RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 NUDT14O95848 222 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 FAM228BP0C875 321 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 POU2F1P14859 743 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 UQCRBP14927 111 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 PDGFRAP16234 1089 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 TCP1P17987 556 aaKnown RBP2.59□□□□□ -1.99
LINC01040-201ENST00000425048 UGT1A6P19224 532 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 CYP3A5P20815 502 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 ZP3P21754 424 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 PTPN4P29074 926 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 CASP1P29466 404 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 KRT20P35900 424 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 TRIM23P36406 574 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 PPP1R2P41236 205 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 BTDP43251 543 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 CDK9P50750 372 aaKnown RBP2.59□□□□□ -1.99
LINC01040-201ENST00000425048 NKX2-5P52952 324 aaPredicted RBP2.59□□□□□ -1.99
LINC01040-201ENST00000425048 AP2S1P53680 142 aaPredicted RBP2.59□□□□□ -1.99
LINC01040-201ENST00000425048 MYL6P60660 151 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 NOP14P78316 857 aaKnown RBP2.59□□□□□ -1.99
LINC01040-201ENST00000425048 S100A12P80511 92 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 XIAPP98170 497 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 SLC39A6Q13433 755 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 CUL1Q13616 776 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 ZNF273Q14593 569 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 C16orf72Q14CZ0 275 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 OXA1LQ15070 435 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 DUSP7Q16829 419 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 ZNF829Q3KNS6 432 aaPredicted RBP2.59□□□□□ -1.99
LINC01040-201ENST00000425048 Q3ZCU0 254 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 FUT11Q495W5 492 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 ANKRD20A4Q4UJ75 823 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 SFT2D3Q587I9 215 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 HSP90AA5PQ58FG0 334 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 NHSL2Q5HYW2 709 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 TXNRD3NBQ6F5E7 133 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 CAPN13Q6MZZ7 669 aaPredicted RBP2.59□□□□□ -1.99
LINC01040-201ENST00000425048 PPP1R2P3Q6NXS1 205 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 WDR59Q6PJI9 974 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 IZUMO2Q6UXV1 221 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 ADCK2Q7Z695 626 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 ZNF589Q86UQ0 364 aaPredicted RBP2.59□□□□□ -1.99
LINC01040-201ENST00000425048 ELMOD2Q8IZ81 293 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 FAM9CQ8IZT9 166 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 CCNYL1Q8N7R7 359 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 LINC00301Q8NCQ3 95 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 CHDHQ8NE62 594 aaPredicted RBP2.59□□□□□ -1.99
LINC01040-201ENST00000425048 ZNF680Q8NEM1 530 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 OR6J1Q8NGC5 347 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 GOT1L1Q8NHS2 421 aaPredicted RBP2.59□□□□□ -1.99
LINC01040-201ENST00000425048 LHFPL5Q8TAF8 219 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 CKAP2Q8WWK9 683 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 RASSF5Q8WWW0 418 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 MRPL24Q96A35 216 aaKnown RBP2.59□□□□□ -1.99
LINC01040-201ENST00000425048 PNPLA2Q96AD5 504 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 PAGE5Q96GU1 130 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 CHP1Q99653 195 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 COQ7Q99807 217 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 RIOK1Q9BRS2 568 aaKnown RBP2.59□□□□□ -1.99
LINC01040-201ENST00000425048 TMEM109Q9BVC6 243 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 MROQ9BYG7 248 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 API5Q9BZZ5 524 aaKnown RBP2.59□□□□□ -1.99
LINC01040-201ENST00000425048 NANOGQ9H9S0 305 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 UCK1Q9HA47 277 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 SYTL2Q9HCH5 934 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 SDHAF3Q9NRP4 125 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 FGFR1OP2Q9NVK5 253 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 ANKMY1Q9P2S6 941 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 ENOPH1Q9UHY7 261 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 ANGPTL2Q9UKU9 493 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 DIMT1Q9UNQ2 313 aaKnown RBP2.59□□□□□ -1.99
LINC01040-201ENST00000425048 TFR2Q9UP52 801 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 ERGIC3Q9Y282 383 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 HYOU1Q9Y4L1 999 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 OTOFQ9HC10 1997 aa2.59□□□□□ -2
LINC01040-201ENST00000425048 ZNF142P52746 1687 aaPredicted RBP2.59□□□□□ -2
LINC01040-201ENST00000425048 MED23Q9ULK4 1368 aa2.59□□□□□ -2
LINC01040-201ENST00000425048 TRPM3Q9HCF6 1732 aaPredicted RBP2.59□□□□□ -2
LINC01040-201ENST00000425048 MARF1Q9Y4F3 1742 aaKnown RBP2.59□□□□□ -2
LINC01040-201ENST00000425048 LAMB1P07942 1786 aa2.59□□□□□ -2
LINC01040-201ENST00000425048 DCCP43146 1447 aa2.59□□□□□ -2
LINC01040-201ENST00000425048 NSD3Q9BZ95 1437 aa2.59□□□□□ -2
LINC01040-201ENST00000425048 FER1L6Q2WGJ9 1857 aa2.58□□□□□ -2
LINC01040-201ENST00000425048 DLC1Q96QB1 1528 aa2.58□□□□□ -2
LINC01040-201ENST00000425048 AKAP11Q9UKA4 1901 aa2.58□□□□□ -2
LINC01040-201ENST00000425048 C15orf38-AP3S2A0A0A6YYH1 394 aa2.58□□□□□ -2
LINC01040-201ENST00000425048 ILVBLA1L0T0 632 aa2.58□□□□□ -2
LINC01040-201ENST00000425048 SMCO2A6NFE2 343 aa2.58□□□□□ -2
LINC01040-201ENST00000425048 CCDC160A6NGH7 325 aa2.58□□□□□ -2
LINC01040-201ENST00000425048 PCP4L1A6NKN8 68 aa2.58□□□□□ -2
LINC01040-201ENST00000425048 A8MXQ7 604 aa2.58□□□□□ -2
LINC01040-201ENST00000425048 H3BQV1 296 aa2.58□□□□□ -2
LINC01040-201ENST00000425048 CCDC188H7C350 402 aa2.58□□□□□ -2
LINC01040-201ENST00000425048 CASQ2O14958 399 aaPredicted RBP2.58□□□□□ -2
LINC01040-201ENST00000425048 ZNF263O14978 683 aa2.58□□□□□ -2
LINC01040-201ENST00000425048 PSMD3O43242 534 aa2.58□□□□□ -2
LINC01040-201ENST00000425048 RAD51CO43502 376 aa2.58□□□□□ -2
LINC01040-201ENST00000425048 DENRO43583 198 aaKnown RBP2.58□□□□□ -2
LINC01040-201ENST00000425048 CCDC22O60826 627 aa2.58□□□□□ -2
LINC01040-201ENST00000425048 CDK14O94921 469 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms