RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 ZNF610Q8N9Z0 462 aa16.84■□□□□ 0.29
ATPAF2-201ENST00000444058 ZNF524Q96C55 264 aa16.84■□□□□ 0.29
ATPAF2-201ENST00000444058 ZG16BQ96DA0 208 aa16.84■□□□□ 0.29
ATPAF2-201ENST00000444058 ITCHQ96J02 903 aa16.84■□□□□ 0.29
ATPAF2-201ENST00000444058 MARK4Q96L34 752 aa16.84■□□□□ 0.29
ATPAF2-201ENST00000444058 SLC38A1Q9H2H9 487 aa16.84■□□□□ 0.29
ATPAF2-201ENST00000444058 SLCO1B3Q9NPD5 702 aa16.84■□□□□ 0.29
ATPAF2-201ENST00000444058 FANCFQ9NPI8 374 aa16.84■□□□□ 0.29
ATPAF2-201ENST00000444058 SERINC1Q9NRX5 453 aa16.84■□□□□ 0.29
ATPAF2-201ENST00000444058 ACER3Q9NUN7 267 aa16.84■□□□□ 0.29
ATPAF2-201ENST00000444058 TMEM45AQ9NWC5 275 aa16.84■□□□□ 0.29
ATPAF2-201ENST00000444058 THUMPD1Q9NXG2 353 aaKnown RBP16.84■□□□□ 0.29
ATPAF2-201ENST00000444058 PRDM4Q9UKN5 801 aa16.84■□□□□ 0.29
ATPAF2-201ENST00000444058 ITGB1BP2Q9UKP3 347 aa16.84■□□□□ 0.29
ATPAF2-201ENST00000444058 TESMINQ9Y4I5 508 aa16.84■□□□□ 0.29
ATPAF2-201ENST00000444058 C16orf97H3BN30 126 aa16.83■□□□□ 0.28
ATPAF2-201ENST00000444058 C1QCP02747 245 aa16.83■□□□□ 0.28
ATPAF2-201ENST00000444058 FKBP2P26885 142 aaKnown RBP16.83■□□□□ 0.28
ATPAF2-201ENST00000444058 MVDP53602 400 aa16.83■□□□□ 0.28
ATPAF2-201ENST00000444058 RAC3P60763 192 aa16.83■□□□□ 0.28
ATPAF2-201ENST00000444058 SLC43A2Q8N370 569 aa16.83■□□□□ 0.28
ATPAF2-201ENST00000444058 ANKFN1Q8N957 763 aa16.83■□□□□ 0.28
ATPAF2-201ENST00000444058 SLC25A43Q8WUT9 341 aaPredicted RBP16.83■□□□□ 0.28
ATPAF2-201ENST00000444058 DYDC1Q8WWB3 177 aa16.83■□□□□ 0.28
ATPAF2-201ENST00000444058 CCDC28BQ9BUN5 200 aa16.83■□□□□ 0.28
ATPAF2-201ENST00000444058 COQ10BQ9H8M1 238 aa16.83■□□□□ 0.28
ATPAF2-201ENST00000444058 TPT1P8Q9HAU6 139 aa16.83■□□□□ 0.28
ATPAF2-201ENST00000444058 ANP32DO95626 131 aa16.82■□□□□ 0.28
ATPAF2-201ENST00000444058 HRGP04196 525 aa16.82■□□□□ 0.28
ATPAF2-201ENST00000444058 RPS4Y1P22090 263 aaKnown RBP16.82■□□□□ 0.28
ATPAF2-201ENST00000444058 SLC7A1P30825 629 aa16.82■□□□□ 0.28
ATPAF2-201ENST00000444058 APOBEC1P41238 236 aaKnown RBP16.82■□□□□ 0.28
ATPAF2-201ENST00000444058 KCNJ5P48544 419 aa16.82■□□□□ 0.28
ATPAF2-201ENST00000444058 IDH3AP50213 366 aa16.82■□□□□ 0.28
ATPAF2-201ENST00000444058 STX1BP61266 288 aa16.82■□□□□ 0.28
ATPAF2-201ENST00000444058 GNA13Q14344 377 aa16.82■□□□□ 0.28
ATPAF2-201ENST00000444058 SYPL1Q16563 259 aa16.82■□□□□ 0.28
ATPAF2-201ENST00000444058 COX20Q5RI15 118 aa16.82■□□□□ 0.28
ATPAF2-201ENST00000444058 STK32CQ86UX6 486 aa16.82■□□□□ 0.28
ATPAF2-201ENST00000444058 OR9I1Q8NGQ6 314 aa16.82■□□□□ 0.28
ATPAF2-201ENST00000444058 STON2Q8WXE9 905 aa16.82■□□□□ 0.28
ATPAF2-201ENST00000444058 TACO1Q9BSH4 297 aaKnown RBP16.82■□□□□ 0.28
ATPAF2-201ENST00000444058 SRXN1Q9BYN0 137 aa16.82■□□□□ 0.28
ATPAF2-201ENST00000444058 SLC6A13Q9NSD5 602 aa16.82■□□□□ 0.28
ATPAF2-201ENST00000444058 INTS9Q9NV88 658 aaKnown RBP16.82■□□□□ 0.28
ATPAF2-201ENST00000444058 ZNF226Q9NYT6 803 aa16.82■□□□□ 0.28
ATPAF2-201ENST00000444058 CALML5Q9NZT1 146 aa16.82■□□□□ 0.28
ATPAF2-201ENST00000444058 ST6GALNAC2Q9UJ37 374 aa16.82■□□□□ 0.28
ATPAF2-201ENST00000444058 ABCA4P78363 2273 aa16.82■□□□□ 0.28
ATPAF2-201ENST00000444058 HEATR5AQ86XA9 2040 aa16.81■□□□□ 0.28
ATPAF2-201ENST00000444058 UQCRHLA0A096LP55 91 aa16.81■□□□□ 0.28
ATPAF2-201ENST00000444058 PRKD3O94806 890 aa16.81■□□□□ 0.28
ATPAF2-201ENST00000444058 DBIP07108 87 aaKnown RBP16.81■□□□□ 0.28
ATPAF2-201ENST00000444058 CHRM4P08173 479 aa16.81■□□□□ 0.28
ATPAF2-201ENST00000444058 NR2F1P10589 423 aa16.81■□□□□ 0.28
ATPAF2-201ENST00000444058 PPP3CBP16298 524 aa16.81■□□□□ 0.28
ATPAF2-201ENST00000444058 AGTR1P30556 359 aa16.81■□□□□ 0.28
ATPAF2-201ENST00000444058 PPP2R2AP63151 447 aa16.81■□□□□ 0.28
ATPAF2-201ENST00000444058 FBXW10Q5XX13 1052 aa16.81■□□□□ 0.28
ATPAF2-201ENST00000444058 BEND4Q6ZU67 534 aa16.81■□□□□ 0.28
ATPAF2-201ENST00000444058 PLEKHM3Q6ZWE6 761 aa16.81■□□□□ 0.28
ATPAF2-201ENST00000444058 FCRLAQ7L513 359 aa16.81■□□□□ 0.28
ATPAF2-201ENST00000444058 GRINAQ7Z429 371 aa16.81■□□□□ 0.28
ATPAF2-201ENST00000444058 ARFGAP2Q8N6H7 521 aa16.81■□□□□ 0.28
ATPAF2-201ENST00000444058 PNPT1Q8TCS8 783 aaKnown RBP16.81■□□□□ 0.28
ATPAF2-201ENST00000444058 ROBO4Q8WZ75 1007 aa16.81■□□□□ 0.28
ATPAF2-201ENST00000444058 NRGNQ92686 78 aa16.81■□□□□ 0.28
ATPAF2-201ENST00000444058 VPS33AQ96AX1 596 aa16.81■□□□□ 0.28
ATPAF2-201ENST00000444058 WFIKKN1Q96NZ8 548 aa16.81■□□□□ 0.28
ATPAF2-201ENST00000444058 CCDC106Q9BWC9 280 aa16.81■□□□□ 0.28
ATPAF2-201ENST00000444058 QRSL1Q9H0R6 528 aaKnown RBP16.81■□□□□ 0.28
ATPAF2-201ENST00000444058 KLHL13Q9P2N7 655 aa16.81■□□□□ 0.28
ATPAF2-201ENST00000444058 P2RX2Q9UBL9 471 aa16.81■□□□□ 0.28
ATPAF2-201ENST00000444058 CLEC4AQ9UMR7 237 aa16.81■□□□□ 0.28
ATPAF2-201ENST00000444058 SPIN1Q9Y657 262 aaPredicted RBP16.81■□□□□ 0.28
ATPAF2-201ENST00000444058 DSPPQ9NZW4 1301 aa16.8■□□□□ 0.28
ATPAF2-201ENST00000444058 FAAHO00519 579 aa16.8■□□□□ 0.28
ATPAF2-201ENST00000444058 BCAS1O75363 584 aaPredicted RBP16.8■□□□□ 0.28
ATPAF2-201ENST00000444058 TFPTP0C1Z6 253 aa16.8■□□□□ 0.28
ATPAF2-201ENST00000444058 CD1EP15812 388 aa16.8■□□□□ 0.28
ATPAF2-201ENST00000444058 IL7RP16871 459 aa16.8■□□□□ 0.28
ATPAF2-201ENST00000444058 CCKARP32238 428 aa16.8■□□□□ 0.28
ATPAF2-201ENST00000444058 HTR3AP46098 478 aa16.8■□□□□ 0.28
ATPAF2-201ENST00000444058 CLK1P49759 484 aaKnown RBP16.8■□□□□ 0.28
ATPAF2-201ENST00000444058 MAP2K6P52564 334 aa16.8■□□□□ 0.28
ATPAF2-201ENST00000444058 IST1P53990 364 aa16.8■□□□□ 0.28
ATPAF2-201ENST00000444058 AQP5P55064 265 aa16.8■□□□□ 0.28
ATPAF2-201ENST00000444058 PLAURQ03405 335 aa16.8■□□□□ 0.28
ATPAF2-201ENST00000444058 MERTKQ12866 999 aa16.8■□□□□ 0.28
ATPAF2-201ENST00000444058 TMEM201Q5SNT2 666 aa16.8■□□□□ 0.28
ATPAF2-201ENST00000444058 C6orf10Q5SRN2 563 aa16.8■□□□□ 0.28
ATPAF2-201ENST00000444058 DNAJC14Q6Y2X3 702 aaPredicted RBP16.8■□□□□ 0.28
ATPAF2-201ENST00000444058 ATP6V1C2Q8NEY4 427 aa16.8■□□□□ 0.28
ATPAF2-201ENST00000444058 ZNF563Q8TA94 476 aa16.8■□□□□ 0.28
ATPAF2-201ENST00000444058 ABHD3Q8WU67 409 aa16.8■□□□□ 0.28
ATPAF2-201ENST00000444058 GTF2H4Q92759 462 aa16.8■□□□□ 0.28
ATPAF2-201ENST00000444058 FOXC2Q99958 501 aa16.8■□□□□ 0.28
ATPAF2-201ENST00000444058 MED18Q9BUE0 208 aa16.8■□□□□ 0.28
ATPAF2-201ENST00000444058 OR10A4Q9H209 315 aa16.8■□□□□ 0.28
ATPAF2-201ENST00000444058 PLEKHF2Q9H8W4 249 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms