RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 PGGHGQ32M88 737 aa11.04□□□□□ -0.64
LTBR-203ENST00000441074 ARL9Q6T311 187 aa11.04□□□□□ -0.64
LTBR-203ENST00000441074 C17orf107Q6ZR85 190 aa11.04□□□□□ -0.64
LTBR-203ENST00000441074 NRSN1Q8IZ57 195 aa11.04□□□□□ -0.64
LTBR-203ENST00000441074 ZNF454Q8N9F8 522 aa11.04□□□□□ -0.64
LTBR-203ENST00000441074 OR51G2Q8NGK0 314 aa11.04□□□□□ -0.64
LTBR-203ENST00000441074 OR9A1PQ8NGU1 263 aa11.04□□□□□ -0.64
LTBR-203ENST00000441074 BBS10Q8TAM1 723 aa11.04□□□□□ -0.64
LTBR-203ENST00000441074 XAGE5Q8WWM1 108 aa11.04□□□□□ -0.64
LTBR-203ENST00000441074 NR4A3Q92570 626 aa11.04□□□□□ -0.64
LTBR-203ENST00000441074 KAT2AQ92830 837 aa11.04□□□□□ -0.64
LTBR-203ENST00000441074 MRPS24Q96EL2 167 aaKnown RBP11.04□□□□□ -0.64
LTBR-203ENST00000441074 FAM46AQ96IP4 442 aaKnown RBP11.04□□□□□ -0.64
LTBR-203ENST00000441074 ZCCHC2Q9C0B9 1178 aaKnown RBP11.04□□□□□ -0.64
LTBR-203ENST00000441074 FN3KQ9H479 309 aa11.04□□□□□ -0.64
LTBR-203ENST00000441074 CPNE7Q9UBL6 633 aa11.04□□□□□ -0.64
LTBR-203ENST00000441074 KLF15Q9UIH9 416 aa11.04□□□□□ -0.64
LTBR-203ENST00000441074 CLEC4AQ9UMR7 237 aa11.04□□□□□ -0.64
LTBR-203ENST00000441074 KIF26AQ9ULI4 1882 aaPredicted RBP11.04□□□□□ -0.64
LTBR-203ENST00000441074 LAMA1P25391 3075 aa11.04□□□□□ -0.64
LTBR-203ENST00000441074 HMSDA8MTL9 139 aa11.04□□□□□ -0.64
LTBR-203ENST00000441074 PRR23D1E9PI22 279 aaPredicted RBP11.04□□□□□ -0.64
LTBR-203ENST00000441074 SC5DO75845 299 aa11.04□□□□□ -0.64
LTBR-203ENST00000441074 PLATP00750 562 aa11.04□□□□□ -0.64
LTBR-203ENST00000441074 APOC3P02656 99 aa11.04□□□□□ -0.64
LTBR-203ENST00000441074 ADRB1P08588 477 aa11.04□□□□□ -0.64
LTBR-203ENST00000441074 PRR23D2P0DMB1 279 aaPredicted RBP11.04□□□□□ -0.64
LTBR-203ENST00000441074 XPAP23025 273 aaPredicted RBP11.04□□□□□ -0.64
LTBR-203ENST00000441074 GJA4P35212 333 aa11.04□□□□□ -0.64
LTBR-203ENST00000441074 FRKP42685 505 aaPredicted RBP11.04□□□□□ -0.64
LTBR-203ENST00000441074 MAZP56270 477 aaKnown RBP11.04□□□□□ -0.64
LTBR-203ENST00000441074 PCBP4P57723 403 aaKnown RBP11.04□□□□□ -0.64
LTBR-203ENST00000441074 PSMA6P60900 246 aaKnown RBP11.04□□□□□ -0.64
LTBR-203ENST00000441074 SEC61A1P61619 476 aaKnown RBP11.04□□□□□ -0.64
LTBR-203ENST00000441074 E2F1Q01094 437 aa11.04□□□□□ -0.64
LTBR-203ENST00000441074 ZNF234Q14588 700 aa11.04□□□□□ -0.64
LTBR-203ENST00000441074 TRAM2Q15035 370 aa11.04□□□□□ -0.64
LTBR-203ENST00000441074 ZNF658BQ4V348 819 aaPredicted RBP11.04□□□□□ -0.64
LTBR-203ENST00000441074 PABPC1L2AQ5JQF8 200 aa11.04□□□□□ -0.64
LTBR-203ENST00000441074 TMEM220Q6QAJ8 160 aa11.04□□□□□ -0.64
LTBR-203ENST00000441074 GLDNQ6ZMI3 551 aaPredicted RBP11.04□□□□□ -0.64
LTBR-203ENST00000441074 TMUB2Q71RG4 321 aa11.04□□□□□ -0.64
LTBR-203ENST00000441074 PARS2Q7L3T8 475 aaKnown RBP11.04□□□□□ -0.64
LTBR-203ENST00000441074 CXXC5Q7LFL8 322 aaKnown RBP11.04□□□□□ -0.64
LTBR-203ENST00000441074 CPOQ8IVL8 374 aa11.04□□□□□ -0.64
LTBR-203ENST00000441074 KRT78Q8N1N4 520 aa11.04□□□□□ -0.64
LTBR-203ENST00000441074 LILRA3Q8N6C8 439 aaPredicted RBP11.04□□□□□ -0.64
LTBR-203ENST00000441074 OR1S1Q8NH92 325 aa11.04□□□□□ -0.64
LTBR-203ENST00000441074 PIGXQ8TBF5 258 aa11.04□□□□□ -0.64
LTBR-203ENST00000441074 SETD7Q8WTS6 366 aaKnown RBP11.04□□□□□ -0.64
LTBR-203ENST00000441074 ELP4Q96EB1 424 aa11.04□□□□□ -0.64
LTBR-203ENST00000441074 SLC38A3Q99624 504 aa11.04□□□□□ -0.64
LTBR-203ENST00000441074 OR10A4Q9H209 315 aa11.04□□□□□ -0.64
LTBR-203ENST00000441074 PLEKHA1Q9HB21 404 aa11.04□□□□□ -0.64
LTBR-203ENST00000441074 ZNF304Q9HCX3 659 aa11.04□□□□□ -0.64
LTBR-203ENST00000441074 BCL2L10Q9HD36 194 aa11.04□□□□□ -0.64
LTBR-203ENST00000441074 HRASLSQ9HDD0 168 aa11.04□□□□□ -0.64
LTBR-203ENST00000441074 HINT3Q9NQE9 182 aaKnown RBP11.04□□□□□ -0.64
LTBR-203ENST00000441074 CA10Q9NS85 328 aa11.04□□□□□ -0.64
LTBR-203ENST00000441074 TEX10Q9NXF1 929 aaPredicted RBP11.04□□□□□ -0.64
LTBR-203ENST00000441074 GPR160Q9UJ42 338 aa11.04□□□□□ -0.64
LTBR-203ENST00000441074 FBXL3Q9UKT7 428 aa11.04□□□□□ -0.64
LTBR-203ENST00000441074 SSUH2Q9Y2M2 353 aa11.04□□□□□ -0.64
LTBR-203ENST00000441074 HIST1H2ABP04908 130 aa11.03□□□□□ -0.64
LTBR-203ENST00000441074 SNRPBP14678 240 aaKnown RBP11.03□□□□□ -0.64
LTBR-203ENST00000441074 FPR3P25089 353 aa11.03□□□□□ -0.64
LTBR-203ENST00000441074 PBLDP30039 288 aaPredicted RBP11.03□□□□□ -0.64
LTBR-203ENST00000441074 GDI1P31150 447 aa11.03□□□□□ -0.64
LTBR-203ENST00000441074 TAS2R41P59536 307 aa11.03□□□□□ -0.64
LTBR-203ENST00000441074 MEF2AQ02078 507 aaPredicted RBP11.03□□□□□ -0.64
LTBR-203ENST00000441074 GK2Q14410 553 aaPredicted RBP11.03□□□□□ -0.64
LTBR-203ENST00000441074 MAPK14Q16539 360 aa11.03□□□□□ -0.64
LTBR-203ENST00000441074 C9orf64Q5T6V5 341 aa11.03□□□□□ -0.64
LTBR-203ENST00000441074 HIST3H2AQ7L7L0 130 aa11.03□□□□□ -0.64
LTBR-203ENST00000441074 PRSS45Q7RTY3 260 aa11.03□□□□□ -0.64
LTBR-203ENST00000441074 GID4Q8IVV7 300 aa11.03□□□□□ -0.64
LTBR-203ENST00000441074 MAFAQ8NHW3 353 aaPredicted RBP11.03□□□□□ -0.64
LTBR-203ENST00000441074 HIST1H2ACQ93077 130 aa11.03□□□□□ -0.64
LTBR-203ENST00000441074 TM4SF18Q96CE8 201 aa11.03□□□□□ -0.64
LTBR-203ENST00000441074 ZNF764Q96H86 408 aaPredicted RBP11.03□□□□□ -0.64
LTBR-203ENST00000441074 SEC22CQ9BRL7 303 aa11.03□□□□□ -0.64
LTBR-203ENST00000441074 YIPF4Q9BSR8 244 aa11.03□□□□□ -0.64
LTBR-203ENST00000441074 ZCCHC4Q9H5U6 513 aa11.03□□□□□ -0.64
LTBR-203ENST00000441074 KCNK12Q9HB15 430 aa11.03□□□□□ -0.64
LTBR-203ENST00000441074 KLHL1Q9NR64 748 aa11.03□□□□□ -0.64
LTBR-203ENST00000441074 DZANK1Q9NVP4 752 aa11.03□□□□□ -0.64
LTBR-203ENST00000441074 AKAP7Q9P0M2 348 aaPredicted RBP11.03□□□□□ -0.64
LTBR-203ENST00000441074 F5P12259 2224 aa11.03□□□□□ -0.64
LTBR-203ENST00000441074 K7ESM1 405 aa11.03□□□□□ -0.64
LTBR-203ENST00000441074 SIGLEC6O43699 453 aa11.03□□□□□ -0.64
LTBR-203ENST00000441074 SDC3O75056 442 aa11.03□□□□□ -0.64
LTBR-203ENST00000441074 SLC2A10O95528 541 aa11.03□□□□□ -0.64
LTBR-203ENST00000441074 ECDO95905 644 aaPredicted RBP11.03□□□□□ -0.64
LTBR-203ENST00000441074 MT-ND5P03915 603 aa11.03□□□□□ -0.64
LTBR-203ENST00000441074 ASGR2P07307 311 aa11.03□□□□□ -0.64
LTBR-203ENST00000441074 TBXA2RP21731 343 aa11.03□□□□□ -0.64
LTBR-203ENST00000441074 PAICSP22234 425 aaKnown RBP11.03□□□□□ -0.64
LTBR-203ENST00000441074 PDHA2P29803 388 aa11.03□□□□□ -0.64
LTBR-203ENST00000441074 BUD31P41223 144 aaPredicted RBP11.03□□□□□ -0.64
LTBR-203ENST00000441074 RAD52P43351 418 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms