RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 FHL1Q13642 323 aa13.89□□□□□ -0.19
LDLR-202ENST00000455727 ZNF267Q14586 743 aaPredicted RBP13.89□□□□□ -0.19
LDLR-202ENST00000455727 CT45A2Q5DJT8 189 aa13.89□□□□□ -0.19
LDLR-202ENST00000455727 NPSR1Q6W5P4 371 aa13.89□□□□□ -0.19
LDLR-202ENST00000455727 B3GLCTQ6Y288 498 aa13.89□□□□□ -0.19
LDLR-202ENST00000455727 TMEM91Q6ZNR0 172 aa13.89□□□□□ -0.19
LDLR-202ENST00000455727 NCCRP1Q6ZVX7 275 aaPredicted RBP13.89□□□□□ -0.19
LDLR-202ENST00000455727 NRARPQ7Z6K4 114 aa13.89□□□□□ -0.19
LDLR-202ENST00000455727 GPALPP1Q8IXQ4 340 aa13.89□□□□□ -0.19
LDLR-202ENST00000455727 TMEM99Q8N816 258 aa13.89□□□□□ -0.19
LDLR-202ENST00000455727 TSTD1Q8NFU3 115 aa13.89□□□□□ -0.19
LDLR-202ENST00000455727 OR51A7Q8NH64 312 aa13.89□□□□□ -0.19
LDLR-202ENST00000455727 AHCYL2Q96HN2 611 aaKnown RBP13.89□□□□□ -0.19
LDLR-202ENST00000455727 TNFRSF13CQ96RJ3 184 aa13.89□□□□□ -0.19
LDLR-202ENST00000455727 SOSTQ9BQB4 213 aa13.89□□□□□ -0.19
LDLR-202ENST00000455727 TRIM36Q9NQ86 728 aa13.89□□□□□ -0.19
LDLR-202ENST00000455727 TIGARQ9NQ88 270 aa13.89□□□□□ -0.19
LDLR-202ENST00000455727 SERTAD3Q9UJW9 196 aa13.89□□□□□ -0.19
LDLR-202ENST00000455727 PLCL2Q9UPR0 1127 aa13.89□□□□□ -0.19
LDLR-202ENST00000455727 EFCAB7A8K855 629 aa13.88□□□□□ -0.19
LDLR-202ENST00000455727 GTPBP1O00178 669 aaKnown RBP13.88□□□□□ -0.19
LDLR-202ENST00000455727 NGFRP08138 427 aa13.88□□□□□ -0.19
LDLR-202ENST00000455727 SBK2P0C263 348 aa13.88□□□□□ -0.19
LDLR-202ENST00000455727 SRFP11831 508 aa13.88□□□□□ -0.19
LDLR-202ENST00000455727 RFX2P48378 723 aa13.88□□□□□ -0.19
LDLR-202ENST00000455727 TRAM1Q15629 374 aa13.88□□□□□ -0.19
LDLR-202ENST00000455727 KLHL12Q53G59 568 aa13.88□□□□□ -0.19
LDLR-202ENST00000455727 ARHGAP11AQ6P4F7 1023 aa13.88□□□□□ -0.19
LDLR-202ENST00000455727 C17orf82Q86X59 251 aaPredicted RBP13.88□□□□□ -0.19
LDLR-202ENST00000455727 CAMKK1Q8N5S9 505 aa13.88□□□□□ -0.19
LDLR-202ENST00000455727 SPACA7Q96KW9 195 aa13.88□□□□□ -0.19
LDLR-202ENST00000455727 ATF6BQ99941 703 aa13.88□□□□□ -0.19
LDLR-202ENST00000455727 PELOQ9BRX2 385 aaKnown RBP13.88□□□□□ -0.19
LDLR-202ENST00000455727 MCCC2Q9HCC0 563 aa13.88□□□□□ -0.19
LDLR-202ENST00000455727 DTX4Q9Y2E6 619 aa13.88□□□□□ -0.19
LDLR-202ENST00000455727 SPTBP11277 2137 aa13.88□□□□□ -0.19
LDLR-202ENST00000455727 A0A1W2PQ09 198 aa13.87□□□□□ -0.19
LDLR-202ENST00000455727 ZC3H12DA2A288 527 aaKnown RBP13.87□□□□□ -0.19
LDLR-202ENST00000455727 DYRK3O43781 588 aa13.87□□□□□ -0.19
LDLR-202ENST00000455727 TMCC2O75069 709 aa13.87□□□□□ -0.19
LDLR-202ENST00000455727 RGS9O75916 674 aaPredicted RBP13.87□□□□□ -0.19
LDLR-202ENST00000455727 IFNGP01579 166 aa13.87□□□□□ -0.19
LDLR-202ENST00000455727 MT-ND5P03915 603 aa13.87□□□□□ -0.19
LDLR-202ENST00000455727 CD27P26842 260 aa13.87□□□□□ -0.19
LDLR-202ENST00000455727 TMED10P49755 219 aaKnown RBP13.87□□□□□ -0.19
LDLR-202ENST00000455727 GPR143P51810 404 aa13.87□□□□□ -0.19
LDLR-202ENST00000455727 BTG2P78543 158 aa13.87□□□□□ -0.19
LDLR-202ENST00000455727 POU4F2Q12837 409 aa13.87□□□□□ -0.19
LDLR-202ENST00000455727 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.87□□□□□ -0.19
LDLR-202ENST00000455727 TCTE1Q5JU00 501 aa13.87□□□□□ -0.19
LDLR-202ENST00000455727 AGAP6Q5VW22 663 aa13.87□□□□□ -0.19
LDLR-202ENST00000455727 ZNF687Q8N1G0 1237 aa13.87□□□□□ -0.19
LDLR-202ENST00000455727 FAM160A2Q8N612 972 aaPredicted RBP13.87□□□□□ -0.19
LDLR-202ENST00000455727 CELF2-AS1Q8N7Q2 184 aa13.87□□□□□ -0.19
LDLR-202ENST00000455727 OIT3Q8WWZ8 545 aa13.87□□□□□ -0.19
LDLR-202ENST00000455727 RLN3Q8WXF3 142 aa13.87□□□□□ -0.19
LDLR-202ENST00000455727 AGAP4Q96P64 663 aa13.87□□□□□ -0.19
LDLR-202ENST00000455727 SLC38A3Q99624 504 aa13.87□□□□□ -0.19
LDLR-202ENST00000455727 OR10A5Q9H207 317 aa13.87□□□□□ -0.19
LDLR-202ENST00000455727 ADGRL4Q9HBW9 690 aa13.87□□□□□ -0.19
LDLR-202ENST00000455727 C2orf42Q9NWW7 574 aa13.87□□□□□ -0.19
LDLR-202ENST00000455727 A0A1W2PR77 199 aa13.87□□□□□ -0.19
LDLR-202ENST00000455727 H0YIG0 161 aa13.87□□□□□ -0.19
LDLR-202ENST00000455727 PLPP2O43688 288 aa13.87□□□□□ -0.19
LDLR-202ENST00000455727 SSX4O60224 188 aa13.87□□□□□ -0.19
LDLR-202ENST00000455727 PPP1R3DO95685 299 aa13.87□□□□□ -0.19
LDLR-202ENST00000455727 WNT1P04628 370 aa13.87□□□□□ -0.19
LDLR-202ENST00000455727 CSF3P09919 207 aa13.87□□□□□ -0.19
LDLR-202ENST00000455727 IL9P15248 144 aa13.87□□□□□ -0.19
LDLR-202ENST00000455727 AZGP1P25311 298 aaKnown RBP13.87□□□□□ -0.19
LDLR-202ENST00000455727 CD38P28907 300 aa13.87□□□□□ -0.19
LDLR-202ENST00000455727 CASP3P42574 277 aa13.87□□□□□ -0.19
LDLR-202ENST00000455727 MTNR1BP49286 362 aa13.87□□□□□ -0.19
LDLR-202ENST00000455727 MAT1AQ00266 395 aaKnown RBP13.87□□□□□ -0.19
LDLR-202ENST00000455727 CRMP1Q14194 572 aa13.87□□□□□ -0.19
LDLR-202ENST00000455727 GAS6Q14393 721 aa13.87□□□□□ -0.19
LDLR-202ENST00000455727 MZT2AQ6P582 158 aa13.87□□□□□ -0.19
LDLR-202ENST00000455727 GATAD2AQ86YP4 633 aa13.87□□□□□ -0.19
LDLR-202ENST00000455727 ZNF615Q8N8J6 731 aa13.87□□□□□ -0.19
LDLR-202ENST00000455727 OR10H4Q8NGA5 316 aa13.87□□□□□ -0.19
LDLR-202ENST00000455727 OR5W2Q8NH69 310 aa13.87□□□□□ -0.19
LDLR-202ENST00000455727 C16orf52Q8NHV5 167 aa13.87□□□□□ -0.19
LDLR-202ENST00000455727 NDC1Q9BTX1 674 aa13.87□□□□□ -0.19
LDLR-202ENST00000455727 OR51V1Q9H2C8 321 aa13.87□□□□□ -0.19
LDLR-202ENST00000455727 RPS6KB2Q9UBS0 482 aa13.87□□□□□ -0.19
LDLR-202ENST00000455727 ICAM5Q9UMF0 924 aa13.87□□□□□ -0.19
LDLR-202ENST00000455727 SHISA3A0PJX4 238 aa13.86□□□□□ -0.19
LDLR-202ENST00000455727 FITM1A5D6W6 292 aa13.86□□□□□ -0.19
LDLR-202ENST00000455727 METTL12A8MUP2 240 aa13.86□□□□□ -0.19
LDLR-202ENST00000455727 REM1O75628 298 aa13.86□□□□□ -0.19
LDLR-202ENST00000455727 CDC123O75794 336 aaPredicted RBP13.86□□□□□ -0.19
LDLR-202ENST00000455727 POU3F3P20264 500 aaPredicted RBP13.86□□□□□ -0.19
LDLR-202ENST00000455727 F8A1P23610 371 aa13.86□□□□□ -0.19
LDLR-202ENST00000455727 CAV3P56539 151 aa13.86□□□□□ -0.19
LDLR-202ENST00000455727 TAS2R43P59537 309 aa13.86□□□□□ -0.19
LDLR-202ENST00000455727 RPS7P62081 194 aaKnown RBP13.86□□□□□ -0.19
LDLR-202ENST00000455727 ACTC1P68032 377 aa13.86□□□□□ -0.19
LDLR-202ENST00000455727 ACTA1P68133 377 aa13.86□□□□□ -0.19
LDLR-202ENST00000455727 CRYZQ08257 329 aaKnown RBP13.86□□□□□ -0.19
LDLR-202ENST00000455727 RIN1Q13671 783 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms