RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 DCLRE1BQ9H816 532 aa12.2□□□□□ -0.46
PRPF39-202ENST00000424478 ZC3H12DA2A288 527 aaKnown RBP12.2□□□□□ -0.46
PRPF39-202ENST00000424478 H0YC42 278 aa12.2□□□□□ -0.46
PRPF39-202ENST00000424478 MKRN2OSH3BPM6 223 aa12.2□□□□□ -0.46
PRPF39-202ENST00000424478 GADD45GO95257 159 aa12.2□□□□□ -0.46
PRPF39-202ENST00000424478 ITGB2P05107 769 aa12.2□□□□□ -0.46
PRPF39-202ENST00000424478 TACR3P29371 465 aa12.2□□□□□ -0.46
PRPF39-202ENST00000424478 TPD52P55327 224 aaPredicted RBP12.2□□□□□ -0.46
PRPF39-202ENST00000424478 LY6DQ14210 128 aa12.2□□□□□ -0.46
PRPF39-202ENST00000424478 ELOAQ14241 798 aaKnown RBP12.2□□□□□ -0.46
PRPF39-202ENST00000424478 TIGD3Q6B0B8 471 aa12.2□□□□□ -0.46
PRPF39-202ENST00000424478 PLXDC2Q6UX71 529 aa12.2□□□□□ -0.46
PRPF39-202ENST00000424478 RBMXL3Q8N7X1 1067 aaKnown RBP12.2□□□□□ -0.46
PRPF39-202ENST00000424478 PFN4Q8NHR9 129 aa12.2□□□□□ -0.46
PRPF39-202ENST00000424478 SMPDL3BQ92485 455 aa12.2□□□□□ -0.46
PRPF39-202ENST00000424478 DUS3LQ96G46 650 aaKnown RBP12.2□□□□□ -0.46
PRPF39-202ENST00000424478 C5orf34Q96MH7 638 aa12.2□□□□□ -0.46
PRPF39-202ENST00000424478 SMURF2Q9HAU4 748 aa12.2□□□□□ -0.46
PRPF39-202ENST00000424478 MED17Q9NVC6 651 aa12.2□□□□□ -0.46
PRPF39-202ENST00000424478 CNIH4Q9P003 139 aa12.2□□□□□ -0.46
PRPF39-202ENST00000424478 LYVE1Q9Y5Y7 322 aa12.2□□□□□ -0.46
PRPF39-202ENST00000424478 HNRNPRO43390 633 aaKnown RBP12.2□□□□□ -0.46
PRPF39-202ENST00000424478 TRIM3O75382 744 aaPredicted RBP12.2□□□□□ -0.46
PRPF39-202ENST00000424478 GUSBP08236 651 aa12.2□□□□□ -0.46
PRPF39-202ENST00000424478 GDF1P27539 372 aa12.2□□□□□ -0.46
PRPF39-202ENST00000424478 WIPI1Q5MNZ9 446 aaPredicted RBP12.2□□□□□ -0.46
PRPF39-202ENST00000424478 ZFP1Q6P2D0 407 aa12.2□□□□□ -0.46
PRPF39-202ENST00000424478 GRAMD2AQ8IUY3 354 aa12.2□□□□□ -0.46
PRPF39-202ENST00000424478 GALNT4Q8N4A0 578 aa12.2□□□□□ -0.46
PRPF39-202ENST00000424478 C3orf49Q96BT1 292 aa12.2□□□□□ -0.46
PRPF39-202ENST00000424478 H3BML4 177 aa12.19□□□□□ -0.46
PRPF39-202ENST00000424478 TNFRSF11BO00300 401 aa12.19□□□□□ -0.46
PRPF39-202ENST00000424478 NME2P1O60361 137 aa12.19□□□□□ -0.46
PRPF39-202ENST00000424478 CD46P15529 392 aa12.19□□□□□ -0.46
PRPF39-202ENST00000424478 CNR1P21554 472 aa12.19□□□□□ -0.46
PRPF39-202ENST00000424478 NME2P22392 152 aa12.19□□□□□ -0.46
PRPF39-202ENST00000424478 ADH7P40394 386 aa12.19□□□□□ -0.46
PRPF39-202ENST00000424478 COPZ1P61923 177 aa12.19□□□□□ -0.46
PRPF39-202ENST00000424478 IL1RL1Q01638 556 aa12.19□□□□□ -0.46
PRPF39-202ENST00000424478 PLGLB1Q02325 96 aa12.19□□□□□ -0.46
PRPF39-202ENST00000424478 MERTKQ12866 999 aa12.19□□□□□ -0.46
PRPF39-202ENST00000424478 ATP6AP1Q15904 470 aa12.19□□□□□ -0.46
PRPF39-202ENST00000424478 GXYLT1Q4G148 440 aa12.19□□□□□ -0.46
PRPF39-202ENST00000424478 SLC30A6Q6NXT4 461 aa12.19□□□□□ -0.46
PRPF39-202ENST00000424478 PODNL1Q6PEZ8 512 aa12.19□□□□□ -0.46
PRPF39-202ENST00000424478 ZNF605Q86T29 641 aa12.19□□□□□ -0.46
PRPF39-202ENST00000424478 PRRC1Q96M27 445 aa12.19□□□□□ -0.46
PRPF39-202ENST00000424478 SLC29A1Q99808 456 aa12.19□□□□□ -0.46
PRPF39-202ENST00000424478 PRSS27Q9BQR3 290 aa12.19□□□□□ -0.46
PRPF39-202ENST00000424478 TACO1Q9BSH4 297 aaKnown RBP12.19□□□□□ -0.46
PRPF39-202ENST00000424478 TTTY12Q9BZ98 90 aa12.19□□□□□ -0.46
PRPF39-202ENST00000424478 DEFB127Q9H1M4 99 aa12.19□□□□□ -0.46
PRPF39-202ENST00000424478 TAS2R10Q9NYW0 307 aa12.19□□□□□ -0.46
PRPF39-202ENST00000424478 SNPHO15079 494 aa12.19□□□□□ -0.46
PRPF39-202ENST00000424478 EFNA2O43921 213 aa12.19□□□□□ -0.46
PRPF39-202ENST00000424478 H1F0P07305 194 aaKnown RBP12.19□□□□□ -0.46
PRPF39-202ENST00000424478 RHCEP18577 417 aa12.19□□□□□ -0.46
PRPF39-202ENST00000424478 DPP4P27487 766 aa12.19□□□□□ -0.46
PRPF39-202ENST00000424478 CBFBQ13951 182 aa12.19□□□□□ -0.46
PRPF39-202ENST00000424478 PLEKHN1Q494U1 663 aaPredicted RBP12.19□□□□□ -0.46
PRPF39-202ENST00000424478 AAGABQ6PD74 315 aa12.19□□□□□ -0.46
PRPF39-202ENST00000424478 ASB18Q6ZVZ8 466 aa12.19□□□□□ -0.46
PRPF39-202ENST00000424478 ZNF550Q7Z398 422 aa12.19□□□□□ -0.46
PRPF39-202ENST00000424478 STK32CQ86UX6 486 aa12.19□□□□□ -0.46
PRPF39-202ENST00000424478 CMIPQ8IY22 773 aa12.19□□□□□ -0.46
PRPF39-202ENST00000424478 TOR1AIP2Q8NFQ8 470 aa12.19□□□□□ -0.46
PRPF39-202ENST00000424478 ZNF597Q96LX8 424 aa12.19□□□□□ -0.46
PRPF39-202ENST00000424478 REEP1Q9H902 201 aa12.19□□□□□ -0.46
PRPF39-202ENST00000424478 C20orf141Q9NUB4 165 aa12.19□□□□□ -0.46
PRPF39-202ENST00000424478 STX18Q9P2W9 335 aaKnown RBP12.19□□□□□ -0.46
PRPF39-202ENST00000424478 RPS6KB2Q9UBS0 482 aa12.19□□□□□ -0.46
PRPF39-202ENST00000424478 SLC6A5Q9Y345 797 aa12.19□□□□□ -0.46
PRPF39-202ENST00000424478 SOCS2O14508 198 aa12.18□□□□□ -0.46
PRPF39-202ENST00000424478 LYPD3O95274 346 aa12.18□□□□□ -0.46
PRPF39-202ENST00000424478 ELAVL4P26378 380 aaKnown RBP12.18□□□□□ -0.46
PRPF39-202ENST00000424478 SHC1P29353 583 aa12.18□□□□□ -0.46
PRPF39-202ENST00000424478 STARP49675 285 aa12.18□□□□□ -0.46
PRPF39-202ENST00000424478 UCNP55089 124 aa12.18□□□□□ -0.46
PRPF39-202ENST00000424478 RAET1LQ5VY80 246 aa12.18□□□□□ -0.46
PRPF39-202ENST00000424478 IGFL2Q6UWQ7 119 aa12.18□□□□□ -0.46
PRPF39-202ENST00000424478 ZADH2Q8N4Q0 377 aa12.18□□□□□ -0.46
PRPF39-202ENST00000424478 POC1BQ8TC44 478 aa12.18□□□□□ -0.46
PRPF39-202ENST00000424478 PMM1Q92871 262 aa12.18□□□□□ -0.46
PRPF39-202ENST00000424478 ALPK1Q96QP1 1244 aa12.18□□□□□ -0.46
PRPF39-202ENST00000424478 TMEM27Q9HBJ8 222 aa12.18□□□□□ -0.46
PRPF39-202ENST00000424478 DNAJB9Q9UBS3 223 aa12.18□□□□□ -0.46
PRPF39-202ENST00000424478 TESQ9UGI8 421 aaKnown RBP12.18□□□□□ -0.46
PRPF39-202ENST00000424478 OSGIN1Q9UJX0 560 aa12.18□□□□□ -0.46
PRPF39-202ENST00000424478 LIPGQ9Y5X9 500 aa12.18□□□□□ -0.46
PRPF39-202ENST00000424478 A0A0B4J2E0 115 aa12.18□□□□□ -0.46
PRPF39-202ENST00000424478 A0A1B0GX12 115 aa12.18□□□□□ -0.46
PRPF39-202ENST00000424478 PRKCAP17252 672 aa12.18□□□□□ -0.46
PRPF39-202ENST00000424478 UGT2B15P54855 530 aa12.18□□□□□ -0.46
PRPF39-202ENST00000424478 PIWIL3Q7Z3Z3 882 aaKnown RBP12.18□□□□□ -0.46
PRPF39-202ENST00000424478 GALNT5Q7Z7M9 940 aa12.18□□□□□ -0.46
PRPF39-202ENST00000424478 EXD3Q8N9H8 876 aa12.18□□□□□ -0.46
PRPF39-202ENST00000424478 KDF1Q8NAX2 398 aaPredicted RBP12.18□□□□□ -0.46
PRPF39-202ENST00000424478 GTPBP3Q969Y2 492 aaKnown RBP12.18□□□□□ -0.46
PRPF39-202ENST00000424478 C1GALT1C1Q96EU7 318 aa12.18□□□□□ -0.46
PRPF39-202ENST00000424478 TAAR6Q96RI8 345 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms