RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 LHX8Q68G74 356 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 FDX2Q6P4F2 183 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 XKR5Q6UX68 686 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 PARS2Q7L3T8 475 aaKnown RBP3.51□□□□□ -1.85
SHPRH-205ENST00000433355 NUFIP2Q7Z417 695 aaKnown RBP3.51□□□□□ -1.85
SHPRH-205ENST00000433355 LINC00596Q86U02 117 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 ZNF619Q8N2I2 560 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 RNF128Q8TEB7 428 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 CDS1Q92903 461 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 EXOSC8Q96B26 276 aaKnown RBP3.51□□□□□ -1.85
SHPRH-205ENST00000433355 TCF7L1Q9HCS4 588 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 OBP2BQ9NPH6 170 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 CTPS2Q9NRF8 586 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 CMAHPQ9Y471 501 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 LRIT2A6NDA9 550 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 KLKB1P03952 638 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 MELTFP08582 738 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 IRF1P10914 325 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 TNNI3P19429 210 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 CD70P32970 193 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 MC3RP41968 323 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 LBX1P52954 281 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 LCN6P62502 163 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 EMX1Q04741 257 aaPredicted RBP3.51□□□□□ -1.85
SHPRH-205ENST00000433355 FAM129CQ86XR2 697 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 ANKRD53Q8N9V6 530 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 C1GALT1C1Q96EU7 318 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 FBXL20Q96IG2 436 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 QPCTLQ9NXS2 382 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 GRHPRQ9UBQ7 328 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 POMT2Q9UKY4 750 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 LRRK1Q38SD2 2015 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 DUXBA0A1W2PPF3 345 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 VSTM5A8MXK1 200 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 GTPBP1O00178 669 aaKnown RBP3.51□□□□□ -1.85
SHPRH-205ENST00000433355 AQP9O43315 295 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 LYRM1O43325 122 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 TFPTP0C1Z6 253 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 CHMP24386 653 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 GTF3C1Q12789 2109 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 CCL14Q16627 93 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 PGBD2Q6P3X8 592 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 DEFB128Q7Z7B8 93 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 ADGRE4PQ86SQ3 457 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 FAM98AQ8NCA5 519 aaKnown RBP3.51□□□□□ -1.85
SHPRH-205ENST00000433355 GTF3AQ92664 365 aaKnown RBP3.51□□□□□ -1.85
SHPRH-205ENST00000433355 NUDT9Q9BW91 350 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 ABCG8Q9H221 673 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 RRAGCQ9HB90 399 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 MMP17Q9ULZ9 603 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 SERPINE3A8MV23 424 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 LOC730098B7Z3J9 87 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 GJA1P17302 382 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 BSGP35613 385 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 HBA1P69905 142 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 CBFBQ13951 182 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 NSUN5P2Q63ZY6 315 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 OR4F3Q6IEY1 312 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 TCEAL6Q6IPX3 200 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 ARMCX6Q7L4S7 300 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 OR8H2Q8N162 312 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 BAHD1Q8TBE0 780 aaPredicted RBP3.51□□□□□ -1.85
SHPRH-205ENST00000433355 DACT3Q96B18 629 aaPredicted RBP3.51□□□□□ -1.85
SHPRH-205ENST00000433355 GPATCH2Q9NW75 528 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 TAS2R10Q9NYW0 307 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 ZGRF1Q86YA3 2104 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 GABARAPH6UMI1 98 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 AKR7A2O43488 359 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 GIPP09681 153 aaPredicted RBP3.51□□□□□ -1.85
SHPRH-205ENST00000433355 UCHL1P09936 223 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 ACHEP22303 614 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 IRF3Q14653 427 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 ZNF141Q15928 474 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 VWA2Q5GFL6 755 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 ALG10BQ5I7T1 473 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 PODNL1Q6PEZ8 512 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 CD200R1LQ6Q8B3 271 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 RNF148Q8N7C7 305 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 FRS2Q8WU20 508 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 LOXL4Q96JB6 756 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 CHRDQ9H2X0 955 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 RNF121Q9H920 327 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 D6RAR5 112 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 H7BY64 318 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 NPR2P20594 1047 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 OR2B6P58173 313 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 CD81P60033 236 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 CCDC116Q8IYX3 515 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 LILRA2Q8N149 483 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 LSM14AQ8ND56 463 aaKnown RBP3.51□□□□□ -1.85
SHPRH-205ENST00000433355 ELMOD3Q96FG2 381 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 ASB16Q96NS5 453 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 PKP4Q99569 1192 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 ZNF426Q9BUY5 554 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 SRA1Q9HD15 236 aaKnown RBP3.51□□□□□ -1.85
SHPRH-205ENST00000433355 DAPP1Q9UN19 280 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 ZNF281Q9Y2X9 895 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 CCL27Q9Y4X3 112 aa3.51□□□□□ -1.85
SHPRH-205ENST00000433355 NPIPA5E9PKD4 350 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 GSTZ1O43708 216 aaPredicted RBP3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms