RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 FAAHO00519 579 aa14.52□□□□□ -0.09
CD28-203ENST00000458610 PGM3O95394 542 aa14.52□□□□□ -0.09
CD28-203ENST00000458610 TGM6O95932 706 aa14.52□□□□□ -0.09
CD28-203ENST00000458610 SLC7A1P30825 629 aa14.52□□□□□ -0.09
CD28-203ENST00000458610 MAP2K6P52564 334 aa14.52□□□□□ -0.09
CD28-203ENST00000458610 DLX5P56178 289 aa14.52□□□□□ -0.09
CD28-203ENST00000458610 COPZ1P61923 177 aa14.52□□□□□ -0.09
CD28-203ENST00000458610 CDK6Q00534 326 aa14.52□□□□□ -0.09
CD28-203ENST00000458610 RBBP4Q09028 425 aa14.52□□□□□ -0.09
CD28-203ENST00000458610 MERTKQ12866 999 aa14.52□□□□□ -0.09
CD28-203ENST00000458610 SF3A3Q12874 501 aaKnown RBP eCLIP14.52□□□□□ -0.09
CD28-203ENST00000458610 KLF10Q13118 480 aa14.52□□□□□ -0.09
CD28-203ENST00000458610 MAPK11Q15759 364 aa14.52□□□□□ -0.09
CD28-203ENST00000458610 TMEM176BQ3YBM2 270 aaPredicted RBP14.52□□□□□ -0.09
CD28-203ENST00000458610 ZNF311Q5JNZ3 666 aa14.52□□□□□ -0.09
CD28-203ENST00000458610 MRPL2Q5T653 305 aaKnown RBP14.52□□□□□ -0.09
CD28-203ENST00000458610 ZNF787Q6DD87 383 aa14.52□□□□□ -0.09
CD28-203ENST00000458610 HIST2H2BCQ6DN03 193 aa14.52□□□□□ -0.09
CD28-203ENST00000458610 C3orf33Q6P1S2 294 aa14.52□□□□□ -0.09
CD28-203ENST00000458610 GRINAQ7Z429 371 aa14.52□□□□□ -0.09
CD28-203ENST00000458610 SLC25A43Q8WUT9 341 aaPredicted RBP14.52□□□□□ -0.09
CD28-203ENST00000458610 FIG4Q92562 907 aa14.52□□□□□ -0.09
CD28-203ENST00000458610 CNOT9Q92600 299 aaKnown RBP14.52□□□□□ -0.09
CD28-203ENST00000458610 SLC35B4Q969S0 331 aa14.52□□□□□ -0.09
CD28-203ENST00000458610 MARVELD3Q96A59 401 aa14.52□□□□□ -0.09
CD28-203ENST00000458610 ZNF607Q96SK3 696 aa14.52□□□□□ -0.09
CD28-203ENST00000458610 SPATA9Q9BWV2 254 aa14.52□□□□□ -0.09
CD28-203ENST00000458610 TMEM185BQ9H7F4 350 aa14.52□□□□□ -0.09
CD28-203ENST00000458610 ASH1LQ9NR48 2969 aaKnown RBP14.52□□□□□ -0.09
CD28-203ENST00000458610 CAPN7Q9Y6W3 813 aa14.52□□□□□ -0.09
CD28-203ENST00000458610 A0A0J9YW62 118 aa14.51□□□□□ -0.09
CD28-203ENST00000458610 CDHR4A6H8M9 788 aa14.51□□□□□ -0.09
CD28-203ENST00000458610 H0YC42 278 aa14.51□□□□□ -0.09
CD28-203ENST00000458610 TNFSF11O14788 317 aa14.51□□□□□ -0.09
CD28-203ENST00000458610 CXCL13O43927 109 aa14.51□□□□□ -0.09
CD28-203ENST00000458610 SERPINB7O75635 380 aa14.51□□□□□ -0.09
CD28-203ENST00000458610 PLGP00747 810 aaPredicted RBP14.51□□□□□ -0.09
CD28-203ENST00000458610 NUDT7P0C024 238 aa14.51□□□□□ -0.09
CD28-203ENST00000458610 ARAFP10398 606 aa14.51□□□□□ -0.09
CD28-203ENST00000458610 SFTPDP35247 375 aa14.51□□□□□ -0.09
CD28-203ENST00000458610 IDH2P48735 452 aaKnown RBP14.51□□□□□ -0.09
CD28-203ENST00000458610 CLK1P49759 484 aaKnown RBP14.51□□□□□ -0.09
CD28-203ENST00000458610 TPD52P55327 224 aaPredicted RBP14.51□□□□□ -0.09
CD28-203ENST00000458610 FBXL19-AS1Q494R0 122 aa14.51□□□□□ -0.09
CD28-203ENST00000458610 RNF220Q5VTB9 566 aa14.51□□□□□ -0.09
CD28-203ENST00000458610 PPP4R4Q6NUP7 873 aa14.51□□□□□ -0.09
CD28-203ENST00000458610 MEX3BQ6ZN04 569 aaKnown RBP14.51□□□□□ -0.09
CD28-203ENST00000458610 PLEKHM3Q6ZWE6 761 aa14.51□□□□□ -0.09
CD28-203ENST00000458610 CPLX4Q7Z7G2 160 aa14.51□□□□□ -0.09
CD28-203ENST00000458610 HMGN2P46Q86SG4 172 aa14.51□□□□□ -0.09
CD28-203ENST00000458610 KIF18BQ86Y91 864 aa14.51□□□□□ -0.09
CD28-203ENST00000458610 SLC30A8Q8IWU4 369 aa14.51□□□□□ -0.09
CD28-203ENST00000458610 MCEMP1Q8IX19 187 aa14.51□□□□□ -0.09
CD28-203ENST00000458610 ATP6V1C2Q8NEY4 427 aa14.51□□□□□ -0.09
CD28-203ENST00000458610 BHLHE22Q8NFJ8 381 aaPredicted RBP14.51□□□□□ -0.09
CD28-203ENST00000458610 FNDC9Q8TBE3 224 aa14.51□□□□□ -0.09
CD28-203ENST00000458610 RNASE6Q93091 150 aaKnown RBP14.51□□□□□ -0.09
CD28-203ENST00000458610 MAL2Q969L2 176 aa14.51□□□□□ -0.09
CD28-203ENST00000458610 CPNE4Q96A23 557 aaPredicted RBP14.51□□□□□ -0.09
CD28-203ENST00000458610 ZNF845Q96IR2 970 aaPredicted RBP14.51□□□□□ -0.09
CD28-203ENST00000458610 ADGRG7Q96K78 797 aa14.51□□□□□ -0.09
CD28-203ENST00000458610 NPAS1Q99742 590 aa14.51□□□□□ -0.09
CD28-203ENST00000458610 GID8Q9NWU2 228 aa14.51□□□□□ -0.09
CD28-203ENST00000458610 DNAJB12Q9NXW2 375 aaKnown RBP14.51□□□□□ -0.09
CD28-203ENST00000458610 PACSIN3Q9UKS6 424 aa14.51□□□□□ -0.09
CD28-203ENST00000458610 ANGPT4Q9Y264 503 aa14.51□□□□□ -0.09
CD28-203ENST00000458610 ZNF443Q9Y2A4 671 aaPredicted RBP14.51□□□□□ -0.09
CD28-203ENST00000458610 GMNCA6NCL1 334 aa14.5□□□□□ -0.09
CD28-203ENST00000458610 PRORSD1PA6NEY8 169 aa14.5□□□□□ -0.09
CD28-203ENST00000458610 CLDN24A6NM45 220 aa14.5□□□□□ -0.09
CD28-203ENST00000458610 C19orf84I3L1E1 186 aa14.5□□□□□ -0.09
CD28-203ENST00000458610 EFNA2O43921 213 aa14.5□□□□□ -0.09
CD28-203ENST00000458610 OPN1LWP04000 364 aa14.5□□□□□ -0.09
CD28-203ENST00000458610 IL11P20809 199 aa14.5□□□□□ -0.09
CD28-203ENST00000458610 TFF3Q07654 80 aa14.5□□□□□ -0.09
CD28-203ENST00000458610 SCARB2Q14108 478 aa14.5□□□□□ -0.09
CD28-203ENST00000458610 CYP51A1Q16850 503 aa14.5□□□□□ -0.09
CD28-203ENST00000458610 CTU2Q2VPK5 515 aaKnown RBP14.5□□□□□ -0.09
CD28-203ENST00000458610 TRMT5Q32P41 509 aaKnown RBP14.5□□□□□ -0.09
CD28-203ENST00000458610 RPS26P11Q5JNZ5 115 aaPredicted RBP14.5□□□□□ -0.09
CD28-203ENST00000458610 POMZP3Q6PJE2 187 aa14.5□□□□□ -0.09
CD28-203ENST00000458610 ZNF836Q6ZNA1 936 aa14.5□□□□□ -0.09
CD28-203ENST00000458610 SPATA21Q7Z572 469 aa14.5□□□□□ -0.09
CD28-203ENST00000458610 RETREG3Q86VR2 466 aa14.5□□□□□ -0.09
CD28-203ENST00000458610 VRK2Q86Y07 508 aa14.5□□□□□ -0.09
CD28-203ENST00000458610 C11orf65Q8NCR3 313 aa14.5□□□□□ -0.09
CD28-203ENST00000458610 HIPK4Q8NE63 616 aa14.5□□□□□ -0.09
CD28-203ENST00000458610 NFKBIDQ8NI38 313 aa14.5□□□□□ -0.09
CD28-203ENST00000458610 RP9Q8TA86 221 aaKnown RBP14.5□□□□□ -0.09
CD28-203ENST00000458610 C10orf82Q8WW14 230 aa14.5□□□□□ -0.09
CD28-203ENST00000458610 ELAC2Q9BQ52 826 aaKnown RBP14.5□□□□□ -0.09
CD28-203ENST00000458610 KLHDC3Q9BQ90 382 aa14.5□□□□□ -0.09
CD28-203ENST00000458610 CPPED1Q9BRF8 314 aaPredicted RBP14.5□□□□□ -0.09
CD28-203ENST00000458610 EVA1AQ9H8M9 152 aa14.5□□□□□ -0.09
CD28-203ENST00000458610 RNF122Q9H9V4 155 aa14.5□□□□□ -0.09
CD28-203ENST00000458610 EMC9Q9Y3B6 208 aa14.5□□□□□ -0.09
CD28-203ENST00000458610 LOC100653049A0A140TA62 436 aa14.49□□□□□ -0.09
CD28-203ENST00000458610 A0A1W2PNV4 684 aa14.49□□□□□ -0.09
CD28-203ENST00000458610 EEF1E1-BLOC1S5C9J1V9 151 aa14.49□□□□□ -0.09
CD28-203ENST00000458610 EEF1E1O43324 174 aaKnown RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms