RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 CDK4P11802 303 aa15.29■□□□□ 0.04
USHBP1-203ENST00000431146 GADD45AP24522 165 aa15.29■□□□□ 0.04
USHBP1-203ENST00000431146 GRK5P34947 590 aa15.29■□□□□ 0.04
USHBP1-203ENST00000431146 DCDP81605 110 aaKnown RBP15.29■□□□□ 0.04
USHBP1-203ENST00000431146 SLC25A30Q5SVS4 291 aa15.29■□□□□ 0.04
USHBP1-203ENST00000431146 FNDC7Q5VTL7 733 aa15.29■□□□□ 0.04
USHBP1-203ENST00000431146 MEDAGQ5VYS4 303 aa15.29■□□□□ 0.04
USHBP1-203ENST00000431146 ULK3Q6PHR2 472 aa15.29■□□□□ 0.04
USHBP1-203ENST00000431146 TMPRSS11FQ6ZWK6 438 aa15.29■□□□□ 0.04
USHBP1-203ENST00000431146 SLC29A4Q7RTT9 530 aa15.29■□□□□ 0.04
USHBP1-203ENST00000431146 ZNF527Q8NB42 609 aa15.29■□□□□ 0.04
USHBP1-203ENST00000431146 OR52I1Q8NGK6 324 aa15.29■□□□□ 0.04
USHBP1-203ENST00000431146 THAP3Q8WTV1 239 aaPredicted RBP15.29■□□□□ 0.04
USHBP1-203ENST00000431146 ZNF524Q96C55 264 aa15.29■□□□□ 0.04
USHBP1-203ENST00000431146 SH3YL1Q96HL8 342 aaPredicted RBP15.29■□□□□ 0.04
USHBP1-203ENST00000431146 ART5Q96L15 291 aa15.29■□□□□ 0.04
USHBP1-203ENST00000431146 ZNF426Q9BUY5 554 aa15.29■□□□□ 0.04
USHBP1-203ENST00000431146 IGLV3-12A0A075B6K2 115 aa15.29■□□□□ 0.04
USHBP1-203ENST00000431146 EFCAB9A8MZ26 197 aa15.29■□□□□ 0.04
USHBP1-203ENST00000431146 UBL4AP11441 157 aa15.29■□□□□ 0.04
USHBP1-203ENST00000431146 IL12BP29460 328 aa15.29■□□□□ 0.04
USHBP1-203ENST00000431146 FCRLBQ6BAA4 426 aa15.29■□□□□ 0.04
USHBP1-203ENST00000431146 ANKRD37Q7Z713 158 aa15.29■□□□□ 0.04
USHBP1-203ENST00000431146 BRIX1Q8TDN6 353 aaKnown RBP15.29■□□□□ 0.04
USHBP1-203ENST00000431146 LGALS12Q96DT0 336 aa15.29■□□□□ 0.04
USHBP1-203ENST00000431146 RNFT2Q96EX2 444 aa15.29■□□□□ 0.04
USHBP1-203ENST00000431146 CRELD1Q96HD1 420 aa15.29■□□□□ 0.04
USHBP1-203ENST00000431146 EVA1AQ9H8M9 152 aa15.29■□□□□ 0.04
USHBP1-203ENST00000431146 SIGLEC7Q9Y286 467 aa15.29■□□□□ 0.04
USHBP1-203ENST00000431146 SLC35A3Q9Y2D2 325 aa15.29■□□□□ 0.04
USHBP1-203ENST00000431146 GTPBP1O00178 669 aaKnown RBP15.28■□□□□ 0.04
USHBP1-203ENST00000431146 PRODHO43272 600 aa15.28■□□□□ 0.04
USHBP1-203ENST00000431146 CSTF2P33240 577 aaKnown RBP eCLIP15.28■□□□□ 0.04
USHBP1-203ENST00000431146 MPLP40238 635 aa15.28■□□□□ 0.04
USHBP1-203ENST00000431146 CTBP2P56545 445 aa15.28■□□□□ 0.04
USHBP1-203ENST00000431146 COPZ1P61923 177 aa15.28■□□□□ 0.04
USHBP1-203ENST00000431146 PLCXD2Q0VAA5 305 aa15.28■□□□□ 0.04
USHBP1-203ENST00000431146 SKP2Q13309 424 aa15.28■□□□□ 0.04
USHBP1-203ENST00000431146 NCF4Q15080 339 aa15.28■□□□□ 0.04
USHBP1-203ENST00000431146 SOWAHCQ53LP3 525 aaPredicted RBP15.28■□□□□ 0.04
USHBP1-203ENST00000431146 ZNF385CQ66K41 422 aaPredicted RBP15.28■□□□□ 0.04
USHBP1-203ENST00000431146 LINC00114Q6XXX2 140 aa15.28■□□□□ 0.04
USHBP1-203ENST00000431146 CLDN22Q8N7P3 220 aa15.28■□□□□ 0.04
USHBP1-203ENST00000431146 ZBTB44Q8NCP5 570 aa15.28■□□□□ 0.04
USHBP1-203ENST00000431146 OR52L1Q8NGH7 329 aa15.28■□□□□ 0.04
USHBP1-203ENST00000431146 C9orf43Q8TAL5 461 aaPredicted RBP15.28■□□□□ 0.04
USHBP1-203ENST00000431146 MGLLQ99685 303 aa15.28■□□□□ 0.04
USHBP1-203ENST00000431146 PRRG3Q9BZD7 231 aa15.28■□□□□ 0.04
USHBP1-203ENST00000431146 MED20Q9H944 212 aa15.28■□□□□ 0.04
USHBP1-203ENST00000431146 BHLHE40O14503 412 aa15.28■□□□□ 0.04
USHBP1-203ENST00000431146 CSO75390 466 aaKnown RBP15.28■□□□□ 0.04
USHBP1-203ENST00000431146 ZNF28P17035 718 aa15.28■□□□□ 0.04
USHBP1-203ENST00000431146 BMP7P18075 431 aa15.28■□□□□ 0.04
USHBP1-203ENST00000431146 ABCD3P28288 659 aa15.28■□□□□ 0.04
USHBP1-203ENST00000431146 GPR143P51810 404 aa15.28■□□□□ 0.04
USHBP1-203ENST00000431146 TSTQ16762 297 aaKnown RBP15.28■□□□□ 0.04
USHBP1-203ENST00000431146 B3GLCTQ6Y288 498 aa15.28■□□□□ 0.04
USHBP1-203ENST00000431146 ZNF367Q7RTV3 350 aa15.28■□□□□ 0.04
USHBP1-203ENST00000431146 SLC46A3Q7Z3Q1 461 aa15.28■□□□□ 0.04
USHBP1-203ENST00000431146 OAFQ86UD1 273 aa15.28■□□□□ 0.04
USHBP1-203ENST00000431146 MARCH3Q86UD3 253 aa15.28■□□□□ 0.04
USHBP1-203ENST00000431146 CYP4Z2PQ8N1L4 340 aa15.28■□□□□ 0.04
USHBP1-203ENST00000431146 LRRC17Q8N6Y2 441 aa15.28■□□□□ 0.04
USHBP1-203ENST00000431146 FAM71CQ8NEG0 241 aa15.28■□□□□ 0.04
USHBP1-203ENST00000431146 PMEPA1Q969W9 287 aa15.28■□□□□ 0.04
USHBP1-203ENST00000431146 C3orf49Q96BT1 292 aa15.28■□□□□ 0.04
USHBP1-203ENST00000431146 OMA1Q96E52 524 aa15.28■□□□□ 0.04
USHBP1-203ENST00000431146 TNFRSF13CQ96RJ3 184 aa15.28■□□□□ 0.04
USHBP1-203ENST00000431146 IFT27Q9BW83 186 aa15.28■□□□□ 0.04
USHBP1-203ENST00000431146 HOXD1Q9GZZ0 328 aa15.28■□□□□ 0.04
USHBP1-203ENST00000431146 TIMMDC1Q9NPL8 285 aa15.28■□□□□ 0.04
USHBP1-203ENST00000431146 HINT3Q9NQE9 182 aaKnown RBP15.28■□□□□ 0.04
USHBP1-203ENST00000431146 ERGIC3Q9Y282 383 aa15.28■□□□□ 0.04
USHBP1-203ENST00000431146 TMEM5Q9Y2B1 443 aa15.28■□□□□ 0.04
USHBP1-203ENST00000431146 KDM4EB2RXH2 506 aaPredicted RBP15.27■□□□□ 0.04
USHBP1-203ENST00000431146 NTN3O00634 580 aaPredicted RBP15.27■□□□□ 0.04
USHBP1-203ENST00000431146 SOCS6O14544 535 aa15.27■□□□□ 0.04
USHBP1-203ENST00000431146 ALOX12BO75342 701 aa15.27■□□□□ 0.04
USHBP1-203ENST00000431146 CCL4P13236 92 aa15.27■□□□□ 0.04
USHBP1-203ENST00000431146 ETV5P41161 510 aa15.27■□□□□ 0.04
USHBP1-203ENST00000431146 MTNR1AP48039 350 aa15.27■□□□□ 0.04
USHBP1-203ENST00000431146 RGS6P49758 472 aa15.27■□□□□ 0.04
USHBP1-203ENST00000431146 ETV1P50549 477 aa15.27■□□□□ 0.04
USHBP1-203ENST00000431146 GAS1P54826 345 aa15.27■□□□□ 0.04
USHBP1-203ENST00000431146 CDH11P55287 796 aa15.27■□□□□ 0.04
USHBP1-203ENST00000431146 DCAF7P61962 342 aa15.27■□□□□ 0.04
USHBP1-203ENST00000431146 ANGPT1Q15389 498 aa15.27■□□□□ 0.04
USHBP1-203ENST00000431146 ZSWIM7Q19AV6 140 aa15.27■□□□□ 0.04
USHBP1-203ENST00000431146 FAM199XQ6PEV8 388 aaPredicted RBP15.27■□□□□ 0.04
USHBP1-203ENST00000431146 OVCH1Q7RTY7 1134 aa15.27■□□□□ 0.04
USHBP1-203ENST00000431146 CPOQ8IVL8 374 aa15.27■□□□□ 0.04
USHBP1-203ENST00000431146 TBC1D15Q8TC07 691 aa15.27■□□□□ 0.04
USHBP1-203ENST00000431146 NACC2Q96BF6 587 aa15.27■□□□□ 0.04
USHBP1-203ENST00000431146 C8orf44Q96CB5 159 aa15.27■□□□□ 0.04
USHBP1-203ENST00000431146 TEX12Q9BXU0 123 aa15.27■□□□□ 0.04
USHBP1-203ENST00000431146 OR51E2Q9H255 320 aa15.27■□□□□ 0.04
USHBP1-203ENST00000431146 RNF167Q9H6Y7 350 aa15.27■□□□□ 0.04
USHBP1-203ENST00000431146 MRTO4Q9UKD2 239 aaKnown RBP15.27■□□□□ 0.04
USHBP1-203ENST00000431146 LSM2Q9Y333 95 aaKnown RBP15.27■□□□□ 0.04
USHBP1-203ENST00000431146 FREM2Q5SZK8 3169 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms