RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.73□□□□□ -1.17
CD44-208ENST00000428726 ST3GAL3Q11203 375 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 LARS2Q15031 903 aaKnown RBP7.73□□□□□ -1.17
CD44-208ENST00000428726 TRAM2Q15035 370 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 NDUFA9Q16795 377 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 ZFP69Q49AA0 526 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 TMEM201Q5SNT2 666 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 TMEM184AQ6ZMB5 413 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 MARCH9Q86YJ5 346 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 CA13Q8N1Q1 262 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 FAM98AQ8NCA5 519 aaKnown RBP7.73□□□□□ -1.17
CD44-208ENST00000428726 CAMKVQ8NCB2 501 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 PHOSPHO1Q8TCT1 267 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 RASD2Q96D21 266 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 AHCYL2Q96HN2 611 aaKnown RBP7.73□□□□□ -1.17
CD44-208ENST00000428726 TAPBPLQ9BX59 468 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 KCNN2Q9H2S1 579 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 UBQLN3Q9H347 655 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 SRA1Q9HD15 236 aaKnown RBP7.73□□□□□ -1.17
CD44-208ENST00000428726 PTGFRNQ9P2B2 879 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 MYEF2Q9P2K5 600 aaKnown RBP7.73□□□□□ -1.17
CD44-208ENST00000428726 ZNF221Q9UK13 617 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 TBC1D24Q9ULP9 559 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 DOCK7Q96N67 2140 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 DMXL2Q8TDJ6 3036 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 SPTY2D1-AS1A0A0U1RR47 76 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 TVP23AA6NH52 213 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 DYRK3O43781 588 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 CBX7O95931 251 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 HOXC4P09017 264 aaPredicted RBP7.73□□□□□ -1.17
CD44-208ENST00000428726 SOX6P35712 828 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 OMPP47874 163 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 ARL4DP49703 201 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 ZNF136P52737 540 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 SMSP52788 366 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 CTBP2P56545 445 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 ERVK-25P63136 954 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 PSG6Q00889 435 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 PYDC2Q56P42 97 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 IDNKQ5T6J7 187 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 TUBA3EQ6PEY2 450 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 CD300LDQ6UXZ3 194 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 ABHD13Q7L211 337 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 OAFQ86UD1 273 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 SERPINA12Q8IW75 414 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 ZNF511Q8NB15 262 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 BAHD1Q8TBE0 780 aaPredicted RBP7.73□□□□□ -1.17
CD44-208ENST00000428726 FANK1Q8TC84 345 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 ASB12Q8WXK4 309 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 NMNAT3Q96T66 252 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 CTRCQ99895 268 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 SLC30A2Q9BRI3 323 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 PINK1Q9BXM7 581 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 AKIRIN1Q9H9L7 192 aaPredicted RBP7.73□□□□□ -1.17
CD44-208ENST00000428726 TXNL4BQ9NX01 149 aaKnown RBP7.73□□□□□ -1.17
CD44-208ENST00000428726 LYARQ9NX58 379 aaKnown RBP7.73□□□□□ -1.17
CD44-208ENST00000428726 CCDC59Q9P031 241 aaKnown RBP7.73□□□□□ -1.17
CD44-208ENST00000428726 MMP17Q9ULZ9 603 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 RPL36Q9Y3U8 105 aaKnown RBP7.73□□□□□ -1.17
CD44-208ENST00000428726 A6NCN8 305 aa7.72□□□□□ -1.17
CD44-208ENST00000428726 FAM47E-STBD1D6RA91 191 aa7.72□□□□□ -1.17
CD44-208ENST00000428726 CYR61O00622 381 aa7.72□□□□□ -1.17
CD44-208ENST00000428726 SCO2O43819 266 aa7.72□□□□□ -1.17
CD44-208ENST00000428726 GPR75O95800 540 aa7.72□□□□□ -1.17
CD44-208ENST00000428726 LIMS3P0CW19 117 aa7.72□□□□□ -1.17
CD44-208ENST00000428726 LIMS4P0CW20 117 aa7.72□□□□□ -1.17
CD44-208ENST00000428726 HPGDP15428 266 aa7.72□□□□□ -1.17
CD44-208ENST00000428726 BMP7P18075 431 aa7.72□□□□□ -1.17
CD44-208ENST00000428726 AHCYP23526 432 aa7.72□□□□□ -1.17
CD44-208ENST00000428726 SHC1P29353 583 aa7.72□□□□□ -1.17
CD44-208ENST00000428726 CRYBB2P43320 205 aa7.72□□□□□ -1.17
CD44-208ENST00000428726 NCF4Q15080 339 aa7.72□□□□□ -1.17
CD44-208ENST00000428726 TOMM34Q15785 309 aaPredicted RBP7.72□□□□□ -1.17
CD44-208ENST00000428726 ALG10BQ5I7T1 473 aa7.72□□□□□ -1.17
CD44-208ENST00000428726 ZNF517Q6ZMY9 492 aaPredicted RBP7.72□□□□□ -1.17
CD44-208ENST00000428726 C17orf47Q8NEP4 570 aa7.72□□□□□ -1.17
CD44-208ENST00000428726 IL17RDQ8NFM7 739 aa7.72□□□□□ -1.17
CD44-208ENST00000428726 SLC39A7Q92504 469 aa7.72□□□□□ -1.17
CD44-208ENST00000428726 ANKRD9Q96BM1 317 aaPredicted RBP7.72□□□□□ -1.17
CD44-208ENST00000428726 BPIFA2Q96DR5 249 aa7.72□□□□□ -1.17
CD44-208ENST00000428726 MS4A4EQ96PG1 132 aa7.72□□□□□ -1.17
CD44-208ENST00000428726 ERMAPQ96PL5 475 aaPredicted RBP7.72□□□□□ -1.17
CD44-208ENST00000428726 PDCD1LG2Q9BQ51 273 aa7.72□□□□□ -1.17
CD44-208ENST00000428726 ORAI3Q9BRQ5 295 aa7.72□□□□□ -1.17
CD44-208ENST00000428726 TMEM185BQ9H7F4 350 aa7.72□□□□□ -1.17
CD44-208ENST00000428726 SIDT1Q9NXL6 827 aaKnown RBP7.72□□□□□ -1.17
CD44-208ENST00000428726 CALML5Q9NZT1 146 aa7.72□□□□□ -1.17
CD44-208ENST00000428726 SCML1Q9UN30 329 aa7.72□□□□□ -1.17
CD44-208ENST00000428726 SSR3Q9UNL2 185 aa7.72□□□□□ -1.17
CD44-208ENST00000428726 SPENQ96T58 3664 aaKnown RBP7.72□□□□□ -1.17
CD44-208ENST00000428726 ZFHX2Q9C0A1 2572 aaPredicted RBP7.72□□□□□ -1.17
CD44-208ENST00000428726 A0A1B0GWA3 101 aa7.72□□□□□ -1.17
CD44-208ENST00000428726 FAM221BA6H8Z2 402 aa7.72□□□□□ -1.17
CD44-208ENST00000428726 TMEM150CB9EJG8 249 aa7.72□□□□□ -1.17
CD44-208ENST00000428726 AKR7A2O43488 359 aa7.72□□□□□ -1.17
CD44-208ENST00000428726 GALR3O60755 368 aaPredicted RBP7.72□□□□□ -1.17
CD44-208ENST00000428726 STX11O75558 287 aa7.72□□□□□ -1.17
CD44-208ENST00000428726 APEHP13798 732 aaKnown RBP7.72□□□□□ -1.17
CD44-208ENST00000428726 DRD1P21728 446 aa7.72□□□□□ -1.17
CD44-208ENST00000428726 PAICSP22234 425 aaKnown RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms