RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 HOXB9P17482 250 aaPredicted RBP16.37■□□□□ 0.21
SMARCAL1-205ENST00000425815 RPS4Y1P22090 263 aaKnown RBP16.37■□□□□ 0.21
SMARCAL1-205ENST00000425815 UGT2B10P36537 528 aa16.37■□□□□ 0.21
SMARCAL1-205ENST00000425815 PPP2R2AP63151 447 aa16.37■□□□□ 0.21
SMARCAL1-205ENST00000425815 SELENBP1Q13228 472 aa16.37■□□□□ 0.21
SMARCAL1-205ENST00000425815 DNAJC14Q6Y2X3 702 aaPredicted RBP16.37■□□□□ 0.21
SMARCAL1-205ENST00000425815 MSANTD1Q6ZTZ1 278 aa16.37■□□□□ 0.21
SMARCAL1-205ENST00000425815 PLEKHM3Q6ZWE6 761 aa16.37■□□□□ 0.21
SMARCAL1-205ENST00000425815 OR6K3Q8NGY3 331 aa16.37■□□□□ 0.21
SMARCAL1-205ENST00000425815 RNF128Q8TEB7 428 aa16.37■□□□□ 0.21
SMARCAL1-205ENST00000425815 ST8SIA1Q92185 356 aa16.37■□□□□ 0.21
SMARCAL1-205ENST00000425815 CNOT9Q92600 299 aaKnown RBP16.37■□□□□ 0.21
SMARCAL1-205ENST00000425815 AURKBQ96GD4 344 aaPredicted RBP16.37■□□□□ 0.21
SMARCAL1-205ENST00000425815 PAIP1Q9H074 479 aaKnown RBP16.37■□□□□ 0.21
SMARCAL1-205ENST00000425815 MTHFD2LQ9H903 347 aaPredicted RBP16.37■□□□□ 0.21
SMARCAL1-205ENST00000425815 TPT1P8Q9HAU6 139 aa16.37■□□□□ 0.21
SMARCAL1-205ENST00000425815 TCF7L2Q9NQB0 619 aa16.37■□□□□ 0.21
SMARCAL1-205ENST00000425815 GLRX2Q9NS18 164 aa16.37■□□□□ 0.21
SMARCAL1-205ENST00000425815 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.37■□□□□ 0.21
SMARCAL1-205ENST00000425815 ING1Q9UK53 422 aaPredicted RBP16.37■□□□□ 0.21
SMARCAL1-205ENST00000425815 TESMINQ9Y4I5 508 aa16.37■□□□□ 0.21
SMARCAL1-205ENST00000425815 HRNRQ86YZ3 2850 aaPredicted RBP16.37■□□□□ 0.21
SMARCAL1-205ENST00000425815 GJE1A6NN92 205 aa16.36■□□□□ 0.21
SMARCAL1-205ENST00000425815 SIAH2O43255 324 aa16.36■□□□□ 0.21
SMARCAL1-205ENST00000425815 ETFAP13804 333 aa16.36■□□□□ 0.21
SMARCAL1-205ENST00000425815 POU2F1P14859 743 aa16.36■□□□□ 0.21
SMARCAL1-205ENST00000425815 PGCP20142 388 aa16.36■□□□□ 0.21
SMARCAL1-205ENST00000425815 KLK2P20151 261 aa16.36■□□□□ 0.21
SMARCAL1-205ENST00000425815 ENPP1P22413 925 aa16.36■□□□□ 0.21
SMARCAL1-205ENST00000425815 IST1P53990 364 aa16.36■□□□□ 0.21
SMARCAL1-205ENST00000425815 AQP5P55064 265 aa16.36■□□□□ 0.21
SMARCAL1-205ENST00000425815 SLC2A7Q6PXP3 512 aa16.36■□□□□ 0.21
SMARCAL1-205ENST00000425815 ABHD3Q8WU67 409 aa16.36■□□□□ 0.21
SMARCAL1-205ENST00000425815 CKAP2Q8WWK9 683 aa16.36■□□□□ 0.21
SMARCAL1-205ENST00000425815 CPNE4Q96A23 557 aaPredicted RBP16.36■□□□□ 0.21
SMARCAL1-205ENST00000425815 ITCHQ96J02 903 aa16.36■□□□□ 0.21
SMARCAL1-205ENST00000425815 SLC39A3Q9BRY0 314 aa16.36■□□□□ 0.21
SMARCAL1-205ENST00000425815 CCDC28BQ9BUN5 200 aa16.36■□□□□ 0.21
SMARCAL1-205ENST00000425815 CCDC106Q9BWC9 280 aa16.36■□□□□ 0.21
SMARCAL1-205ENST00000425815 PLEKHF2Q9H8W4 249 aa16.36■□□□□ 0.21
SMARCAL1-205ENST00000425815 EXOSC3Q9NQT5 275 aaKnown RBP16.36■□□□□ 0.21
SMARCAL1-205ENST00000425815 INTS9Q9NV88 658 aaKnown RBP16.36■□□□□ 0.21
SMARCAL1-205ENST00000425815 KLHL28Q9NXS3 571 aa16.36■□□□□ 0.21
SMARCAL1-205ENST00000425815 NDRG3Q9UGV2 375 aa16.36■□□□□ 0.21
SMARCAL1-205ENST00000425815 EMC9Q9Y3B6 208 aa16.36■□□□□ 0.21
SMARCAL1-205ENST00000425815 PCDHB14Q9Y5E9 798 aa16.36■□□□□ 0.21
SMARCAL1-205ENST00000425815 SPG11Q96JI7 2443 aa16.36■□□□□ 0.21
SMARCAL1-205ENST00000425815 CCDC168Q8NDH2 2452 aa16.36■□□□□ 0.21
SMARCAL1-205ENST00000425815 C16orf97H3BN30 126 aa16.35■□□□□ 0.21
SMARCAL1-205ENST00000425815 PLGP00747 810 aaPredicted RBP16.35■□□□□ 0.21
SMARCAL1-205ENST00000425815 TFPTP0C1Z6 253 aa16.35■□□□□ 0.21
SMARCAL1-205ENST00000425815 NR2F1P10589 423 aa16.35■□□□□ 0.21
SMARCAL1-205ENST00000425815 AGTR1P30556 359 aa16.35■□□□□ 0.21
SMARCAL1-205ENST00000425815 RYKP34925 604 aa16.35■□□□□ 0.21
SMARCAL1-205ENST00000425815 MAGEA8P43361 318 aa16.35■□□□□ 0.21
SMARCAL1-205ENST00000425815 CTBP2P56545 445 aa16.35■□□□□ 0.21
SMARCAL1-205ENST00000425815 RAC3P60763 192 aa16.35■□□□□ 0.21
SMARCAL1-205ENST00000425815 MERTKQ12866 999 aa16.35■□□□□ 0.21
SMARCAL1-205ENST00000425815 NUFIP2Q7Z417 695 aaKnown RBP16.35■□□□□ 0.21
SMARCAL1-205ENST00000425815 TUSC5Q8IXB3 177 aa16.35■□□□□ 0.21
SMARCAL1-205ENST00000425815 RMND5AQ9H871 391 aa16.35■□□□□ 0.21
SMARCAL1-205ENST00000425815 TIGARQ9NQ88 270 aa16.35■□□□□ 0.21
SMARCAL1-205ENST00000425815 CTPS2Q9NRF8 586 aa16.35■□□□□ 0.21
SMARCAL1-205ENST00000425815 SLAMF8Q9P0V8 285 aa16.35■□□□□ 0.21
SMARCAL1-205ENST00000425815 ST6GALNAC2Q9UJ37 374 aa16.35■□□□□ 0.21
SMARCAL1-205ENST00000425815 IGHV3-15A0A0B4J1V0 119 aa16.34■□□□□ 0.21
SMARCAL1-205ENST00000425815 AP3D1O14617 1153 aa16.34■□□□□ 0.21
SMARCAL1-205ENST00000425815 POLR3GO15318 223 aaPredicted RBP16.34■□□□□ 0.21
SMARCAL1-205ENST00000425815 CRATP43155 626 aa16.34■□□□□ 0.21
SMARCAL1-205ENST00000425815 ANXA11P50995 505 aaKnown RBP16.34■□□□□ 0.21
SMARCAL1-205ENST00000425815 POU4F3Q15319 338 aa16.34■□□□□ 0.21
SMARCAL1-205ENST00000425815 EXOC3L2Q2M3D2 409 aa16.34■□□□□ 0.21
SMARCAL1-205ENST00000425815 GTF2IRD2BQ6EKJ0 949 aa16.34■□□□□ 0.21
SMARCAL1-205ENST00000425815 BLOC1S3Q6QNY0 202 aa16.34■□□□□ 0.21
SMARCAL1-205ENST00000425815 FCRLAQ7L513 359 aa16.34■□□□□ 0.21
SMARCAL1-205ENST00000425815 ZNF550Q7Z398 422 aa16.34■□□□□ 0.21
SMARCAL1-205ENST00000425815 GTF2IRD2Q86UP8 949 aa16.34■□□□□ 0.21
SMARCAL1-205ENST00000425815 ADGRG3Q86Y34 549 aa16.34■□□□□ 0.21
SMARCAL1-205ENST00000425815 MSRB3Q8IXL7 192 aa16.34■□□□□ 0.21
SMARCAL1-205ENST00000425815 ARFGAP2Q8N6H7 521 aa16.34■□□□□ 0.21
SMARCAL1-205ENST00000425815 SLC38A5Q8WUX1 472 aa16.34■□□□□ 0.21
SMARCAL1-205ENST00000425815 TMEM234Q8WY98 164 aa16.34■□□□□ 0.21
SMARCAL1-205ENST00000425815 PMM1Q92871 262 aa16.34■□□□□ 0.21
SMARCAL1-205ENST00000425815 MAGEB18Q96M61 343 aa16.34■□□□□ 0.21
SMARCAL1-205ENST00000425815 CCM2LQ9NUG4 571 aaPredicted RBP16.34■□□□□ 0.21
SMARCAL1-205ENST00000425815 ARGLU1Q9NWB6 273 aaPredicted RBP16.34■□□□□ 0.21
SMARCAL1-205ENST00000425815 SLC25A37Q9NYZ2 338 aa16.34■□□□□ 0.21
SMARCAL1-205ENST00000425815 DSPPQ9NZW4 1301 aa16.34■□□□□ 0.21
SMARCAL1-205ENST00000425815 CELSR1Q9NYQ6 3014 aa16.34■□□□□ 0.21
SMARCAL1-205ENST00000425815 DEFB108AA8MXU0 73 aa16.33■□□□□ 0.2
SMARCAL1-205ENST00000425815 PRKD3O94806 890 aa16.33■□□□□ 0.2
SMARCAL1-205ENST00000425815 ANP32DO95626 131 aa16.33■□□□□ 0.2
SMARCAL1-205ENST00000425815 NUDT7P0C024 238 aa16.33■□□□□ 0.2
SMARCAL1-205ENST00000425815 APOBEC1P41238 236 aaKnown RBP16.33■□□□□ 0.2
SMARCAL1-205ENST00000425815 KCNJ5P48544 419 aa16.33■□□□□ 0.2
SMARCAL1-205ENST00000425815 IDH2P48735 452 aaKnown RBP16.33■□□□□ 0.2
SMARCAL1-205ENST00000425815 HPCAP84074 193 aa16.33■□□□□ 0.2
SMARCAL1-205ENST00000425815 C6orf10Q5SRN2 563 aa16.33■□□□□ 0.2
SMARCAL1-205ENST00000425815 ANKRD34AQ69YU3 496 aa16.33■□□□□ 0.2
SMARCAL1-205ENST00000425815 C3orf33Q6P1S2 294 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms