RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 IL4I1Q96RQ9 567 aa4.07□□□□□ -1.76
HMGB1P26-201ENST00000452520 RBM4BQ9BQ04 359 aaKnown RBP4.07□□□□□ -1.76
HMGB1P26-201ENST00000452520 GLIPR2Q9H4G4 154 aa4.07□□□□□ -1.76
HMGB1P26-201ENST00000452520 ZNF446Q9NWS9 450 aa4.07□□□□□ -1.76
HMGB1P26-201ENST00000452520 BARX2Q9UMQ3 279 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P26-201ENST00000452520 SCML2Q9UQR0 700 aa4.07□□□□□ -1.76
HMGB1P26-201ENST00000452520 NTNG1Q9Y2I2 539 aa4.07□□□□□ -1.76
HMGB1P26-201ENST00000452520 RPAP1Q9BWH6 1393 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P26-201ENST00000452520 IGHV3OR16-10A0A075B7F0 116 aa4.06□□□□□ -1.76
HMGB1P26-201ENST00000452520 H3BMQ9 156 aa4.06□□□□□ -1.76
HMGB1P26-201ENST00000452520 GOLGA8SH3BPF8 625 aa4.06□□□□□ -1.76
HMGB1P26-201ENST00000452520 K7EQG2 157 aa4.06□□□□□ -1.76
HMGB1P26-201ENST00000452520 RGS16O15492 202 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P26-201ENST00000452520 ATP5LO75964 103 aa4.06□□□□□ -1.76
HMGB1P26-201ENST00000452520 NUDT14O95848 222 aa4.06□□□□□ -1.76
HMGB1P26-201ENST00000452520 FTH1P02794 183 aa4.06□□□□□ -1.76
HMGB1P26-201ENST00000452520 TPM1P09493 284 aa4.06□□□□□ -1.76
HMGB1P26-201ENST00000452520 MCF2P10911 925 aa4.06□□□□□ -1.76
HMGB1P26-201ENST00000452520 SDC1P18827 310 aa4.06□□□□□ -1.76
HMGB1P26-201ENST00000452520 CRYBB2P43320 205 aa4.06□□□□□ -1.76
HMGB1P26-201ENST00000452520 RPS5P46782 204 aaKnown RBP4.06□□□□□ -1.76
HMGB1P26-201ENST00000452520 SLC11A1P49279 550 aa4.06□□□□□ -1.76
HMGB1P26-201ENST00000452520 CSNK1EP49674 416 aaKnown RBP4.06□□□□□ -1.76
HMGB1P26-201ENST00000452520 MFAP2P55001 183 aa4.06□□□□□ -1.76
HMGB1P26-201ENST00000452520 CLDN8P56748 225 aa4.06□□□□□ -1.76
HMGB1P26-201ENST00000452520 FKBP3Q00688 224 aaKnown RBP4.06□□□□□ -1.76
HMGB1P26-201ENST00000452520 MECOMQ03112 1051 aa4.06□□□□□ -1.76
HMGB1P26-201ENST00000452520 MERTKQ12866 999 aa4.06□□□□□ -1.76
HMGB1P26-201ENST00000452520 CUL1Q13616 776 aa4.06□□□□□ -1.76
HMGB1P26-201ENST00000452520 PPP1R3AQ16821 1122 aa4.06□□□□□ -1.76
HMGB1P26-201ENST00000452520 SBK1Q52WX2 424 aa4.06□□□□□ -1.76
HMGB1P26-201ENST00000452520 LINC00242Q5T6M2 205 aa4.06□□□□□ -1.76
HMGB1P26-201ENST00000452520 AGBL2Q5U5Z8 902 aa4.06□□□□□ -1.76
HMGB1P26-201ENST00000452520 AADACL4Q5VUY2 407 aa4.06□□□□□ -1.76
HMGB1P26-201ENST00000452520 FAM219BQ5XKK7 198 aa4.06□□□□□ -1.76
HMGB1P26-201ENST00000452520 PVRIGQ6DKI7 326 aa4.06□□□□□ -1.76
HMGB1P26-201ENST00000452520 ENPP6Q6UWR7 440 aa4.06□□□□□ -1.76
HMGB1P26-201ENST00000452520 STXBP4Q6ZWJ1 553 aa4.06□□□□□ -1.76
HMGB1P26-201ENST00000452520 LUZP2Q86TE4 346 aa4.06□□□□□ -1.76
HMGB1P26-201ENST00000452520 C15orf54Q8N8G6 183 aa4.06□□□□□ -1.76
HMGB1P26-201ENST00000452520 OR4D9Q8NGE8 314 aa4.06□□□□□ -1.76
HMGB1P26-201ENST00000452520 SSC4DQ8WTU2 575 aa4.06□□□□□ -1.76
HMGB1P26-201ENST00000452520 TSEN15Q8WW01 171 aaKnown RBP4.06□□□□□ -1.76
HMGB1P26-201ENST00000452520 TSNARE1Q96NA8 513 aa4.06□□□□□ -1.76
HMGB1P26-201ENST00000452520 FMO2Q99518 471 aa4.06□□□□□ -1.76
HMGB1P26-201ENST00000452520 NIPSNAP3BQ9BS92 247 aa4.06□□□□□ -1.76
HMGB1P26-201ENST00000452520 IQCGQ9H095 443 aaKnown RBP4.06□□□□□ -1.76
HMGB1P26-201ENST00000452520 RHBGQ9H310 441 aa4.06□□□□□ -1.76
HMGB1P26-201ENST00000452520 ELL3Q9HB65 397 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P26-201ENST00000452520 POPDC2Q9HBU9 364 aa4.06□□□□□ -1.76
HMGB1P26-201ENST00000452520 PDP1Q9P0J1 537 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P26-201ENST00000452520 IKZF2Q9UKS7 526 aa4.06□□□□□ -1.76
HMGB1P26-201ENST00000452520 CFAP45Q9UL16 551 aa4.06□□□□□ -1.76
HMGB1P26-201ENST00000452520 PACSIN2Q9UNF0 486 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P26-201ENST00000452520 A0A1B0GU03 582 aa4.05□□□□□ -1.76
HMGB1P26-201ENST00000452520 FRG2CA6NGY1 282 aa4.05□□□□□ -1.76
HMGB1P26-201ENST00000452520 ARHGEF33A8MVX0 844 aa4.05□□□□□ -1.76
HMGB1P26-201ENST00000452520 A8MXK9 166 aa4.05□□□□□ -1.76
HMGB1P26-201ENST00000452520 RS1O15537 224 aa4.05□□□□□ -1.76
HMGB1P26-201ENST00000452520 TRIM3O75382 744 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P26-201ENST00000452520 POP4O95707 220 aaKnown RBP4.05□□□□□ -1.76
HMGB1P26-201ENST00000452520 S100A9P06702 114 aaKnown RBP4.05□□□□□ -1.76
HMGB1P26-201ENST00000452520 CPN2P22792 545 aa4.05□□□□□ -1.76
HMGB1P26-201ENST00000452520 GCAP28676 217 aa4.05□□□□□ -1.76
HMGB1P26-201ENST00000452520 CD1CP29017 333 aa4.05□□□□□ -1.76
HMGB1P26-201ENST00000452520 PPP2R1BP30154 601 aa4.05□□□□□ -1.76
HMGB1P26-201ENST00000452520 ATP5C1P36542 298 aaKnown RBP4.05□□□□□ -1.76
HMGB1P26-201ENST00000452520 GYG1P46976 350 aa4.05□□□□□ -1.76
HMGB1P26-201ENST00000452520 QARSP47897 775 aaKnown RBP4.05□□□□□ -1.76
HMGB1P26-201ENST00000452520 HSPA2P54652 639 aa4.05□□□□□ -1.76
HMGB1P26-201ENST00000452520 C21orf59P57076 290 aa4.05□□□□□ -1.76
HMGB1P26-201ENST00000452520 GSTO1P78417 241 aa4.05□□□□□ -1.76
HMGB1P26-201ENST00000452520 CDK16Q00536 496 aa4.05□□□□□ -1.76
HMGB1P26-201ENST00000452520 DNAJC3Q13217 504 aa4.05□□□□□ -1.76
HMGB1P26-201ENST00000452520 VGLL4Q14135 290 aa4.05□□□□□ -1.76
HMGB1P26-201ENST00000452520 CHRNA6Q15825 494 aa4.05□□□□□ -1.76
HMGB1P26-201ENST00000452520 SLC15A2Q16348 729 aa4.05□□□□□ -1.76
HMGB1P26-201ENST00000452520 KLHL38Q2WGJ6 581 aa4.05□□□□□ -1.76
HMGB1P26-201ENST00000452520 HIKESHIQ53FT3 197 aa4.05□□□□□ -1.76
HMGB1P26-201ENST00000452520 DMRTC1Q5HYR2 192 aa4.05□□□□□ -1.76
HMGB1P26-201ENST00000452520 ZNF343Q6P1L6 599 aa4.05□□□□□ -1.76
HMGB1P26-201ENST00000452520 TMEM220Q6QAJ8 160 aa4.05□□□□□ -1.76
HMGB1P26-201ENST00000452520 C19orf35Q6ZS72 473 aa4.05□□□□□ -1.76
HMGB1P26-201ENST00000452520 RFESDQ8TAC1 157 aa4.05□□□□□ -1.76
HMGB1P26-201ENST00000452520 MAGEE2Q8TD90 523 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P26-201ENST00000452520 NPRL2Q8WTW4 380 aa4.05□□□□□ -1.76
HMGB1P26-201ENST00000452520 SLC38A4Q969I6 547 aa4.05□□□□□ -1.76
HMGB1P26-201ENST00000452520 OR5B2Q96R09 309 aa4.05□□□□□ -1.76
HMGB1P26-201ENST00000452520 EHD1Q9H4M9 534 aa4.05□□□□□ -1.76
HMGB1P26-201ENST00000452520 ANKRD19PQ9H560 264 aa4.05□□□□□ -1.76
HMGB1P26-201ENST00000452520 MOB1AQ9H8S9 216 aa4.05□□□□□ -1.76
HMGB1P26-201ENST00000452520 SP140LQ9H930 580 aa4.05□□□□□ -1.76
HMGB1P26-201ENST00000452520 CYP3A43Q9HB55 503 aa4.05□□□□□ -1.76
HMGB1P26-201ENST00000452520 NT5MQ9NPB1 228 aa4.05□□□□□ -1.76
HMGB1P26-201ENST00000452520 VANGL2Q9ULK5 521 aa4.05□□□□□ -1.76
HMGB1P26-201ENST00000452520 TBC1D24Q9ULP9 559 aa4.05□□□□□ -1.76
HMGB1P26-201ENST00000452520 PEX16Q9Y5Y5 336 aa4.05□□□□□ -1.76
HMGB1P26-201ENST00000452520 PLEKHG2Q9H7P9 1386 aa4.04□□□□□ -1.76
HMGB1P26-201ENST00000452520 IGLV4-3A0A075B6K6 122 aa4.04□□□□□ -1.76
HMGB1P26-201ENST00000452520 TRGV8A0A0C4DH27 118 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms