RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 GPR31O00270 319 aa12.41□□□□□ -0.42
ACTN1-204ENST00000438964 KPNA3O00505 521 aaPredicted RBP12.41□□□□□ -0.42
ACTN1-204ENST00000438964 NDUFA2O43678 99 aa12.41□□□□□ -0.42
ACTN1-204ENST00000438964 SAGP10523 405 aaPredicted RBP12.41□□□□□ -0.42
ACTN1-204ENST00000438964 LIPCP11150 499 aa12.41□□□□□ -0.42
ACTN1-204ENST00000438964 MAKP20794 623 aa12.41□□□□□ -0.42
ACTN1-204ENST00000438964 HOXD10P28358 340 aa12.41□□□□□ -0.42
ACTN1-204ENST00000438964 MMP15P51511 669 aa12.41□□□□□ -0.42
ACTN1-204ENST00000438964 PDX1P52945 283 aa12.41□□□□□ -0.42
ACTN1-204ENST00000438964 FXYD6P3P58550 94 aa12.41□□□□□ -0.42
ACTN1-204ENST00000438964 SORDQ00796 357 aa12.41□□□□□ -0.42
ACTN1-204ENST00000438964 SERTAD2Q14140 314 aa12.41□□□□□ -0.42
ACTN1-204ENST00000438964 GPNMBQ14956 572 aa12.41□□□□□ -0.42
ACTN1-204ENST00000438964 WDR88Q6ZMY6 472 aa12.41□□□□□ -0.42
ACTN1-204ENST00000438964 NDUFAF7Q7L592 441 aa12.41□□□□□ -0.42
ACTN1-204ENST00000438964 SLITRK4Q8IW52 837 aa12.41□□□□□ -0.42
ACTN1-204ENST00000438964 OR4D10Q8NGI6 311 aa12.41□□□□□ -0.42
ACTN1-204ENST00000438964 OR9A2Q8NGT5 310 aa12.41□□□□□ -0.42
ACTN1-204ENST00000438964 HERVK_113Q902F9 699 aa12.41□□□□□ -0.42
ACTN1-204ENST00000438964 OSTF1Q92882 214 aa12.41□□□□□ -0.42
ACTN1-204ENST00000438964 MARK1Q9P0L2 795 aa12.41□□□□□ -0.42
ACTN1-204ENST00000438964 ANAPC1Q9H1A4 1944 aa12.41□□□□□ -0.42
ACTN1-204ENST00000438964 A0A1W2PRU2 124 aa12.41□□□□□ -0.42
ACTN1-204ENST00000438964 POP4O95707 220 aaKnown RBP12.41□□□□□ -0.42
ACTN1-204ENST00000438964 FGBP02675 491 aa12.41□□□□□ -0.42
ACTN1-204ENST00000438964 CTSLP07711 333 aa12.41□□□□□ -0.42
ACTN1-204ENST00000438964 MAPK8P45983 427 aa12.41□□□□□ -0.42
ACTN1-204ENST00000438964 RECQLP46063 649 aaPredicted RBP12.41□□□□□ -0.42
ACTN1-204ENST00000438964 HENMT1Q5T8I9 393 aaKnown RBP12.41□□□□□ -0.42
ACTN1-204ENST00000438964 ZNF793Q6ZN11 406 aa12.41□□□□□ -0.42
ACTN1-204ENST00000438964 UBE2Q1Q7Z7E8 422 aa12.41□□□□□ -0.42
ACTN1-204ENST00000438964 CBLN2Q8IUK8 224 aa12.41□□□□□ -0.42
ACTN1-204ENST00000438964 OR4N5Q8IXE1 308 aa12.41□□□□□ -0.42
ACTN1-204ENST00000438964 VN1R2Q8NFZ6 395 aa12.41□□□□□ -0.42
ACTN1-204ENST00000438964 OR8S1Q8NH09 359 aa12.41□□□□□ -0.42
ACTN1-204ENST00000438964 SLC41A3Q96GZ6 507 aa12.41□□□□□ -0.42
ACTN1-204ENST00000438964 PGLYRP3Q96LB9 341 aa12.41□□□□□ -0.42
ACTN1-204ENST00000438964 ZNF230Q9UIE0 474 aaPredicted RBP12.41□□□□□ -0.42
ACTN1-204ENST00000438964 ATPIF1Q9UII2 106 aa12.41□□□□□ -0.42
ACTN1-204ENST00000438964 ING1Q9UK53 422 aaPredicted RBP12.41□□□□□ -0.42
ACTN1-204ENST00000438964 ICKQ9UPZ9 632 aa12.41□□□□□ -0.42
ACTN1-204ENST00000438964 EXOGQ9Y2C4 368 aaKnown RBP12.41□□□□□ -0.42
ACTN1-204ENST00000438964 C4orf51C9J302 202 aa12.4□□□□□ -0.42
ACTN1-204ENST00000438964 FLRT2O43155 660 aa12.4□□□□□ -0.42
ACTN1-204ENST00000438964 MT-ND5P03915 603 aa12.4□□□□□ -0.42
ACTN1-204ENST00000438964 MPIP34949 423 aa12.4□□□□□ -0.42
ACTN1-204ENST00000438964 SEC61A1P61619 476 aaKnown RBP12.4□□□□□ -0.42
ACTN1-204ENST00000438964 ST3GAL3Q11203 375 aa12.4□□□□□ -0.42
ACTN1-204ENST00000438964 CRMP1Q14194 572 aa12.4□□□□□ -0.42
ACTN1-204ENST00000438964 KIAA1211LQ6NV74 962 aa12.4□□□□□ -0.42
ACTN1-204ENST00000438964 LRRN1Q6UXK5 716 aa12.4□□□□□ -0.42
ACTN1-204ENST00000438964 ZNF783Q6ZMS7 281 aa12.4□□□□□ -0.42
ACTN1-204ENST00000438964 FANK1Q8TC84 345 aa12.4□□□□□ -0.42
ACTN1-204ENST00000438964 GRHL3Q8TE85 626 aa12.4□□□□□ -0.42
ACTN1-204ENST00000438964 SMPDL3BQ92485 455 aa12.4□□□□□ -0.42
ACTN1-204ENST00000438964 DVL3Q92997 716 aaPredicted RBP12.4□□□□□ -0.42
ACTN1-204ENST00000438964 SCLYQ96I15 445 aa12.4□□□□□ -0.42
ACTN1-204ENST00000438964 KCNK15Q9H427 330 aa12.4□□□□□ -0.42
ACTN1-204ENST00000438964 EXOSC3Q9NQT5 275 aaKnown RBP12.4□□□□□ -0.42
ACTN1-204ENST00000438964 CA5BQ9Y2D0 317 aa12.4□□□□□ -0.42
ACTN1-204ENST00000438964 ZNF175Q9Y473 711 aa12.4□□□□□ -0.42
ACTN1-204ENST00000438964 ABHD14A-ACY1A0A1B0GW23 586 aa12.4□□□□□ -0.42
ACTN1-204ENST00000438964 H7C4K7 107 aa12.4□□□□□ -0.42
ACTN1-204ENST00000438964 POP7O75817 140 aaKnown RBP12.4□□□□□ -0.42
ACTN1-204ENST00000438964 PRLHRP49683 370 aa12.4□□□□□ -0.42
ACTN1-204ENST00000438964 PRR5P85299 388 aa12.4□□□□□ -0.42
ACTN1-204ENST00000438964 MC2RQ01718 297 aa12.4□□□□□ -0.42
ACTN1-204ENST00000438964 ZNF85Q03923 595 aa12.4□□□□□ -0.42
ACTN1-204ENST00000438964 TGM3Q08188 693 aa12.4□□□□□ -0.42
ACTN1-204ENST00000438964 GSG1LQ6UXU4 331 aa12.4□□□□□ -0.42
ACTN1-204ENST00000438964 MEPCEQ7L2J0 689 aaKnown RBP12.4□□□□□ -0.42
ACTN1-204ENST00000438964 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.4□□□□□ -0.42
ACTN1-204ENST00000438964 RELTQ969Z4 430 aa12.4□□□□□ -0.42
ACTN1-204ENST00000438964 CNRIP1Q96F85 164 aaPredicted RBP12.4□□□□□ -0.42
ACTN1-204ENST00000438964 TEAD3Q99594 435 aa12.4□□□□□ -0.42
ACTN1-204ENST00000438964 SGPP1Q9BX95 441 aa12.4□□□□□ -0.42
ACTN1-204ENST00000438964 SLC38A1Q9H2H9 487 aa12.4□□□□□ -0.42
ACTN1-204ENST00000438964 SCPEP1Q9HB40 452 aa12.4□□□□□ -0.42
ACTN1-204ENST00000438964 TAS2R3Q9NYW6 316 aa12.4□□□□□ -0.42
ACTN1-204ENST00000438964 IL20Q9NYY1 176 aa12.4□□□□□ -0.42
ACTN1-204ENST00000438964 GNG8Q9UK08 70 aa12.4□□□□□ -0.42
ACTN1-204ENST00000438964 KRBOX1C9JBD0 128 aa12.4□□□□□ -0.43
ACTN1-204ENST00000438964 PRICKLE3O43900 615 aaPredicted RBP12.4□□□□□ -0.43
ACTN1-204ENST00000438964 NFATC1O95644 943 aa12.4□□□□□ -0.43
ACTN1-204ENST00000438964 VSIG10L2P0DP72 767 aa12.4□□□□□ -0.43
ACTN1-204ENST00000438964 SOX2P48431 317 aa12.4□□□□□ -0.43
ACTN1-204ENST00000438964 ANXA11P50995 505 aaKnown RBP12.4□□□□□ -0.43
ACTN1-204ENST00000438964 ID2Q02363 134 aa12.4□□□□□ -0.43
ACTN1-204ENST00000438964 UBE3DQ7Z6J8 389 aa12.4□□□□□ -0.43
ACTN1-204ENST00000438964 C17orf64Q86WR6 236 aa12.4□□□□□ -0.43
ACTN1-204ENST00000438964 PDZD9Q8IXQ8 264 aa12.4□□□□□ -0.43
ACTN1-204ENST00000438964 SLC44A3Q8N4M1 653 aa12.4□□□□□ -0.43
ACTN1-204ENST00000438964 ZNF614Q8N883 585 aa12.4□□□□□ -0.43
ACTN1-204ENST00000438964 CLRN3Q8NCR9 226 aa12.4□□□□□ -0.43
ACTN1-204ENST00000438964 C1orf216Q8TAB5 229 aa12.4□□□□□ -0.43
ACTN1-204ENST00000438964 SMIM4Q8WVI0 70 aa12.4□□□□□ -0.43
ACTN1-204ENST00000438964 KISS1RQ969F8 398 aaPredicted RBP12.4□□□□□ -0.43
ACTN1-204ENST00000438964 ATG4BQ9Y4P1 393 aa12.4□□□□□ -0.43
ACTN1-204ENST00000438964 NARSO43776 548 aaKnown RBP12.39□□□□□ -0.43
ACTN1-204ENST00000438964 PPP1R3DO95685 299 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms