RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 A0A1W2PPL8 197 aa16.33■□□□□ 0.2
SDCBP-202ENST00000413219 FMO6PO60774 539 aa16.33■□□□□ 0.2
SDCBP-202ENST00000413219 ECDO95905 644 aaPredicted RBP16.33■□□□□ 0.2
SDCBP-202ENST00000413219 HPXP02790 462 aa16.33■□□□□ 0.2
SDCBP-202ENST00000413219 PCCBP05166 539 aa16.33■□□□□ 0.2
SDCBP-202ENST00000413219 MRPL3P09001 348 aaKnown RBP16.33■□□□□ 0.2
SDCBP-202ENST00000413219 UCHL1P09936 223 aa16.33■□□□□ 0.2
SDCBP-202ENST00000413219 IL9P15248 144 aa16.33■□□□□ 0.2
SDCBP-202ENST00000413219 PYCR1P32322 319 aa16.33■□□□□ 0.2
SDCBP-202ENST00000413219 PTGS2P35354 604 aa16.33■□□□□ 0.2
SDCBP-202ENST00000413219 GDNFP39905 211 aa16.33■□□□□ 0.2
SDCBP-202ENST00000413219 POU6F2P78424 691 aaPredicted RBP16.33■□□□□ 0.2
SDCBP-202ENST00000413219 ZNF267Q14586 743 aaPredicted RBP16.33■□□□□ 0.2
SDCBP-202ENST00000413219 SUZ12Q15022 739 aaKnown RBP16.33■□□□□ 0.2
SDCBP-202ENST00000413219 METTL11BQ5VVY1 283 aa16.33■□□□□ 0.2
SDCBP-202ENST00000413219 FAM111BQ6SJ93 734 aa16.33■□□□□ 0.2
SDCBP-202ENST00000413219 WDR88Q6ZMY6 472 aa16.33■□□□□ 0.2
SDCBP-202ENST00000413219 ANKRD33Q7Z3H0 272 aa16.33■□□□□ 0.2
SDCBP-202ENST00000413219 C12orf40Q86WS4 652 aa16.33■□□□□ 0.2
SDCBP-202ENST00000413219 SAMD14Q8IZD0 417 aaPredicted RBP16.33■□□□□ 0.2
SDCBP-202ENST00000413219 FTMTQ8N4E7 242 aa16.33■□□□□ 0.2
SDCBP-202ENST00000413219 GALNT11Q8NCW6 608 aa16.33■□□□□ 0.2
SDCBP-202ENST00000413219 SLAIN1Q8ND83 568 aa16.33■□□□□ 0.2
SDCBP-202ENST00000413219 OR4D9Q8NGE8 314 aa16.33■□□□□ 0.2
SDCBP-202ENST00000413219 OR2T4Q8NH00 348 aa16.33■□□□□ 0.2
SDCBP-202ENST00000413219 OR5J2Q8NH18 312 aa16.33■□□□□ 0.2
SDCBP-202ENST00000413219 PFN4Q8NHR9 129 aa16.33■□□□□ 0.2
SDCBP-202ENST00000413219 NXPE3Q969Y0 559 aa16.33■□□□□ 0.2
SDCBP-202ENST00000413219 LGR4Q9BXB1 951 aa16.33■□□□□ 0.2
SDCBP-202ENST00000413219 XKR8Q9H6D3 395 aa16.33■□□□□ 0.2
SDCBP-202ENST00000413219 METTL17Q9H7H0 456 aaPredicted RBP16.33■□□□□ 0.2
SDCBP-202ENST00000413219 SIGLEC7Q9Y286 467 aa16.33■□□□□ 0.2
SDCBP-202ENST00000413219 PCDHGA9Q9Y5G4 932 aaKnown RBP16.33■□□□□ 0.2
SDCBP-202ENST00000413219 TBC1D3EA0A087X179 549 aa16.32■□□□□ 0.2
SDCBP-202ENST00000413219 A0A1B0GUH1 482 aa16.32■□□□□ 0.2
SDCBP-202ENST00000413219 PRICKLE3O43900 615 aaPredicted RBP16.32■□□□□ 0.2
SDCBP-202ENST00000413219 RNGTTO60942 597 aaKnown RBP16.32■□□□□ 0.2
SDCBP-202ENST00000413219 CFDP00746 253 aaPredicted RBP16.32■□□□□ 0.2
SDCBP-202ENST00000413219 ZNF3P17036 446 aa16.32■□□□□ 0.2
SDCBP-202ENST00000413219 FUT1P19526 365 aa16.32■□□□□ 0.2
SDCBP-202ENST00000413219 RPS4Y1P22090 263 aaKnown RBP16.32■□□□□ 0.2
SDCBP-202ENST00000413219 HTR2AP28223 471 aa16.32■□□□□ 0.2
SDCBP-202ENST00000413219 CCR9P51686 369 aa16.32■□□□□ 0.2
SDCBP-202ENST00000413219 BLVRAP53004 296 aa16.32■□□□□ 0.2
SDCBP-202ENST00000413219 SLC16A1P53985 500 aa16.32■□□□□ 0.2
SDCBP-202ENST00000413219 CRYZQ08257 329 aaKnown RBP16.32■□□□□ 0.2
SDCBP-202ENST00000413219 GAS6Q14393 721 aa16.32■□□□□ 0.2
SDCBP-202ENST00000413219 OR1Q1Q15612 314 aa16.32■□□□□ 0.2
SDCBP-202ENST00000413219 FAAH2Q6GMR7 532 aa16.32■□□□□ 0.2
SDCBP-202ENST00000413219 RPTNQ6XPR3 784 aa16.32■□□□□ 0.2
SDCBP-202ENST00000413219 THSD4Q6ZMP0 1018 aa16.32■□□□□ 0.2
SDCBP-202ENST00000413219 SYS1Q8N2H4 156 aa16.32■□□□□ 0.2
SDCBP-202ENST00000413219 LRRC25Q8N386 305 aaPredicted RBP16.32■□□□□ 0.2
SDCBP-202ENST00000413219 EID2Q8N6I1 236 aa16.32■□□□□ 0.2
SDCBP-202ENST00000413219 MFSD9Q8NBP5 474 aa16.32■□□□□ 0.2
SDCBP-202ENST00000413219 OR7G2Q8NG99 324 aa16.32■□□□□ 0.2
SDCBP-202ENST00000413219 THAP4Q8WY91 577 aa16.32■□□□□ 0.2
SDCBP-202ENST00000413219 C10orf90Q96M02 699 aa16.32■□□□□ 0.2
SDCBP-202ENST00000413219 HDAC8Q9BY41 377 aa16.32■□□□□ 0.2
SDCBP-202ENST00000413219 WDR26Q9H7D7 661 aa16.32■□□□□ 0.2
SDCBP-202ENST00000413219 C20orf141Q9NUB4 165 aa16.32■□□□□ 0.2
SDCBP-202ENST00000413219 APOBEC3BQ9UH17 382 aaKnown RBP16.32■□□□□ 0.2
SDCBP-202ENST00000413219 CLEC4AQ9UMR7 237 aa16.32■□□□□ 0.2
SDCBP-202ENST00000413219 HCFC2Q9Y5Z7 792 aa16.32■□□□□ 0.2
SDCBP-202ENST00000413219 A0A1W2PRG6 482 aa16.31■□□□□ 0.2
SDCBP-202ENST00000413219 PRRT4C9JH25 899 aa16.31■□□□□ 0.2
SDCBP-202ENST00000413219 TMEM127O75204 238 aa16.31■□□□□ 0.2
SDCBP-202ENST00000413219 DBIP07108 87 aaKnown RBP16.31■□□□□ 0.2
SDCBP-202ENST00000413219 CLTBP09497 229 aa16.31■□□□□ 0.2
SDCBP-202ENST00000413219 PTNP21246 168 aa16.31■□□□□ 0.2
SDCBP-202ENST00000413219 NDUFS1P28331 727 aa16.31■□□□□ 0.2
SDCBP-202ENST00000413219 SELENOPP49908 381 aa16.31■□□□□ 0.2
SDCBP-202ENST00000413219 AP3S2P59780 193 aa16.31■□□□□ 0.2
SDCBP-202ENST00000413219 PRSS42Q7Z5A4 293 aa16.31■□□□□ 0.2
SDCBP-202ENST00000413219 SLC43A2Q8N370 569 aa16.31■□□□□ 0.2
SDCBP-202ENST00000413219 SPICQ8N5J4 248 aa16.31■□□□□ 0.2
SDCBP-202ENST00000413219 OR11G2Q8NGC1 345 aa16.31■□□□□ 0.2
SDCBP-202ENST00000413219 OR4C6Q8NH72 309 aa16.31■□□□□ 0.2
SDCBP-202ENST00000413219 PHYHIPQ92561 330 aa16.31■□□□□ 0.2
SDCBP-202ENST00000413219 SMIM19Q96E16 107 aa16.31■□□□□ 0.2
SDCBP-202ENST00000413219 SDF2Q99470 211 aa16.31■□□□□ 0.2
SDCBP-202ENST00000413219 RBCK1Q9BYM8 510 aa16.31■□□□□ 0.2
SDCBP-202ENST00000413219 PPA2Q9H2U2 334 aa16.31■□□□□ 0.2
SDCBP-202ENST00000413219 NPDC1Q9NQX5 325 aaPredicted RBP16.31■□□□□ 0.2
SDCBP-202ENST00000413219 ADH1CP00326 375 aa16.31■□□□□ 0.2
SDCBP-202ENST00000413219 PSMB1P20618 241 aaKnown RBP16.31■□□□□ 0.2
SDCBP-202ENST00000413219 NOS3P29474 1203 aa16.31■□□□□ 0.2
SDCBP-202ENST00000413219 P2RY2P41231 377 aa16.31■□□□□ 0.2
SDCBP-202ENST00000413219 CDK5R1Q15078 307 aa16.31■□□□□ 0.2
SDCBP-202ENST00000413219 OR2L13Q8N349 312 aa16.31■□□□□ 0.2
SDCBP-202ENST00000413219 OR13C5Q8NGS8 318 aa16.31■□□□□ 0.2
SDCBP-202ENST00000413219 LHFPL5Q8TAF8 219 aa16.31■□□□□ 0.2
SDCBP-202ENST00000413219 BPIFA2Q96DR5 249 aa16.31■□□□□ 0.2
SDCBP-202ENST00000413219 ZNF350Q9GZX5 532 aa16.31■□□□□ 0.2
SDCBP-202ENST00000413219 MED9Q9NWA0 146 aa16.31■□□□□ 0.2
SDCBP-202ENST00000413219 KCMF1Q9P0J7 381 aa16.31■□□□□ 0.2
SDCBP-202ENST00000413219 DENND4AQ7Z401 1863 aa16.3■□□□□ 0.2
SDCBP-202ENST00000413219 PTP4A3O75365 173 aa16.3■□□□□ 0.2
SDCBP-202ENST00000413219 HOXB3P14651 431 aaPredicted RBP16.3■□□□□ 0.2
SDCBP-202ENST00000413219 DRD5P21918 477 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms