483 TMCC3Q9ULS5 477 aa9.99□□□□□ -0.81
SMNDC1-203ENST00000460483 ENPP4Q9Y6X5 453 aa9.99□□□□□ -0.81
SMNDC1-203ENST00000460483 CELSR3Q9NYQ7 3312 aa9.98□□□□□ -0.81
SMNDC1-203ENST00000460483 A0A0G2JMM0 328 aa9.98□□□□□ -0.81
SMNDC1-203ENST00000460483 A0A1W2PPB8 328 aa9.98□□□□□ -0.81
SMNDC1-203ENST00000460483 A0A1W2PRS3 328 aa9.98□□□□□ -0.81
SMNDC1-203ENST00000460483 PINLYPA6NC86 204 aa9.98□□□□□ -0.81
SMNDC1-203ENST00000460483 A8MVM7 634 aa9.98□□□□□ -0.81
SMNDC1-203ENST00000460483 KIR3DP1A8MWS1 328 aa9.98□□□□□ -0.81
SMNDC1-203ENST00000460483 B8ZZF3 427 aa9.98□□□□□ -0.81
SMNDC1-203ENST00000460483 H0YHG0 523 aa9.98□□□□□ -0.81
SMNDC1-203ENST00000460483 M0R3H8 397 aa9.98□□□□□ -0.81
SMNDC1-203ENST00000460483 HNRNPRO43390 633 aaKnown RBP9.98□□□□□ -0.81
SMNDC1-203ENST00000460483 CHP2O43745 196 aa9.98□□□□□ -0.81
SMNDC1-203ENST00000460483 RFPL3SP0C7P2 107 aa9.98□□□□□ -0.81
SMNDC1-203ENST00000460483 GABRA1P14867 456 aa9.98□□□□□ -0.81
SMNDC1-203ENST00000460483 ABOP16442 354 aa9.98□□□□□ -0.81
SMNDC1-203ENST00000460483 GTF2E2P29084 291 aaKnown RBP9.98□□□□□ -0.81
SMNDC1-203ENST00000460483 TACR3P29371 465 aa9.98□□□□□ -0.81
SMNDC1-203ENST00000460483 PTGS2P35354 604 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms