RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 MTHFD2LQ9H903 347 aaPredicted RBP13.2□□□□□ -0.3
USE1-202ENST00000445667 RASSF1Q9NS23 344 aa13.2□□□□□ -0.3
USE1-202ENST00000445667 PROCRQ9UNN8 238 aa13.2□□□□□ -0.3
USE1-202ENST00000445667 PCDHB14Q9Y5E9 798 aa13.2□□□□□ -0.3
USE1-202ENST00000445667 SH3D21A4FU49 640 aa13.19□□□□□ -0.3
USE1-202ENST00000445667 AGAP5A6NIR3 686 aa13.19□□□□□ -0.3
USE1-202ENST00000445667 GJE1A6NN92 205 aa13.19□□□□□ -0.3
USE1-202ENST00000445667 ADAM11O75078 769 aa13.19□□□□□ -0.3
USE1-202ENST00000445667 SS18L1O75177 396 aaPredicted RBP13.19□□□□□ -0.3
USE1-202ENST00000445667 CD8BP10966 210 aa13.19□□□□□ -0.3
USE1-202ENST00000445667 CD1EP15812 388 aa13.19□□□□□ -0.3
USE1-202ENST00000445667 CD79BP40259 229 aa13.19□□□□□ -0.3
USE1-202ENST00000445667 MRPL19P49406 292 aaKnown RBP13.19□□□□□ -0.3
USE1-202ENST00000445667 CTBP2P56545 445 aa13.19□□□□□ -0.3
USE1-202ENST00000445667 SELENBP1Q13228 472 aa13.19□□□□□ -0.3
USE1-202ENST00000445667 ZNF239Q16600 458 aaKnown RBP13.19□□□□□ -0.3
USE1-202ENST00000445667 PLEKHM3Q6ZWE6 761 aa13.19□□□□□ -0.3
USE1-202ENST00000445667 LSRQ86X29 649 aaPredicted RBP13.19□□□□□ -0.3
USE1-202ENST00000445667 ARFGAP2Q8N6H7 521 aa13.19□□□□□ -0.3
USE1-202ENST00000445667 ZNF563Q8TA94 476 aa13.19□□□□□ -0.3
USE1-202ENST00000445667 OIT3Q8WWZ8 545 aa13.19□□□□□ -0.3
USE1-202ENST00000445667 TMEM234Q8WY98 164 aa13.19□□□□□ -0.3
USE1-202ENST00000445667 ST8SIA1Q92185 356 aa13.19□□□□□ -0.3
USE1-202ENST00000445667 CLEC4MQ9H2X3 399 aaPredicted RBP13.19□□□□□ -0.3
USE1-202ENST00000445667 LIME1Q9H400 295 aa13.19□□□□□ -0.3
USE1-202ENST00000445667 TIGARQ9NQ88 270 aa13.19□□□□□ -0.3
USE1-202ENST00000445667 PLSCR4Q9NRQ2 329 aa13.19□□□□□ -0.3
USE1-202ENST00000445667 ACER3Q9NUN7 267 aa13.19□□□□□ -0.3
USE1-202ENST00000445667 CCDC167Q9P0B6 97 aa13.19□□□□□ -0.3
USE1-202ENST00000445667 EMC9Q9Y3B6 208 aa13.19□□□□□ -0.3
USE1-202ENST00000445667 HEATR5AQ86XA9 2040 aa13.18□□□□□ -0.3
USE1-202ENST00000445667 UQCRHLA0A096LP55 91 aa13.18□□□□□ -0.3
USE1-202ENST00000445667 IGHV3-15A0A0B4J1V0 119 aa13.18□□□□□ -0.3
USE1-202ENST00000445667 NR5A2O00482 541 aa13.18□□□□□ -0.3
USE1-202ENST00000445667 AP3D1O14617 1153 aa13.18□□□□□ -0.3
USE1-202ENST00000445667 BCHEP06276 602 aa13.18□□□□□ -0.3
USE1-202ENST00000445667 NID1P14543 1247 aa13.18□□□□□ -0.3
USE1-202ENST00000445667 POU2F1P14859 743 aa13.18□□□□□ -0.3
USE1-202ENST00000445667 IL7RP16871 459 aa13.18□□□□□ -0.3
USE1-202ENST00000445667 SLC7A1P30825 629 aa13.18□□□□□ -0.3
USE1-202ENST00000445667 DSTNP60981 165 aa13.18□□□□□ -0.3
USE1-202ENST00000445667 EXOC3L2Q2M3D2 409 aa13.18□□□□□ -0.3
USE1-202ENST00000445667 AGKQ53H12 422 aa13.18□□□□□ -0.3
USE1-202ENST00000445667 FBXW10Q5XX13 1052 aa13.18□□□□□ -0.3
USE1-202ENST00000445667 GTF2IRD2BQ6EKJ0 949 aa13.18□□□□□ -0.3
USE1-202ENST00000445667 BLOC1S3Q6QNY0 202 aa13.18□□□□□ -0.3
USE1-202ENST00000445667 GTF2IRD2Q86UP8 949 aa13.18□□□□□ -0.3
USE1-202ENST00000445667 CDC20BQ86Y33 519 aa13.18□□□□□ -0.3
USE1-202ENST00000445667 OR6K3Q8NGY3 331 aa13.18□□□□□ -0.3
USE1-202ENST00000445667 ABHD3Q8WU67 409 aa13.18□□□□□ -0.3
USE1-202ENST00000445667 WDR60Q8WVS4 1066 aa13.18□□□□□ -0.3
USE1-202ENST00000445667 CPNE4Q96A23 557 aaPredicted RBP13.18□□□□□ -0.3
USE1-202ENST00000445667 SPDL1Q96EA4 605 aa13.18□□□□□ -0.3
USE1-202ENST00000445667 REXO5Q96IC2 774 aaKnown RBP13.18□□□□□ -0.3
USE1-202ENST00000445667 DACH2Q96NX9 599 aa13.18□□□□□ -0.3
USE1-202ENST00000445667 OR5B2Q96R09 309 aa13.18□□□□□ -0.3
USE1-202ENST00000445667 SLC39A3Q9BRY0 314 aa13.18□□□□□ -0.3
USE1-202ENST00000445667 C12orf49Q9H741 205 aa13.18□□□□□ -0.3
USE1-202ENST00000445667 SLC52A3Q9NQ40 469 aa13.18□□□□□ -0.3
USE1-202ENST00000445667 CTPS2Q9NRF8 586 aa13.18□□□□□ -0.3
USE1-202ENST00000445667 SERINC1Q9NRX5 453 aa13.18□□□□□ -0.3
USE1-202ENST00000445667 SLAMF8Q9P0V8 285 aa13.18□□□□□ -0.3
USE1-202ENST00000445667 P2RX2Q9UBL9 471 aa13.18□□□□□ -0.3
USE1-202ENST00000445667 NDRG3Q9UGV2 375 aa13.18□□□□□ -0.3
USE1-202ENST00000445667 DCTN4Q9UJW0 460 aa13.18□□□□□ -0.3
USE1-202ENST00000445667 CLIC1O00299 241 aa13.17□□□□□ -0.3
USE1-202ENST00000445667 EDF1O60869 148 aaKnown RBP13.17□□□□□ -0.3
USE1-202ENST00000445667 DBIP07108 87 aaKnown RBP13.17□□□□□ -0.3
USE1-202ENST00000445667 NUDT7P0C024 238 aa13.17□□□□□ -0.3
USE1-202ENST00000445667 TFPTP0C1Z6 253 aa13.17□□□□□ -0.3
USE1-202ENST00000445667 HOXB9P17482 250 aaPredicted RBP13.17□□□□□ -0.3
USE1-202ENST00000445667 NCF2P19878 526 aaPredicted RBP13.17□□□□□ -0.3
USE1-202ENST00000445667 KLK2P20151 261 aa13.17□□□□□ -0.3
USE1-202ENST00000445667 RPS4Y1P22090 263 aaKnown RBP13.17□□□□□ -0.3
USE1-202ENST00000445667 ENPP1P22413 925 aa13.17□□□□□ -0.3
USE1-202ENST00000445667 MAGEA8P43361 318 aa13.17□□□□□ -0.3
USE1-202ENST00000445667 IDH2P48735 452 aaKnown RBP13.17□□□□□ -0.3
USE1-202ENST00000445667 POU4F3Q15319 338 aa13.17□□□□□ -0.3
USE1-202ENST00000445667 RGNQ15493 299 aa13.17□□□□□ -0.3
USE1-202ENST00000445667 RPS26P11Q5JNZ5 115 aaPredicted RBP13.17□□□□□ -0.3
USE1-202ENST00000445667 PAGE3Q5JUK9 113 aa13.17□□□□□ -0.3
USE1-202ENST00000445667 MRPL2Q5T653 305 aaKnown RBP13.17□□□□□ -0.3
USE1-202ENST00000445667 ANKRD34AQ69YU3 496 aa13.17□□□□□ -0.3
USE1-202ENST00000445667 C3orf33Q6P1S2 294 aa13.17□□□□□ -0.3
USE1-202ENST00000445667 FCRLAQ7L513 359 aa13.17□□□□□ -0.3
USE1-202ENST00000445667 VRK2Q86Y07 508 aa13.17□□□□□ -0.3
USE1-202ENST00000445667 TUSC5Q8IXB3 177 aa13.17□□□□□ -0.3
USE1-202ENST00000445667 CMIPQ8IY22 773 aa13.17□□□□□ -0.3
USE1-202ENST00000445667 PEX5LQ8IYB4 626 aa13.17□□□□□ -0.3
USE1-202ENST00000445667 RNF128Q8TEB7 428 aa13.17□□□□□ -0.3
USE1-202ENST00000445667 SLC38A5Q8WUX1 472 aa13.17□□□□□ -0.3
USE1-202ENST00000445667 DNAJA3Q96EY1 480 aa13.17□□□□□ -0.3
USE1-202ENST00000445667 WFIKKN1Q96NZ8 548 aa13.17□□□□□ -0.3
USE1-202ENST00000445667 CCDC106Q9BWC9 280 aa13.17□□□□□ -0.3
USE1-202ENST00000445667 KLHL4Q9C0H6 718 aa13.17□□□□□ -0.3
USE1-202ENST00000445667 EXOSC3Q9NQT5 275 aaKnown RBP13.17□□□□□ -0.3
USE1-202ENST00000445667 GLRX2Q9NS18 164 aa13.17□□□□□ -0.3
USE1-202ENST00000445667 RLIMQ9NVW2 624 aa13.17□□□□□ -0.3
USE1-202ENST00000445667 ZNF446Q9NWS9 450 aa13.17□□□□□ -0.3
USE1-202ENST00000445667 KLHL28Q9NXS3 571 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms