RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 ZNF775Q96BV0 537 aaPredicted RBP10.46□□□□□ -0.73
HDAC4-202ENST00000430200 PLPPR2Q96GM1 343 aa10.46□□□□□ -0.73
HDAC4-202ENST00000430200 C18orf12Q96KH6 178 aa10.46□□□□□ -0.73
HDAC4-202ENST00000430200 MRGPRX4Q96LA9 322 aa10.46□□□□□ -0.73
HDAC4-202ENST00000430200 THUMPD3Q9BV44 507 aaKnown RBP10.46□□□□□ -0.73
HDAC4-202ENST00000430200 MEAF6Q9HAF1 191 aa10.46□□□□□ -0.73
HDAC4-202ENST00000430200 AIG1Q9NVV5 245 aa10.46□□□□□ -0.73
HDAC4-202ENST00000430200 PAQR5Q9NXK6 330 aaPredicted RBP10.46□□□□□ -0.73
HDAC4-202ENST00000430200 MARCOQ9UEW3 520 aaPredicted RBP10.46□□□□□ -0.73
HDAC4-202ENST00000430200 FBN1P35555 2871 aaKnown RBP10.46□□□□□ -0.74
HDAC4-202ENST00000430200 GOLGA8QA0A0J9YX86 632 aa10.45□□□□□ -0.74
HDAC4-202ENST00000430200 GOLGA8OA6NCC3 632 aa10.45□□□□□ -0.74
HDAC4-202ENST00000430200 E9PBE3 544 aa10.45□□□□□ -0.74
HDAC4-202ENST00000430200 GOLGA8NF8WBI6 632 aa10.45□□□□□ -0.74
HDAC4-202ENST00000430200 GTPBP1O00178 669 aaKnown RBP10.45□□□□□ -0.74
HDAC4-202ENST00000430200 HMGN4O00479 90 aa10.45□□□□□ -0.74
HDAC4-202ENST00000430200 TM9SF1O15321 606 aa10.45□□□□□ -0.74
HDAC4-202ENST00000430200 ZNF500O60304 480 aaPredicted RBP10.45□□□□□ -0.74
HDAC4-202ENST00000430200 CYP7B1O75881 506 aa10.45□□□□□ -0.74
HDAC4-202ENST00000430200 CPSF4O95639 269 aaKnown RBP10.45□□□□□ -0.74
HDAC4-202ENST00000430200 FESP07332 822 aa10.45□□□□□ -0.74
HDAC4-202ENST00000430200 CHRM4P08173 479 aa10.45□□□□□ -0.74
HDAC4-202ENST00000430200 KRT16P08779 473 aa10.45□□□□□ -0.74
HDAC4-202ENST00000430200 INHBBP09529 407 aa10.45□□□□□ -0.74
HDAC4-202ENST00000430200 MYZAPP0CAP1 466 aa10.45□□□□□ -0.74
HDAC4-202ENST00000430200 FOSL1P15407 271 aa10.45□□□□□ -0.74
HDAC4-202ENST00000430200 ADH6P28332 368 aa10.45□□□□□ -0.74
HDAC4-202ENST00000430200 NTF4P34130 210 aa10.45□□□□□ -0.74
HDAC4-202ENST00000430200 PTH2RP49190 550 aa10.45□□□□□ -0.74
HDAC4-202ENST00000430200 RPL14P50914 215 aaKnown RBP10.45□□□□□ -0.74
HDAC4-202ENST00000430200 SESN3P58005 492 aa10.45□□□□□ -0.74
HDAC4-202ENST00000430200 MAD2L1Q13257 205 aaPredicted RBP10.45□□□□□ -0.74
HDAC4-202ENST00000430200 TAB1Q15750 504 aa10.45□□□□□ -0.74
HDAC4-202ENST00000430200 SMU1Q2TAY7 513 aa10.45□□□□□ -0.74
HDAC4-202ENST00000430200 BEX5Q5H9J7 111 aa10.45□□□□□ -0.74
HDAC4-202ENST00000430200 COX20Q5RI15 118 aa10.45□□□□□ -0.74
HDAC4-202ENST00000430200 OGFOD2Q6N063 350 aa10.45□□□□□ -0.74
HDAC4-202ENST00000430200 ALKBH2Q6NS38 261 aa10.45□□□□□ -0.74
HDAC4-202ENST00000430200 C3orf33Q6P1S2 294 aa10.45□□□□□ -0.74
HDAC4-202ENST00000430200 DNAJC14Q6Y2X3 702 aaPredicted RBP10.45□□□□□ -0.74
HDAC4-202ENST00000430200 PLEKHM3Q6ZWE6 761 aa10.45□□□□□ -0.74
HDAC4-202ENST00000430200 ANKFN1Q8N957 763 aa10.45□□□□□ -0.74
HDAC4-202ENST00000430200 ANKRD42Q8N9B4 389 aa10.45□□□□□ -0.74
HDAC4-202ENST00000430200 PNPT1Q8TCS8 783 aaKnown RBP10.45□□□□□ -0.74
HDAC4-202ENST00000430200 ROPN1LQ96C74 230 aa10.45□□□□□ -0.74
HDAC4-202ENST00000430200 NEURL3Q96EH8 262 aa10.45□□□□□ -0.74
HDAC4-202ENST00000430200 ARL5BQ96KC2 179 aa10.45□□□□□ -0.74
HDAC4-202ENST00000430200 OR5B2Q96R09 309 aa10.45□□□□□ -0.74
HDAC4-202ENST00000430200 PIP5K1AQ99755 562 aa10.45□□□□□ -0.74
HDAC4-202ENST00000430200 DPY30Q9C005 99 aa10.45□□□□□ -0.74
HDAC4-202ENST00000430200 OR11A1Q9GZK7 315 aa10.45□□□□□ -0.74
HDAC4-202ENST00000430200 LAT2Q9GZY6 243 aa10.45□□□□□ -0.74
HDAC4-202ENST00000430200 HOXD1Q9GZZ0 328 aa10.45□□□□□ -0.74
HDAC4-202ENST00000430200 SLC38A1Q9H2H9 487 aa10.45□□□□□ -0.74
HDAC4-202ENST00000430200 CENPHQ9H3R5 247 aa10.45□□□□□ -0.74
HDAC4-202ENST00000430200 WDR55Q9H6Y2 383 aaPredicted RBP10.45□□□□□ -0.74
HDAC4-202ENST00000430200 BCO1Q9HAY6 547 aa10.45□□□□□ -0.74
HDAC4-202ENST00000430200 NPAP1Q9NZP6 1156 aa10.45□□□□□ -0.74
HDAC4-202ENST00000430200 CHD3Q12873 2000 aaKnown RBP10.45□□□□□ -0.74
HDAC4-202ENST00000430200 ZNF716A6NP11 495 aa10.44□□□□□ -0.74
HDAC4-202ENST00000430200 EIF4E2O60573 245 aaKnown RBP10.44□□□□□ -0.74
HDAC4-202ENST00000430200 SMPD2O60906 423 aa10.44□□□□□ -0.74
HDAC4-202ENST00000430200 SNNO75324 88 aaPredicted RBP10.44□□□□□ -0.74
HDAC4-202ENST00000430200 STX11O75558 287 aa10.44□□□□□ -0.74
HDAC4-202ENST00000430200 CSTAP01040 98 aa10.44□□□□□ -0.74
HDAC4-202ENST00000430200 GSNP06396 782 aa10.44□□□□□ -0.74
HDAC4-202ENST00000430200 LBPP18428 481 aa10.44□□□□□ -0.74
HDAC4-202ENST00000430200 EPHA3P29320 983 aa10.44□□□□□ -0.74
HDAC4-202ENST00000430200 MVDP53602 400 aa10.44□□□□□ -0.74
HDAC4-202ENST00000430200 FOXG1P55316 489 aaPredicted RBP10.44□□□□□ -0.74
HDAC4-202ENST00000430200 CHRNEQ04844 493 aa10.44□□□□□ -0.74
HDAC4-202ENST00000430200 LTBQ06643 244 aa10.44□□□□□ -0.74
HDAC4-202ENST00000430200 KRTAP1-1Q07627 177 aa10.44□□□□□ -0.74
HDAC4-202ENST00000430200 CBFBQ13951 182 aa10.44□□□□□ -0.74
HDAC4-202ENST00000430200 SYPL1Q16563 259 aa10.44□□□□□ -0.74
HDAC4-202ENST00000430200 GTDC1Q4AE62 458 aa10.44□□□□□ -0.74
HDAC4-202ENST00000430200 C20orf204Q6ZNR8 217 aa10.44□□□□□ -0.74
HDAC4-202ENST00000430200 BEND4Q6ZU67 534 aa10.44□□□□□ -0.74
HDAC4-202ENST00000430200 C16orf62Q7Z3J2 963 aa10.44□□□□□ -0.74
HDAC4-202ENST00000430200 YTHDF3Q7Z739 585 aaKnown RBP10.44□□□□□ -0.74
HDAC4-202ENST00000430200 RNF130Q86XS8 419 aa10.44□□□□□ -0.74
HDAC4-202ENST00000430200 LRRC75A-AS1Q8N1F1 130 aa10.44□□□□□ -0.74
HDAC4-202ENST00000430200 NATD1Q8N6N6 113 aa10.44□□□□□ -0.74
HDAC4-202ENST00000430200 TOR1AIP2Q8NFQ8 470 aa10.44□□□□□ -0.74
HDAC4-202ENST00000430200 KBTBD8Q8NFY9 601 aa10.44□□□□□ -0.74
HDAC4-202ENST00000430200 CNOT9Q92600 299 aaKnown RBP10.44□□□□□ -0.74
HDAC4-202ENST00000430200 CCDC115Q96NT0 180 aa10.44□□□□□ -0.74
HDAC4-202ENST00000430200 PRPF18Q99633 342 aaKnown RBP10.44□□□□□ -0.74
HDAC4-202ENST00000430200 SLC35A5Q9BS91 424 aa10.44□□□□□ -0.74
HDAC4-202ENST00000430200 CCDC106Q9BWC9 280 aa10.44□□□□□ -0.74
HDAC4-202ENST00000430200 SAP130Q9H0E3 1048 aa10.44□□□□□ -0.74
HDAC4-202ENST00000430200 HEATR1Q9H583 2144 aaKnown RBP10.44□□□□□ -0.74
HDAC4-202ENST00000430200 CTPS2Q9NRF8 586 aa10.44□□□□□ -0.74
HDAC4-202ENST00000430200 GLRX2Q9NS18 164 aa10.44□□□□□ -0.74
HDAC4-202ENST00000430200 WDR45Q9Y484 360 aa10.44□□□□□ -0.74
HDAC4-202ENST00000430200 GPR45Q9Y5Y3 372 aa10.44□□□□□ -0.74
HDAC4-202ENST00000430200 MXRA5Q9NR99 2828 aa10.44□□□□□ -0.74
HDAC4-202ENST00000430200 PRSS51A0A1B0GVH4 220 aa10.43□□□□□ -0.74
HDAC4-202ENST00000430200 TMEM120BA0PK00 339 aa10.43□□□□□ -0.74
HDAC4-202ENST00000430200 H3BNH8 94 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms