RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 FNDC5Q8NAU1 212 aa13.12□□□□□ -0.31
RPS28-201ENST00000417088 OR2W6PQ8NHA6 318 aa13.12□□□□□ -0.31
RPS28-201ENST00000417088 ZNF75CPQ92670 426 aaPredicted RBP13.12□□□□□ -0.31
RPS28-201ENST00000417088 ZNF775Q96BV0 537 aaPredicted RBP13.12□□□□□ -0.31
RPS28-201ENST00000417088 OR5B2Q96R09 309 aa13.12□□□□□ -0.31
RPS28-201ENST00000417088 ZNF300Q96RE9 604 aaPredicted RBP13.12□□□□□ -0.31
RPS28-201ENST00000417088 PRPF18Q99633 342 aaKnown RBP13.12□□□□□ -0.31
RPS28-201ENST00000417088 TRIM2Q9C040 744 aa13.12□□□□□ -0.31
RPS28-201ENST00000417088 BHLHE41Q9C0J9 482 aaPredicted RBP13.12□□□□□ -0.31
RPS28-201ENST00000417088 NMUR2Q9GZQ4 415 aa13.12□□□□□ -0.31
RPS28-201ENST00000417088 QRSL1Q9H0R6 528 aaKnown RBP13.12□□□□□ -0.31
RPS28-201ENST00000417088 SLCO5A1Q9H2Y9 848 aa13.12□□□□□ -0.31
RPS28-201ENST00000417088 SERHL2Q9H4I8 314 aa13.12□□□□□ -0.31
RPS28-201ENST00000417088 L2HGDHQ9H9P8 463 aa13.12□□□□□ -0.31
RPS28-201ENST00000417088 ZDHHC2Q9UIJ5 367 aa13.12□□□□□ -0.31
RPS28-201ENST00000417088 KCNE5Q9UJ90 142 aa13.12□□□□□ -0.31
RPS28-201ENST00000417088 STAB1Q9NY15 2570 aa13.11□□□□□ -0.31
RPS28-201ENST00000417088 CENPVL1A0A0U1RR11 272 aa13.11□□□□□ -0.31
RPS28-201ENST00000417088 FCMRO60667 390 aa13.11□□□□□ -0.31
RPS28-201ENST00000417088 RAMP1O60894 148 aa13.11□□□□□ -0.31
RPS28-201ENST00000417088 NDUFS7O75251 213 aa13.11□□□□□ -0.31
RPS28-201ENST00000417088 SKAP2O75563 359 aaPredicted RBP13.11□□□□□ -0.31
RPS28-201ENST00000417088 CD8AP01732 235 aa13.11□□□□□ -0.31
RPS28-201ENST00000417088 PRPS1L1P21108 318 aa13.11□□□□□ -0.31
RPS28-201ENST00000417088 SOAT1P35610 550 aa13.11□□□□□ -0.31
RPS28-201ENST00000417088 RPS26P62854 115 aaKnown RBP13.11□□□□□ -0.31
RPS28-201ENST00000417088 DMTNQ08495 405 aa13.11□□□□□ -0.31
RPS28-201ENST00000417088 FAPQ12884 760 aa13.11□□□□□ -0.31
RPS28-201ENST00000417088 SKP2Q13309 424 aa13.11□□□□□ -0.31
RPS28-201ENST00000417088 GPR68Q15743 365 aa13.11□□□□□ -0.31
RPS28-201ENST00000417088 STK11Q15831 433 aa13.11□□□□□ -0.31
RPS28-201ENST00000417088 ZNF141Q15928 474 aa13.11□□□□□ -0.31
RPS28-201ENST00000417088 TIGD2Q4W5G0 525 aa13.11□□□□□ -0.31
RPS28-201ENST00000417088 C3orf33Q6P1S2 294 aa13.11□□□□□ -0.31
RPS28-201ENST00000417088 CXXC5Q7LFL8 322 aaKnown RBP13.11□□□□□ -0.31
RPS28-201ENST00000417088 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.11□□□□□ -0.31
RPS28-201ENST00000417088 TCP10LQ8TDR4 215 aa13.11□□□□□ -0.31
RPS28-201ENST00000417088 TRAF4Q9BUZ4 470 aaPredicted RBP13.11□□□□□ -0.31
RPS28-201ENST00000417088 THUMPD3Q9BV44 507 aaKnown RBP13.11□□□□□ -0.31
RPS28-201ENST00000417088 DUSP26Q9BV47 211 aa13.11□□□□□ -0.31
RPS28-201ENST00000417088 LAT2Q9GZY6 243 aa13.11□□□□□ -0.31
RPS28-201ENST00000417088 ALPK2Q86TB3 2170 aa13.11□□□□□ -0.31
RPS28-201ENST00000417088 CHD3Q12873 2000 aaKnown RBP13.1□□□□□ -0.31
RPS28-201ENST00000417088 ZNF724A8MTY0 619 aa13.1□□□□□ -0.31
RPS28-201ENST00000417088 SHISA9B4DS77 424 aa13.1□□□□□ -0.31
RPS28-201ENST00000417088 SPAG7O75391 227 aa13.1□□□□□ -0.31
RPS28-201ENST00000417088 CYP7B1O75881 506 aa13.1□□□□□ -0.31
RPS28-201ENST00000417088 IGHV4-39P01824 125 aa13.1□□□□□ -0.31
RPS28-201ENST00000417088 FESP07332 822 aa13.1□□□□□ -0.31
RPS28-201ENST00000417088 G6PDP11413 515 aa13.1□□□□□ -0.31
RPS28-201ENST00000417088 COX5AP20674 150 aa13.1□□□□□ -0.31
RPS28-201ENST00000417088 MATN1P21941 496 aa13.1□□□□□ -0.31
RPS28-201ENST00000417088 IGHV1-2P23083 117 aa13.1□□□□□ -0.31
RPS28-201ENST00000417088 SERPINB5P36952 375 aa13.1□□□□□ -0.31
RPS28-201ENST00000417088 SESN3P58005 492 aa13.1□□□□□ -0.31
RPS28-201ENST00000417088 C21orf58P58505 322 aa13.1□□□□□ -0.31
RPS28-201ENST00000417088 PPA1Q15181 289 aa13.1□□□□□ -0.31
RPS28-201ENST00000417088 BHLHB9Q6PI77 547 aa13.1□□□□□ -0.31
RPS28-201ENST00000417088 DNM1P46Q6ZS02 220 aa13.1□□□□□ -0.31
RPS28-201ENST00000417088 OLIG3Q7RTU3 272 aa13.1□□□□□ -0.31
RPS28-201ENST00000417088 C6orf120Q7Z4R8 191 aa13.1□□□□□ -0.31
RPS28-201ENST00000417088 CLECL1Q8IZS7 167 aa13.1□□□□□ -0.31
RPS28-201ENST00000417088 CLEC4FQ8N1N0 589 aa13.1□□□□□ -0.31
RPS28-201ENST00000417088 RIBC1Q8N443 379 aaPredicted RBP13.1□□□□□ -0.31
RPS28-201ENST00000417088 SPATA3Q8NHX4 192 aa13.1□□□□□ -0.31
RPS28-201ENST00000417088 ST8SIA1Q92185 356 aa13.1□□□□□ -0.31
RPS28-201ENST00000417088 ARL8AQ96BM9 186 aa13.1□□□□□ -0.31
RPS28-201ENST00000417088 TUBGCP3Q96CW5 907 aa13.1□□□□□ -0.31
RPS28-201ENST00000417088 CISD1Q9NZ45 108 aaKnown RBP13.1□□□□□ -0.31
RPS28-201ENST00000417088 NPAP1Q9NZP6 1156 aa13.1□□□□□ -0.31
RPS28-201ENST00000417088 DUXAA6NLW8 204 aa13.09□□□□□ -0.31
RPS28-201ENST00000417088 STX11O75558 287 aa13.09□□□□□ -0.31
RPS28-201ENST00000417088 UGT2B17O75795 530 aa13.09□□□□□ -0.31
RPS28-201ENST00000417088 PGM3O95394 542 aa13.09□□□□□ -0.31
RPS28-201ENST00000417088 AK1P00568 194 aa13.09□□□□□ -0.31
RPS28-201ENST00000417088 CSTAP01040 98 aa13.09□□□□□ -0.31
RPS28-201ENST00000417088 CR1P17927 2039 aa13.09□□□□□ -0.31
RPS28-201ENST00000417088 DIO1P49895 249 aa13.09□□□□□ -0.31
RPS28-201ENST00000417088 CLDN8P56748 225 aa13.09□□□□□ -0.31
RPS28-201ENST00000417088 EMX2Q04743 252 aa13.09□□□□□ -0.31
RPS28-201ENST00000417088 MERTKQ12866 999 aa13.09□□□□□ -0.31
RPS28-201ENST00000417088 PGS1Q32NB8 556 aa13.09□□□□□ -0.31
RPS28-201ENST00000417088 ARHGAP11BQ3KRB8 267 aa13.09□□□□□ -0.31
RPS28-201ENST00000417088 TIMM23BQ5SRD1 257 aa13.09□□□□□ -0.31
RPS28-201ENST00000417088 TMPPEQ6ZT21 453 aa13.09□□□□□ -0.31
RPS28-201ENST00000417088 GALNT5Q7Z7M9 940 aa13.09□□□□□ -0.31
RPS28-201ENST00000417088 DTX2Q86UW9 622 aa13.09□□□□□ -0.31
RPS28-201ENST00000417088 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.09□□□□□ -0.31
RPS28-201ENST00000417088 MUCL1Q96DR8 90 aa13.09□□□□□ -0.31
RPS28-201ENST00000417088 GRIP2Q9C0E4 1043 aa13.09□□□□□ -0.31
RPS28-201ENST00000417088 ZNF350Q9GZX5 532 aa13.09□□□□□ -0.31
RPS28-201ENST00000417088 SERINC1Q9NRX5 453 aa13.09□□□□□ -0.31
RPS28-201ENST00000417088 ACER3Q9NUN7 267 aa13.09□□□□□ -0.31
RPS28-201ENST00000417088 PLCE1Q9P212 2302 aa13.09□□□□□ -0.31
RPS28-201ENST00000417088 GDF2Q9UK05 429 aaPredicted RBP13.09□□□□□ -0.31
RPS28-201ENST00000417088 MKLN1Q9UL63 735 aa13.09□□□□□ -0.31
RPS28-201ENST00000417088 RNF103-CHMP3A0A140T963 221 aa13.08□□□□□ -0.32
RPS28-201ENST00000417088 OR5H1A6NKK0 313 aa13.08□□□□□ -0.32
RPS28-201ENST00000417088 ADAM11O75078 769 aa13.08□□□□□ -0.32
RPS28-201ENST00000417088 UBTFL6P0CB48 400 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms