RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 OR13C2Q8NGS9 318 aa15.16■□□□□ 0.02
CLCNKA-203ENST00000439316 ABHD4Q8TB40 342 aa15.16■□□□□ 0.02
CLCNKA-203ENST00000439316 TM4SF19Q96DZ7 209 aa15.16■□□□□ 0.02
CLCNKA-203ENST00000439316 MRGPRX1Q96LB2 322 aa15.16■□□□□ 0.02
CLCNKA-203ENST00000439316 PGLYRP3Q96LB9 341 aa15.16■□□□□ 0.02
CLCNKA-203ENST00000439316 ABCG5Q9H222 651 aa15.16■□□□□ 0.02
CLCNKA-203ENST00000439316 ADGRL4Q9HBW9 690 aa15.16■□□□□ 0.02
CLCNKA-203ENST00000439316 FGF22Q9HCT0 170 aa15.16■□□□□ 0.02
CLCNKA-203ENST00000439316 SIGLEC7Q9Y286 467 aa15.16■□□□□ 0.02
CLCNKA-203ENST00000439316 NCKAP1Q9Y2A7 1128 aa15.16■□□□□ 0.02
CLCNKA-203ENST00000439316 SCN3AQ9NY46 2000 aa15.16■□□□□ 0.02
CLCNKA-203ENST00000439316 A0A0A6YYJ9 748 aa15.16■□□□□ 0.02
CLCNKA-203ENST00000439316 C7orf66A4D0T2 115 aa15.16■□□□□ 0.02
CLCNKA-203ENST00000439316 P2RX6O15547 441 aa15.16■□□□□ 0.02
CLCNKA-203ENST00000439316 EEF1E1O43324 174 aaKnown RBP15.16■□□□□ 0.02
CLCNKA-203ENST00000439316 STX11O75558 287 aa15.16■□□□□ 0.02
CLCNKA-203ENST00000439316 SBK2P0C263 348 aa15.16■□□□□ 0.02
CLCNKA-203ENST00000439316 SNRPD2P62316 118 aaKnown RBP15.16■□□□□ 0.02
CLCNKA-203ENST00000439316 TFF2Q03403 129 aa15.16■□□□□ 0.02
CLCNKA-203ENST00000439316 SUZ12Q15022 739 aaKnown RBP15.16■□□□□ 0.02
CLCNKA-203ENST00000439316 PYHIN1Q6K0P9 492 aa15.16■□□□□ 0.02
CLCNKA-203ENST00000439316 LYPD8Q6UX82 237 aa15.16■□□□□ 0.02
CLCNKA-203ENST00000439316 CEACAM19Q7Z692 300 aa15.16■□□□□ 0.02
CLCNKA-203ENST00000439316 GHDCQ8N2G8 530 aa15.16■□□□□ 0.02
CLCNKA-203ENST00000439316 C17orf47Q8NEP4 570 aa15.16■□□□□ 0.02
CLCNKA-203ENST00000439316 ZCCHC10Q8TBK6 192 aa15.16■□□□□ 0.02
CLCNKA-203ENST00000439316 TRMT10AQ8TBZ6 339 aaKnown RBP15.16■□□□□ 0.02
CLCNKA-203ENST00000439316 BPIFA2Q96DR5 249 aa15.16■□□□□ 0.02
CLCNKA-203ENST00000439316 C4orf36Q96KX1 117 aa15.16■□□□□ 0.02
CLCNKA-203ENST00000439316 HYLS1Q96M11 299 aa15.16■□□□□ 0.02
CLCNKA-203ENST00000439316 IFT27Q9BW83 186 aa15.16■□□□□ 0.02
CLCNKA-203ENST00000439316 SLC17A9Q9BYT1 436 aa15.16■□□□□ 0.02
CLCNKA-203ENST00000439316 CD93Q9NPY3 652 aa15.16■□□□□ 0.02
CLCNKA-203ENST00000439316 DAPP1Q9UN19 280 aa15.16■□□□□ 0.02
CLCNKA-203ENST00000439316 SLC35A3Q9Y2D2 325 aa15.16■□□□□ 0.02
CLCNKA-203ENST00000439316 HSPB11Q9Y547 144 aa15.16■□□□□ 0.02
CLCNKA-203ENST00000439316 TBC1D3EA0A087X179 549 aa15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 SLC9B1P1A6NJY1 282 aa15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 PEX12O00623 359 aa15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 CHP2O43745 196 aa15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 SOX30O94993 753 aa15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 EML2O95834 649 aa15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 MRPL3P09001 348 aaKnown RBP15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 NOS3P29474 1203 aa15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 RPS7P62081 194 aaKnown RBP15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 SLC3A1Q07837 685 aa15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 DBPQ10586 325 aaPredicted RBP15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 AMZ1Q400G9 498 aa15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 DEFB134Q4QY38 66 aa15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 FBXO42Q6P3S6 717 aa15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 C9orf62Q8N4C0 152 aa15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 DEFB123Q8N688 67 aa15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 DTX3Q8N9I9 347 aa15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 TEX19Q8NA77 164 aa15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 FLVCR1-AS1Q8TAF5 88 aa15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 SCMH1Q96GD3 660 aa15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 MSANTD3Q96H12 275 aa15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 OR2M4Q96R27 311 aa15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 ABHD1Q96SE0 405 aa15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 IRF2BPLQ9H1B7 796 aa15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 DUSP22Q9NRW4 184 aa15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 TMEM74BQ9NUR3 256 aa15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 TBC1D29Q9UFV1 150 aa15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 SCML1Q9UN30 329 aa15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 SLC22A7Q9Y694 548 aa15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 TBC1D3DA0A087WVF3 549 aa15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 TBC1D3IA0A087WXS9 549 aa15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 NPIPA5A0A0B4J1W7 369 aa15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 RIIAD1A6NNX1 92 aa15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 TBC1D3LB9A6J9 549 aa15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 NPIPA7E9PJI5 369 aa15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 B3GALT2O43825 422 aa15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 DNAJB6O75190 326 aa15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 TBC1D3HP0C7X1 549 aa15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 NPIPA8P0DM63 369 aa15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 MAT2AP31153 395 aaKnown RBP15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 TLX1P31314 330 aaPredicted RBP15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 CAPZA2P47755 286 aa15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 PLAURQ03405 335 aa15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 FCN2Q15485 313 aa15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 SLC25A35Q3KQZ1 300 aa15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 BCL2L15Q5TBC7 163 aa15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 DMKNQ6E0U4 476 aaPredicted RBP15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 TBC1D3CQ6IPX1 549 aa15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 KIAA1324Q6UXG2 1013 aaKnown RBP15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 Q6ZS52 159 aa15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 BMP8AQ7Z5Y6 402 aa15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 TBC1D3Q8IZP1 549 aaPredicted RBP15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 SLC2A12Q8TD20 617 aa15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 OR2A5Q96R48 311 aa15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 STACQ99469 402 aa15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 OR51V1Q9H2C8 321 aa15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 ERVMER34-1Q9H9K5 563 aa15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 ADAP2Q9NPF8 381 aa15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 FBXO34Q9NWN3 711 aa15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 HAO2Q9NYQ3 351 aa15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 MMP17Q9ULZ9 603 aa15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 MED31Q9Y3C7 131 aa15.15■□□□□ 0.02
CLCNKA-203ENST00000439316 A0A087WV62 115 aa15.14■□□□□ 0.01
CLCNKA-203ENST00000439316 TCRBV21S2A2A0A5A6 115 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms