RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 OR51A7Q8NH64 312 aa17.14■□□□□ 0.34
CLK1-205ENST00000434813 OR4C6Q8NH72 309 aa17.14■□□□□ 0.34
CLK1-205ENST00000434813 ACOT12Q8WYK0 555 aa17.14■□□□□ 0.34
CLK1-205ENST00000434813 AHCYL2Q96HN2 611 aaKnown RBP17.14■□□□□ 0.34
CLK1-205ENST00000434813 VSTM2LQ96N03 204 aa17.14■□□□□ 0.34
CLK1-205ENST00000434813 PHOX2BQ99453 314 aa17.14■□□□□ 0.34
CLK1-205ENST00000434813 TBX5Q99593 518 aa17.14■□□□□ 0.34
CLK1-205ENST00000434813 NDC1Q9BTX1 674 aa17.14■□□□□ 0.34
CLK1-205ENST00000434813 RBCK1Q9BYM8 510 aa17.14■□□□□ 0.34
CLK1-205ENST00000434813 CAPN10Q9HC96 672 aa17.14■□□□□ 0.34
CLK1-205ENST00000434813 NEK6Q9HC98 313 aa17.14■□□□□ 0.34
CLK1-205ENST00000434813 ADAM30Q9UKF2 790 aa17.14■□□□□ 0.34
CLK1-205ENST00000434813 A8MU76 341 aa17.14■□□□□ 0.33
CLK1-205ENST00000434813 DVL2O14641 736 aa17.14■□□□□ 0.33
CLK1-205ENST00000434813 SLC19A2O60779 497 aa17.14■□□□□ 0.33
CLK1-205ENST00000434813 ADAM11O75078 769 aa17.14■□□□□ 0.33
CLK1-205ENST00000434813 PPP1R3DO95685 299 aa17.14■□□□□ 0.33
CLK1-205ENST00000434813 SBK2P0C263 348 aa17.14■□□□□ 0.33
CLK1-205ENST00000434813 CTSEP14091 401 aa17.14■□□□□ 0.33
CLK1-205ENST00000434813 NOS3P29474 1203 aa17.14■□□□□ 0.33
CLK1-205ENST00000434813 SLC6A6P31641 620 aa17.14■□□□□ 0.33
CLK1-205ENST00000434813 DDOSTP39656 456 aa17.14■□□□□ 0.33
CLK1-205ENST00000434813 NR4A2P43354 598 aa17.14■□□□□ 0.33
CLK1-205ENST00000434813 CRMP1Q14194 572 aa17.14■□□□□ 0.33
CLK1-205ENST00000434813 BCL2A1Q16548 175 aa17.14■□□□□ 0.33
CLK1-205ENST00000434813 ZSWIM7Q19AV6 140 aa17.14■□□□□ 0.33
CLK1-205ENST00000434813 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.14■□□□□ 0.331e-6■■□□□ 12.3
CLK1-205ENST00000434813 ALG10BQ5I7T1 473 aa17.14■□□□□ 0.33
CLK1-205ENST00000434813 ATAD3CQ5T2N8 411 aa17.14■□□□□ 0.33
CLK1-205ENST00000434813 TRIQKQ629K1 86 aa17.14■□□□□ 0.33
CLK1-205ENST00000434813 ARHGAP11AQ6P4F7 1023 aa17.14■□□□□ 0.33
CLK1-205ENST00000434813 ZC3H14Q6PJT7 736 aaKnown RBP17.14■□□□□ 0.33
CLK1-205ENST00000434813 FRMD1Q8N878 549 aa17.14■□□□□ 0.33
CLK1-205ENST00000434813 OR5W2Q8NH69 310 aa17.14■□□□□ 0.33
CLK1-205ENST00000434813 SLC2A12Q8TD20 617 aa17.14■□□□□ 0.33
CLK1-205ENST00000434813 ZNF486Q96H40 463 aaPredicted RBP17.14■□□□□ 0.33
CLK1-205ENST00000434813 PTCHD1Q96NR3 888 aa17.14■□□□□ 0.33
CLK1-205ENST00000434813 MMP28Q9H239 520 aa17.14■□□□□ 0.33
CLK1-205ENST00000434813 ADGRL4Q9HBW9 690 aa17.14■□□□□ 0.33
CLK1-205ENST00000434813 MCCC2Q9HCC0 563 aa17.14■□□□□ 0.33
CLK1-205ENST00000434813 HAO2Q9NYQ3 351 aa17.14■□□□□ 0.33
CLK1-205ENST00000434813 TGFBR3LH3BV60 316 aa17.13■□□□□ 0.33
CLK1-205ENST00000434813 REM1O75628 298 aa17.13■□□□□ 0.33
CLK1-205ENST00000434813 NGFRP08138 427 aa17.13■□□□□ 0.33
CLK1-205ENST00000434813 SLC2A2P11168 524 aaPredicted RBP17.13■□□□□ 0.33
CLK1-205ENST00000434813 PEPDP12955 493 aa17.13■□□□□ 0.33
CLK1-205ENST00000434813 RNH1P13489 461 aaKnown RBP17.13■□□□□ 0.33
CLK1-205ENST00000434813 F8A1P23610 371 aa17.13■□□□□ 0.33
CLK1-205ENST00000434813 CAPZA2P47755 286 aa17.13■□□□□ 0.33
CLK1-205ENST00000434813 TAS2R43P59537 309 aa17.13■□□□□ 0.33
CLK1-205ENST00000434813 IGLV3-21P80748 117 aaPredicted RBP17.13■□□□□ 0.33
CLK1-205ENST00000434813 TRAM1Q15629 374 aa17.13■□□□□ 0.33
CLK1-205ENST00000434813 ZNF141Q15928 474 aa17.13■□□□□ 0.33
CLK1-205ENST00000434813 RTL4Q6ZR62 310 aa17.13■□□□□ 0.33
CLK1-205ENST00000434813 PRR23CQ6ZRP0 262 aa17.13■□□□□ 0.33
CLK1-205ENST00000434813 OAFQ86UD1 273 aa17.13■□□□□ 0.33
CLK1-205ENST00000434813 GATAD2AQ86YP4 633 aa17.13■□□□□ 0.33
CLK1-205ENST00000434813 Q8N402 240 aa17.13■□□□□ 0.33
CLK1-205ENST00000434813 AVL9Q8NBF6 648 aa17.13■□□□□ 0.33
CLK1-205ENST00000434813 ZDHHC1Q8WTX9 485 aa17.13■□□□□ 0.33
CLK1-205ENST00000434813 RIT1Q92963 219 aa17.13■□□□□ 0.33
CLK1-205ENST00000434813 SENP5Q96HI0 755 aaPredicted RBP17.13■□□□□ 0.33
CLK1-205ENST00000434813 ART5Q96L15 291 aa17.13■□□□□ 0.33
CLK1-205ENST00000434813 OR51V1Q9H2C8 321 aa17.13■□□□□ 0.33
CLK1-205ENST00000434813 CA14Q9ULX7 337 aa17.13■□□□□ 0.33
CLK1-205ENST00000434813 BLACEA4D250 179 aa17.13■□□□□ 0.33
CLK1-205ENST00000434813 B4DXG7 233 aa17.13■□□□□ 0.33
CLK1-205ENST00000434813 TFECO14948 347 aaPredicted RBP17.13■□□□□ 0.33
CLK1-205ENST00000434813 HK1P19367 917 aa17.13■□□□□ 0.33
CLK1-205ENST00000434813 ACTC1P68032 377 aa17.13■□□□□ 0.33
CLK1-205ENST00000434813 ACTA1P68133 377 aa17.13■□□□□ 0.33
CLK1-205ENST00000434813 FHL1Q13642 323 aa17.13■□□□□ 0.33
CLK1-205ENST00000434813 FGFBP1Q14512 234 aa17.13■□□□□ 0.33
CLK1-205ENST00000434813 FCRLBQ6BAA4 426 aa17.13■□□□□ 0.33
CLK1-205ENST00000434813 MCATQ8IVS2 390 aaKnown RBP17.13■□□□□ 0.33
CLK1-205ENST00000434813 OR4N2Q8NGD1 307 aa17.13■□□□□ 0.33
CLK1-205ENST00000434813 TOE1Q96GM8 510 aaKnown RBP17.13■□□□□ 0.33
CLK1-205ENST00000434813 ZC3HAV1LQ96H79 300 aaKnown RBP17.13■□□□□ 0.33
CLK1-205ENST00000434813 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.13■□□□□ 0.33
CLK1-205ENST00000434813 HCN3Q9P1Z3 774 aa17.13■□□□□ 0.33
CLK1-205ENST00000434813 ZMIZ1Q9ULJ6 1067 aa17.13■□□□□ 0.33
CLK1-205ENST00000434813 CYP8B1Q9UNU6 501 aa17.13■□□□□ 0.33
CLK1-205ENST00000434813 PCDHGB7Q9Y5F8 929 aa17.13■□□□□ 0.33
CLK1-205ENST00000434813 A0A0A6YYC8 382 aaPredicted RBP17.12■□□□□ 0.33
CLK1-205ENST00000434813 NPIPB9F8W1W9 429 aa17.12■□□□□ 0.33
CLK1-205ENST00000434813 I3L1I5 382 aaPredicted RBP17.12■□□□□ 0.33
CLK1-205ENST00000434813 PLPP2O43688 288 aa17.12■□□□□ 0.33
CLK1-205ENST00000434813 IFNGP01579 166 aa17.12■□□□□ 0.33
CLK1-205ENST00000434813 MRPL3P09001 348 aaKnown RBP17.12■□□□□ 0.33
CLK1-205ENST00000434813 CHRNB1P11230 501 aa17.12■□□□□ 0.33
CLK1-205ENST00000434813 SLC16A1P53985 500 aa17.12■□□□□ 0.33
CLK1-205ENST00000434813 SKP1P63208 163 aa17.12■□□□□ 0.33
CLK1-205ENST00000434813 POU4F2Q12837 409 aa17.12■□□□□ 0.33
CLK1-205ENST00000434813 C1orf61Q13536 156 aa17.12■□□□□ 0.33
CLK1-205ENST00000434813 IL18Q14116 193 aa17.12■□□□□ 0.33
CLK1-205ENST00000434813 P2RY14Q15391 338 aa17.12■□□□□ 0.33
CLK1-205ENST00000434813 HBMQ6B0K9 141 aa17.12■□□□□ 0.33
CLK1-205ENST00000434813 PTCRAQ6ISU1 281 aaPredicted RBP17.12■□□□□ 0.33
CLK1-205ENST00000434813 LINC00114Q6XXX2 140 aa17.12■□□□□ 0.33
CLK1-205ENST00000434813 SYT13Q7L8C5 426 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms