RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 DNAJC14Q6Y2X3 702 aaPredicted RBP13.71□□□□□ -0.21
NUP50-204ENST00000417702 LRRC74BQ6ZQY2 392 aa13.71□□□□□ -0.21
NUP50-204ENST00000417702 CDC20BQ86Y33 519 aa13.71□□□□□ -0.21
NUP50-204ENST00000417702 ANKFN1Q8N957 763 aa13.71□□□□□ -0.21
NUP50-204ENST00000417702 ZNF610Q8N9Z0 462 aa13.71□□□□□ -0.21
NUP50-204ENST00000417702 ZNF563Q8TA94 476 aa13.71□□□□□ -0.21
NUP50-204ENST00000417702 PNPT1Q8TCS8 783 aaKnown RBP13.71□□□□□ -0.21
NUP50-204ENST00000417702 ZFP90Q8TF47 636 aa13.71□□□□□ -0.21
NUP50-204ENST00000417702 ROBO4Q8WZ75 1007 aa13.71□□□□□ -0.21
NUP50-204ENST00000417702 NRGNQ92686 78 aa13.71□□□□□ -0.21
NUP50-204ENST00000417702 SLCO1B3Q9NPD5 702 aa13.71□□□□□ -0.21
NUP50-204ENST00000417702 FANCFQ9NPI8 374 aa13.71□□□□□ -0.21
NUP50-204ENST00000417702 TCF7L2Q9NQB0 619 aa13.71□□□□□ -0.21
NUP50-204ENST00000417702 CSMD1Q96PZ7 3565 aa13.71□□□□□ -0.22
NUP50-204ENST00000417702 FAM234BA2RU67 622 aa13.7□□□□□ -0.22
NUP50-204ENST00000417702 PRAMEF27A3QJZ7 478 aa13.7□□□□□ -0.22
NUP50-204ENST00000417702 C1QCP02747 245 aa13.7□□□□□ -0.22
NUP50-204ENST00000417702 ZCCHC18P0CG32 403 aa13.7□□□□□ -0.22
NUP50-204ENST00000417702 UGT2B10P36537 528 aa13.7□□□□□ -0.22
NUP50-204ENST00000417702 MERTKQ12866 999 aa13.7□□□□□ -0.22
NUP50-204ENST00000417702 GNA13Q14344 377 aa13.7□□□□□ -0.22
NUP50-204ENST00000417702 RNPS1Q15287 305 aaKnown RBP13.7□□□□□ -0.22
NUP50-204ENST00000417702 SYPL1Q16563 259 aa13.7□□□□□ -0.22
NUP50-204ENST00000417702 ZNF239Q16600 458 aaKnown RBP13.7□□□□□ -0.22
NUP50-204ENST00000417702 EXOC3L2Q2M3D2 409 aa13.7□□□□□ -0.22
NUP50-204ENST00000417702 COX20Q5RI15 118 aa13.7□□□□□ -0.22
NUP50-204ENST00000417702 C6orf10Q5SRN2 563 aa13.7□□□□□ -0.22
NUP50-204ENST00000417702 C3orf33Q6P1S2 294 aa13.7□□□□□ -0.22
NUP50-204ENST00000417702 HMGN2P46Q86SG4 172 aa13.7□□□□□ -0.22
NUP50-204ENST00000417702 STK32CQ86UX6 486 aa13.7□□□□□ -0.22
NUP50-204ENST00000417702 CMIPQ8IY22 773 aa13.7□□□□□ -0.22
NUP50-204ENST00000417702 FAM71CQ8NEG0 241 aa13.7□□□□□ -0.22
NUP50-204ENST00000417702 OR9I1Q8NGQ6 314 aa13.7□□□□□ -0.22
NUP50-204ENST00000417702 PMM1Q92871 262 aa13.7□□□□□ -0.22
NUP50-204ENST00000417702 NINJ1Q92982 152 aa13.7□□□□□ -0.22
NUP50-204ENST00000417702 ZG16BQ96DA0 208 aa13.7□□□□□ -0.22
NUP50-204ENST00000417702 MED18Q9BUE0 208 aa13.7□□□□□ -0.22
NUP50-204ENST00000417702 SRXN1Q9BYN0 137 aa13.7□□□□□ -0.22
NUP50-204ENST00000417702 MTHFD2LQ9H903 347 aaPredicted RBP13.7□□□□□ -0.22
NUP50-204ENST00000417702 PLSCR4Q9NRQ2 329 aa13.7□□□□□ -0.22
NUP50-204ENST00000417702 ACER3Q9NUN7 267 aa13.7□□□□□ -0.22
NUP50-204ENST00000417702 TESMINQ9Y4I5 508 aa13.7□□□□□ -0.22
NUP50-204ENST00000417702 AGAP5A6NIR3 686 aa13.69□□□□□ -0.22
NUP50-204ENST00000417702 CHRM4P08173 479 aa13.69□□□□□ -0.22
NUP50-204ENST00000417702 RYKP34925 604 aa13.69□□□□□ -0.22
NUP50-204ENST00000417702 CRATP43155 626 aa13.69□□□□□ -0.22
NUP50-204ENST00000417702 IDH3AP50213 366 aa13.69□□□□□ -0.22
NUP50-204ENST00000417702 RAC3P60763 192 aa13.69□□□□□ -0.22
NUP50-204ENST00000417702 TMEM201Q5SNT2 666 aa13.69□□□□□ -0.22
NUP50-204ENST00000417702 FCRLAQ7L513 359 aa13.69□□□□□ -0.22
NUP50-204ENST00000417702 PEX5LQ8IYB4 626 aa13.69□□□□□ -0.22
NUP50-204ENST00000417702 RNF128Q8TEB7 428 aa13.69□□□□□ -0.22
NUP50-204ENST00000417702 ABHD3Q8WU67 409 aa13.69□□□□□ -0.22
NUP50-204ENST00000417702 VPS33AQ96AX1 596 aa13.69□□□□□ -0.22
NUP50-204ENST00000417702 ZNF524Q96C55 264 aa13.69□□□□□ -0.22
NUP50-204ENST00000417702 WFIKKN1Q96NZ8 548 aa13.69□□□□□ -0.22
NUP50-204ENST00000417702 CCDC28BQ9BUN5 200 aa13.69□□□□□ -0.22
NUP50-204ENST00000417702 KLHL4Q9C0H6 718 aa13.69□□□□□ -0.22
NUP50-204ENST00000417702 QRSL1Q9H0R6 528 aaKnown RBP13.69□□□□□ -0.22
NUP50-204ENST00000417702 SLC38A1Q9H2H9 487 aa13.69□□□□□ -0.22
NUP50-204ENST00000417702 COQ10BQ9H8M1 238 aa13.69□□□□□ -0.22
NUP50-204ENST00000417702 TPT1P8Q9HAU6 139 aa13.69□□□□□ -0.22
NUP50-204ENST00000417702 EXOSC3Q9NQT5 275 aaKnown RBP13.69□□□□□ -0.22
NUP50-204ENST00000417702 ZNF226Q9NYT6 803 aa13.69□□□□□ -0.22
NUP50-204ENST00000417702 CALML5Q9NZT1 146 aa13.69□□□□□ -0.22
NUP50-204ENST00000417702 P2RX2Q9UBL9 471 aa13.69□□□□□ -0.22
NUP50-204ENST00000417702 ST6GALNAC2Q9UJ37 374 aa13.69□□□□□ -0.22
NUP50-204ENST00000417702 SPIN1Q9Y657 262 aaPredicted RBP13.69□□□□□ -0.22
NUP50-204ENST00000417702 A0A1W2PNR3 127 aa13.68□□□□□ -0.22
NUP50-204ENST00000417702 TMEM247A6NEH6 219 aa13.68□□□□□ -0.22
NUP50-204ENST00000417702 PRKD3O94806 890 aa13.68□□□□□ -0.22
NUP50-204ENST00000417702 HRGP04196 525 aa13.68□□□□□ -0.22
NUP50-204ENST00000417702 DBIP07108 87 aaKnown RBP13.68□□□□□ -0.22
NUP50-204ENST00000417702 IL7RP16871 459 aa13.68□□□□□ -0.22
NUP50-204ENST00000417702 DNASE1P24855 282 aa13.68□□□□□ -0.22
NUP50-204ENST00000417702 AGTR1P30556 359 aa13.68□□□□□ -0.22
NUP50-204ENST00000417702 APOBEC1P41238 236 aaKnown RBP13.68□□□□□ -0.22
NUP50-204ENST00000417702 MRPL19P49406 292 aaKnown RBP13.68□□□□□ -0.22
NUP50-204ENST00000417702 ART1P52961 327 aa13.68□□□□□ -0.22
NUP50-204ENST00000417702 AQP5P55064 265 aa13.68□□□□□ -0.22
NUP50-204ENST00000417702 POU4F3Q15319 338 aa13.68□□□□□ -0.22
NUP50-204ENST00000417702 BEND4Q6ZU67 534 aa13.68□□□□□ -0.22
NUP50-204ENST00000417702 PLEKHM3Q6ZWE6 761 aa13.68□□□□□ -0.22
NUP50-204ENST00000417702 SLC43A2Q8N370 569 aa13.68□□□□□ -0.22
NUP50-204ENST00000417702 SLC25A43Q8WUT9 341 aaPredicted RBP13.68□□□□□ -0.22
NUP50-204ENST00000417702 WDR60Q8WVS4 1066 aa13.68□□□□□ -0.22
NUP50-204ENST00000417702 OR5B2Q96R09 309 aa13.68□□□□□ -0.22
NUP50-204ENST00000417702 CACYBPQ9HB71 228 aaKnown RBP13.68□□□□□ -0.22
NUP50-204ENST00000417702 GP6Q9HCN6 339 aa13.68□□□□□ -0.22
NUP50-204ENST00000417702 SLC6A13Q9NSD5 602 aa13.68□□□□□ -0.22
NUP50-204ENST00000417702 THUMPD1Q9NXG2 353 aaKnown RBP13.68□□□□□ -0.22
NUP50-204ENST00000417702 KLHL28Q9NXS3 571 aa13.68□□□□□ -0.22
NUP50-204ENST00000417702 CLDN24A6NM45 220 aa13.67□□□□□ -0.22
NUP50-204ENST00000417702 DYNC1I1O14576 645 aa13.67□□□□□ -0.22
NUP50-204ENST00000417702 BCAS1O75363 584 aaPredicted RBP13.67□□□□□ -0.22
NUP50-204ENST00000417702 TFPIP10646 304 aa13.67□□□□□ -0.22
NUP50-204ENST00000417702 ETFAP13804 333 aa13.67□□□□□ -0.22
NUP50-204ENST00000417702 UQCRBP14927 111 aa13.67□□□□□ -0.22
NUP50-204ENST00000417702 CD1EP15812 388 aa13.67□□□□□ -0.22
NUP50-204ENST00000417702 IST1P53990 364 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms