RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 TEX12Q9BXU0 123 aa7.95□□□□□ -1.14
HPS4-206ENST00000439453 SLC6A17Q9H1V8 727 aa7.95□□□□□ -1.14
HPS4-206ENST00000439453 WDR26Q9H7D7 661 aa7.95□□□□□ -1.14
HPS4-206ENST00000439453 KLHL1Q9NR64 748 aa7.95□□□□□ -1.14
HPS4-206ENST00000439453 MGAT4CQ9UBM8 478 aa7.95□□□□□ -1.14
HPS4-206ENST00000439453 TRPC4Q9UBN4 977 aa7.95□□□□□ -1.14
HPS4-206ENST00000439453 ADAMTS9Q9P2N4 1935 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 TMEM131Q92545 1883 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 TCRBV16S1A1N1A0A5B0 115 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 J3QRE1 110 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 PDCD5O14737 125 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 PGRMC2O15173 223 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 FGF2P09038 288 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 RAB3AP20336 220 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 TBXA2RP21731 343 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 XPAP23025 273 aaPredicted RBP7.94□□□□□ -1.14
HPS4-206ENST00000439453 PPP2R1BP30154 601 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 CXCL12P48061 93 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 CTSCP53634 463 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 TAS2R41P59536 307 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 SNRPD1P62314 119 aaKnown RBP7.94□□□□□ -1.14
HPS4-206ENST00000439453 DYRK1AQ13627 763 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 SFRP5Q5T4F7 317 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 NXPE4Q6UWF7 544 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 SZRD1Q7Z422 152 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 ABCA7Q8IZY2 2146 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 ACBD7Q8N6N7 88 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 BVESQ8NE79 360 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 OR5W2Q8NH69 310 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 WFIKKN2Q8TEU8 576 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 ST8SIA2Q92186 375 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 OSTF1Q92882 214 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 TBX5Q99593 518 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 GSDMCQ9BYG8 508 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 MTG2Q9H4K7 406 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 NPDC1Q9NQX5 325 aaPredicted RBP7.94□□□□□ -1.14
HPS4-206ENST00000439453 FAM86C1Q9NVL1 165 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 PIPOXQ9P0Z9 390 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 ENTPD4Q9Y227 616 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 RALGAPA1Q6GYQ0 2036 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 SLC5A10A0PJK1 596 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 OR6C65A6NJZ3 312 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 PRAF2O60831 178 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 B3GALNT1O75752 331 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 GABRG2P18507 467 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 NBL1P41271 181 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 WASP42768 502 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 SRSF5Q13243 272 aaKnown RBP7.94□□□□□ -1.14
HPS4-206ENST00000439453 ZNF169Q14929 603 aaPredicted RBP7.94□□□□□ -1.14
HPS4-206ENST00000439453 PGGHGQ32M88 737 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 ALKAL2Q6UX46 152 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 PRSS45Q7RTY3 260 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 WDR5BQ86VZ2 330 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 CPOQ8IVL8 374 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 SLC5A11Q8WWX8 675 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 EXOSC8Q96B26 276 aaKnown RBP7.94□□□□□ -1.14
HPS4-206ENST00000439453 TM4SF18Q96CE8 201 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 AHCYL2Q96HN2 611 aaKnown RBP7.94□□□□□ -1.14
HPS4-206ENST00000439453 LCORQ96JN0 433 aaPredicted RBP7.94□□□□□ -1.14
HPS4-206ENST00000439453 SLC35G5Q96KT7 338 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 ZDHHC6Q9H6R6 413 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 WASH6PQ9NQA3 447 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 HINT3Q9NQE9 182 aaKnown RBP7.94□□□□□ -1.14
HPS4-206ENST00000439453 MED17Q9NVC6 651 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 COPS3Q9UNS2 423 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 MCRIP1C9JLW8 97 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 TEX46H3BTG2 121 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 GSTZ1O43708 216 aaPredicted RBP7.94□□□□□ -1.14
HPS4-206ENST00000439453 NFYAP23511 347 aaPredicted RBP7.94□□□□□ -1.14
HPS4-206ENST00000439453 ATP5A1P25705 553 aaKnown RBP7.94□□□□□ -1.14
HPS4-206ENST00000439453 PBLDP30039 288 aaPredicted RBP7.94□□□□□ -1.14
HPS4-206ENST00000439453 NTSR1P30989 418 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 VIPR1P32241 457 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 OMPP47874 163 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 VEGFCP49767 419 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 PCBP4P57723 403 aaKnown RBP7.94□□□□□ -1.14
HPS4-206ENST00000439453 GRM7Q14831 915 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 ETFDHQ16134 617 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 METTL11BQ5VVY1 283 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 TMEM99Q8N816 258 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 FRMD1Q8N878 549 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 FAM71CQ8NEG0 241 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 OR11G2Q8NGC1 345 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 ABHD4Q8TB40 342 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 PIGXQ8TBF5 258 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 SCARB1Q8WTV0 552 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 CNOT9Q92600 299 aaKnown RBP7.94□□□□□ -1.14
HPS4-206ENST00000439453 PPP1R16AQ96I34 528 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 TIMP4Q99727 224 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 OR10A4Q9H209 315 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 TRIM36Q9NQ86 728 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 MRPL15Q9P015 296 aaKnown RBP7.94□□□□□ -1.14
HPS4-206ENST00000439453 FBXL2Q9UKC9 423 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 PRELID3BQ9Y3B1 194 aa7.94□□□□□ -1.14
HPS4-206ENST00000439453 A0A0B4J203 849 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 FAM183AA6NL82 134 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 AIPO00170 330 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 RTCAO00442 366 aaKnown RBP7.93□□□□□ -1.14
HPS4-206ENST00000439453 LAMTOR5O43504 91 aa7.93□□□□□ -1.14
HPS4-206ENST00000439453 GMDSO60547 372 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms