RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 ANKDD1AQ495B1 522 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 SPDYE7PQ495Y7 208 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 SPANXN2Q5MJ10 180 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 EXOSC6Q5RKV6 272 aaKnown RBP4.39□□□□□ -1.71
EDEM3-203ENST00000439962 ATAD3BQ5T9A4 648 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 ZNF425Q6IV72 752 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 RHBDD2Q6NTF9 364 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 SLC48A1Q6P1K1 146 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 ANGPTL8Q6UXH0 198 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 ASB18Q6ZVZ8 466 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 ASPGQ86U10 573 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 PAQR7Q86WK9 346 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 LYSMD2Q8IV50 215 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 RNF113BQ8IZP6 322 aaKnown RBP4.39□□□□□ -1.71
EDEM3-203ENST00000439962 ZNF843Q8N446 348 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 GPR32P1Q8NGA4 272 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 OR51Q1Q8NH59 317 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 AP3S1Q92572 193 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 OTUB1Q96FW1 271 aaPredicted RBP4.39□□□□□ -1.71
EDEM3-203ENST00000439962 THOC3Q96J01 351 aaKnown RBP4.39□□□□□ -1.71
EDEM3-203ENST00000439962 PTCHD1Q96NR3 888 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 ZPBPQ9BS86 351 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 TRAF4Q9BUZ4 470 aaPredicted RBP4.39□□□□□ -1.71
EDEM3-203ENST00000439962 NUDT9Q9BW91 350 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 CDADC1Q9BWV3 514 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 FN3KQ9H479 309 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 SLAMF7Q9NQ25 335 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 INPP5EQ9NRR6 644 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 RASSF1Q9NS23 344 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 KLHL28Q9NXS3 571 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 GPR83Q9NYM4 423 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 RABL2AQ9UBK7 228 aaPredicted RBP4.39□□□□□ -1.71
EDEM3-203ENST00000439962 DKK4Q9UBT3 224 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 TESQ9UGI8 421 aaKnown RBP4.39□□□□□ -1.71
EDEM3-203ENST00000439962 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.39□□□□□ -1.71
EDEM3-203ENST00000439962 A4GNTQ9UNA3 340 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 RABL2BQ9UNT1 228 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 ENTPD4Q9Y227 616 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 ASB4Q9Y574 426 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 CELSR1Q9NYQ6 3014 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 TTC36A6NLP5 189 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 MKRN2OSH3BPM6 223 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 FFAR1O14842 300 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 PCDH17O14917 1159 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 PRODHO43272 600 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 CHST10O43529 356 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 DIRAS1O95057 198 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 APOA1P02647 267 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 UMODP07911 640 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 C8orf89P0DMQ9 161 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 ACP2P11117 423 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 DBTP11182 482 aaKnown RBP4.39□□□□□ -1.71
EDEM3-203ENST00000439962 HIST1H1TP22492 207 aaPredicted RBP4.39□□□□□ -1.71
EDEM3-203ENST00000439962 TCEA1P23193 301 aaKnown RBP4.39□□□□□ -1.71
EDEM3-203ENST00000439962 FPR3P25089 353 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 EPHA2P29317 976 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 RORAP35398 523 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 GSSP48637 474 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 PCYT1AP49585 367 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 RORCP51449 518 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 EFNA3P52797 238 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 EMP2P54851 167 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 LIM2P55344 173 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 NCS1P62166 190 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 MC1RQ01726 317 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 OC90Q02509 493 aaPredicted RBP4.39□□□□□ -1.71
EDEM3-203ENST00000439962 PIGFQ07326 219 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 ST3GAL3Q11203 375 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 SLC13A2Q13183 592 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 TPBGQ13641 420 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 SPHARQ15513 63 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 TRAM1Q15629 374 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 EIF2S3LQ2VIR3 472 aaKnown RBP4.39□□□□□ -1.71
EDEM3-203ENST00000439962 ABHD17CQ6PCB6 329 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 UBE3DQ7Z6J8 389 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 LSRQ86X29 649 aaPredicted RBP4.39□□□□□ -1.71
EDEM3-203ENST00000439962 KMT5CQ86Y97 462 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 CISD2Q8N5K1 135 aaKnown RBP4.39□□□□□ -1.71
EDEM3-203ENST00000439962 MORN4Q8NDC4 146 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 OR5M3Q8NGP4 307 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 TMEM163Q8TC26 289 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 OSTF1Q92882 214 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 UCN3Q969E3 161 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 MS4A6EQ96DS6 147 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 SLC38A2Q96QD8 506 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 TREX2Q9BQ50 279 aaPredicted RBP4.39□□□□□ -1.71
EDEM3-203ENST00000439962 FNDC11Q9BVV2 318 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 RAB33BQ9H082 229 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 SLC25A18Q9H1K4 315 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 CACYBPQ9HB71 228 aaKnown RBP4.39□□□□□ -1.71
EDEM3-203ENST00000439962 LYRM4Q9HD34 91 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 MAN2C1Q9NTJ4 1040 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 C14orf105Q9NVL8 296 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 RHBDL2Q9NX52 303 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 CES1P1Q9UKY3 287 aa4.39□□□□□ -1.71
EDEM3-203ENST00000439962 A0A087WV62 115 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 J3QRK9 145 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 DSCR3O14972 297 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 FOXS1O43638 330 aa4.38□□□□□ -1.71
EDEM3-203ENST00000439962 TRIM3O75382 744 aaPredicted RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms