RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 SLC2A7Q6PXP3 512 aa18.84■□□□□ 0.61
CDKN3-204ENST00000442975 ARFGAP2Q8N6H7 521 aa18.84■□□□□ 0.61
CDKN3-204ENST00000442975 ZNF610Q8N9Z0 462 aa18.84■□□□□ 0.61
CDKN3-204ENST00000442975 FAM71CQ8NEG0 241 aa18.84■□□□□ 0.61
CDKN3-204ENST00000442975 OR6K3Q8NGY3 331 aa18.84■□□□□ 0.61
CDKN3-204ENST00000442975 ABHD3Q8WU67 409 aa18.84■□□□□ 0.61
CDKN3-204ENST00000442975 TMEM234Q8WY98 164 aa18.84■□□□□ 0.61
CDKN3-204ENST00000442975 CPNE4Q96A23 557 aaPredicted RBP18.84■□□□□ 0.61
CDKN3-204ENST00000442975 DACH2Q96NX9 599 aa18.84■□□□□ 0.61
CDKN3-204ENST00000442975 SLC38A1Q9H2H9 487 aa18.84■□□□□ 0.61
CDKN3-204ENST00000442975 COQ10BQ9H8M1 238 aa18.84■□□□□ 0.61
CDKN3-204ENST00000442975 TPT1P8Q9HAU6 139 aa18.84■□□□□ 0.61
CDKN3-204ENST00000442975 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.84■□□□□ 0.61
CDKN3-204ENST00000442975 KLHL28Q9NXS3 571 aa18.84■□□□□ 0.61
CDKN3-204ENST00000442975 NDRG3Q9UGV2 375 aa18.84■□□□□ 0.61
CDKN3-204ENST00000442975 A0A1W2PNR3 127 aa18.83■□□□□ 0.6
CDKN3-204ENST00000442975 SASH3O75995 380 aa18.83■□□□□ 0.6
CDKN3-204ENST00000442975 CGAP01215 116 aa18.83■□□□□ 0.6
CDKN3-204ENST00000442975 PABPC4LP0CB38 370 aaKnown RBP18.83■□□□□ 0.6
CDKN3-204ENST00000442975 CCKARP32238 428 aa18.83■□□□□ 0.6
CDKN3-204ENST00000442975 KCNJ10P78508 379 aa18.83■□□□□ 0.6
CDKN3-204ENST00000442975 GNA13Q14344 377 aa18.83■□□□□ 0.6
CDKN3-204ENST00000442975 DAZAP2Q15038 168 aaPredicted RBP18.83■□□□□ 0.6
CDKN3-204ENST00000442975 LRRC74BQ6ZQY2 392 aa18.83■□□□□ 0.6
CDKN3-204ENST00000442975 RNF128Q8TEB7 428 aa18.83■□□□□ 0.6
CDKN3-204ENST00000442975 WDR60Q8WVS4 1066 aa18.83■□□□□ 0.6
CDKN3-204ENST00000442975 THOC1Q96FV9 657 aaKnown RBP18.83■□□□□ 0.6
CDKN3-204ENST00000442975 OR5B2Q96R09 309 aa18.83■□□□□ 0.6
CDKN3-204ENST00000442975 CCDC28BQ9BUN5 200 aa18.83■□□□□ 0.6
CDKN3-204ENST00000442975 C12orf49Q9H741 205 aa18.83■□□□□ 0.6
CDKN3-204ENST00000442975 SERINC1Q9NRX5 453 aa18.83■□□□□ 0.6
CDKN3-204ENST00000442975 TESMINQ9Y4I5 508 aa18.83■□□□□ 0.6
CDKN3-204ENST00000442975 ANKRD17O75179 2603 aaKnown RBP18.82■□□□□ 0.6
CDKN3-204ENST00000442975 NUP214P35658 2090 aaPredicted RBP18.82■□□□□ 0.6
CDKN3-204ENST00000442975 IGHV3-15A0A0B4J1V0 119 aa18.82■□□□□ 0.6
CDKN3-204ENST00000442975 AGAP5A6NIR3 686 aa18.82■□□□□ 0.6
CDKN3-204ENST00000442975 ETV2O00321 342 aaPredicted RBP18.82■□□□□ 0.6
CDKN3-204ENST00000442975 CASKO14936 926 aa18.82■□□□□ 0.6
CDKN3-204ENST00000442975 BCHEP06276 602 aa18.82■□□□□ 0.6
CDKN3-204ENST00000442975 ZCCHC18P0CG32 403 aa18.82■□□□□ 0.6
CDKN3-204ENST00000442975 AGTR1P30556 359 aa18.82■□□□□ 0.6
CDKN3-204ENST00000442975 UGT2B10P36537 528 aa18.82■□□□□ 0.6
CDKN3-204ENST00000442975 DSTNP60981 165 aa18.82■□□□□ 0.6
CDKN3-204ENST00000442975 PLAURQ03405 335 aa18.82■□□□□ 0.6
CDKN3-204ENST00000442975 PLEKHM3Q6ZWE6 761 aa18.82■□□□□ 0.6
CDKN3-204ENST00000442975 CDC20BQ86Y33 519 aa18.82■□□□□ 0.6
CDKN3-204ENST00000442975 CKAP2Q8WWK9 683 aa18.82■□□□□ 0.6
CDKN3-204ENST00000442975 CNOT9Q92600 299 aaKnown RBP18.82■□□□□ 0.6
CDKN3-204ENST00000442975 MAGEB18Q96M61 343 aa18.82■□□□□ 0.6
CDKN3-204ENST00000442975 MED18Q9BUE0 208 aa18.82■□□□□ 0.6
CDKN3-204ENST00000442975 KLHL4Q9C0H6 718 aa18.82■□□□□ 0.6
CDKN3-204ENST00000442975 GLRX2Q9NS18 164 aa18.82■□□□□ 0.6
CDKN3-204ENST00000442975 ACER3Q9NUN7 267 aa18.82■□□□□ 0.6
CDKN3-204ENST00000442975 ELOVL5Q9NYP7 299 aa18.82■□□□□ 0.6
CDKN3-204ENST00000442975 DNAJA2O60884 412 aa18.81■□□□□ 0.6
CDKN3-204ENST00000442975 IL7RP16871 459 aa18.81■□□□□ 0.6
CDKN3-204ENST00000442975 DNAJA1P31689 397 aaKnown RBP18.81■□□□□ 0.6
CDKN3-204ENST00000442975 MAGEA8P43361 318 aa18.81■□□□□ 0.6
CDKN3-204ENST00000442975 MVDP53602 400 aa18.81■□□□□ 0.6
CDKN3-204ENST00000442975 GTF2IRD2BQ6EKJ0 949 aa18.81■□□□□ 0.6
CDKN3-204ENST00000442975 FCRLAQ7L513 359 aa18.81■□□□□ 0.6
CDKN3-204ENST00000442975 ZNF550Q7Z398 422 aa18.81■□□□□ 0.6
CDKN3-204ENST00000442975 GTF2IRD2Q86UP8 949 aa18.81■□□□□ 0.6
CDKN3-204ENST00000442975 GTF2H4Q92759 462 aa18.81■□□□□ 0.6
CDKN3-204ENST00000442975 EXOSC3Q9NQT5 275 aaKnown RBP18.81■□□□□ 0.6
CDKN3-204ENST00000442975 CCDC167Q9P0B6 97 aa18.81■□□□□ 0.6
CDKN3-204ENST00000442975 SPIN1Q9Y657 262 aaPredicted RBP18.81■□□□□ 0.6
CDKN3-204ENST00000442975 SPG11Q96JI7 2443 aa18.8■□□□□ 0.6
CDKN3-204ENST00000442975 FAM221AA4D161 298 aa18.8■□□□□ 0.6
CDKN3-204ENST00000442975 TMEM247A6NEH6 219 aa18.8■□□□□ 0.6
CDKN3-204ENST00000442975 C16orf97H3BN30 126 aa18.8■□□□□ 0.6
CDKN3-204ENST00000442975 AP3D1O14617 1153 aa18.8■□□□□ 0.6
CDKN3-204ENST00000442975 DBIP07108 87 aaKnown RBP18.8■□□□□ 0.6
CDKN3-204ENST00000442975 TFPIP10646 304 aa18.8■□□□□ 0.6
CDKN3-204ENST00000442975 ENPP1P22413 925 aa18.8■□□□□ 0.6
CDKN3-204ENST00000442975 CRISP3P54108 245 aa18.8■□□□□ 0.6
CDKN3-204ENST00000442975 RNPS1Q15287 305 aaKnown RBP18.8■□□□□ 0.6
CDKN3-204ENST00000442975 SYT14P1Q58G82 188 aa18.8■□□□□ 0.6
CDKN3-204ENST00000442975 RPS26P11Q5JNZ5 115 aaPredicted RBP18.8■□□□□ 0.6
CDKN3-204ENST00000442975 TMEM201Q5SNT2 666 aa18.8■□□□□ 0.6
CDKN3-204ENST00000442975 MRPL2Q5T653 305 aaKnown RBP18.8■□□□□ 0.6
CDKN3-204ENST00000442975 GRINAQ7Z429 371 aa18.8■□□□□ 0.6
CDKN3-204ENST00000442975 STK32CQ86UX6 486 aa18.8■□□□□ 0.6
CDKN3-204ENST00000442975 CMIPQ8IY22 773 aa18.8■□□□□ 0.6
CDKN3-204ENST00000442975 PEX5LQ8IYB4 626 aa18.8■□□□□ 0.6
CDKN3-204ENST00000442975 SPDL1Q96EA4 605 aa18.8■□□□□ 0.6
CDKN3-204ENST00000442975 DNAJA3Q96EY1 480 aa18.8■□□□□ 0.6
CDKN3-204ENST00000442975 TMEM19Q96HH6 336 aa18.8■□□□□ 0.6
CDKN3-204ENST00000442975 LIME1Q9H400 295 aa18.8■□□□□ 0.6
CDKN3-204ENST00000442975 MTHFD2LQ9H903 347 aaPredicted RBP18.8■□□□□ 0.6
CDKN3-204ENST00000442975 CACYBPQ9HB71 228 aaKnown RBP18.8■□□□□ 0.6
CDKN3-204ENST00000442975 CTPS2Q9NRF8 586 aa18.8■□□□□ 0.6
CDKN3-204ENST00000442975 KLHL13Q9P2N7 655 aa18.8■□□□□ 0.6
CDKN3-204ENST00000442975 ADAM11O75078 769 aa18.79■□□□□ 0.6
CDKN3-204ENST00000442975 NID1P14543 1247 aa18.79■□□□□ 0.6
CDKN3-204ENST00000442975 CCNA2P20248 432 aa18.79■□□□□ 0.6
CDKN3-204ENST00000442975 RPS4Y1P22090 263 aaKnown RBP18.79■□□□□ 0.6
CDKN3-204ENST00000442975 IDH2P48735 452 aaKnown RBP18.79■□□□□ 0.6
CDKN3-204ENST00000442975 MRPL19P49406 292 aaKnown RBP18.79■□□□□ 0.6
CDKN3-204ENST00000442975 SQLEQ14534 574 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms