RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 TRAFD1O14545 582 aaPredicted RBP4.14□□□□□ -1.75
LSM5-205ENST00000409952 KDELR3O43731 214 aa4.14□□□□□ -1.75
LSM5-205ENST00000409952 CEACAM4O75871 244 aa4.14□□□□□ -1.75
LSM5-205ENST00000409952 CLPTM1O96005 669 aa4.14□□□□□ -1.75
LSM5-205ENST00000409952 SERPINE2P07093 398 aa4.14□□□□□ -1.75
LSM5-205ENST00000409952 ACAA1P09110 424 aaPredicted RBP4.14□□□□□ -1.75
LSM5-205ENST00000409952 CT62P0C5K7 136 aa4.14□□□□□ -1.75
LSM5-205ENST00000409952 MAGEA9P43362 315 aa4.14□□□□□ -1.75
LSM5-205ENST00000409952 GPR4P46093 362 aa4.14□□□□□ -1.75
LSM5-205ENST00000409952 RFX3P48380 749 aa4.14□□□□□ -1.75
LSM5-205ENST00000409952 POU3F4P49335 361 aa4.14□□□□□ -1.75
LSM5-205ENST00000409952 VGLL4Q14135 290 aa4.14□□□□□ -1.75
LSM5-205ENST00000409952 NDUFA9Q16795 377 aa4.14□□□□□ -1.75
LSM5-205ENST00000409952 ECSCRQ19T08 205 aa4.14□□□□□ -1.75
LSM5-205ENST00000409952 SLC22A10Q63ZE4 541 aa4.14□□□□□ -1.75
LSM5-205ENST00000409952 LRRC31Q6UY01 552 aa4.14□□□□□ -1.75
LSM5-205ENST00000409952 RBMS3Q6XE24 437 aaKnown RBP4.14□□□□□ -1.75
LSM5-205ENST00000409952 LRRC74BQ6ZQY2 392 aa4.14□□□□□ -1.75
LSM5-205ENST00000409952 ERO1BQ86YB8 467 aa4.14□□□□□ -1.75
LSM5-205ENST00000409952 LACC1Q8IV20 430 aa4.14□□□□□ -1.75
LSM5-205ENST00000409952 BPIFB2Q8N4F0 458 aa4.14□□□□□ -1.75
LSM5-205ENST00000409952 KIR3DL3Q8N743 410 aa4.14□□□□□ -1.75
LSM5-205ENST00000409952 B3GNT7Q8NFL0 401 aa4.14□□□□□ -1.75
LSM5-205ENST00000409952 OR4A4PQ8NGN8 299 aa4.14□□□□□ -1.75
LSM5-205ENST00000409952 OR13A1Q8NGR1 328 aa4.14□□□□□ -1.75
LSM5-205ENST00000409952 OR13C9Q8NGT0 318 aa4.14□□□□□ -1.75
LSM5-205ENST00000409952 OR6S1Q8NH40 331 aa4.14□□□□□ -1.75
LSM5-205ENST00000409952 GPR151Q8TDV0 419 aa4.14□□□□□ -1.75
LSM5-205ENST00000409952 PCNPQ8WW12 178 aaKnown RBP4.14□□□□□ -1.75
LSM5-205ENST00000409952 CXorf40BQ96DE9 158 aa4.14□□□□□ -1.75
LSM5-205ENST00000409952 ZNF641Q96N77 438 aaPredicted RBP4.14□□□□□ -1.75
LSM5-205ENST00000409952 PPA2Q9H2U2 334 aa4.14□□□□□ -1.75
LSM5-205ENST00000409952 RHBGQ9H310 441 aa4.14□□□□□ -1.75
LSM5-205ENST00000409952 GLIPR2Q9H4G4 154 aa4.14□□□□□ -1.75
LSM5-205ENST00000409952 NT5DC2Q9H857 520 aa4.14□□□□□ -1.75
LSM5-205ENST00000409952 NHEJ1Q9H9Q4 299 aaPredicted RBP4.14□□□□□ -1.75
LSM5-205ENST00000409952 C15orf41Q9Y2V0 281 aa4.14□□□□□ -1.75
LSM5-205ENST00000409952 MRPS18CQ9Y3D5 142 aaKnown RBP4.14□□□□□ -1.75
LSM5-205ENST00000409952 MROH7-TTC4A0A0A0MT08 1334 aa4.14□□□□□ -1.75
LSM5-205ENST00000409952 CNTNAP2Q9UHC6 1331 aa4.14□□□□□ -1.75
LSM5-205ENST00000409952 METP08581 1390 aa4.14□□□□□ -1.75
LSM5-205ENST00000409952 KBTBD11-OT1A0A1B0GTJ5 212 aa4.13□□□□□ -1.75
LSM5-205ENST00000409952 CCT8L1PA6NM43 557 aa4.13□□□□□ -1.75
LSM5-205ENST00000409952 NPIPB9F8W1W9 429 aa4.13□□□□□ -1.75
LSM5-205ENST00000409952 H3BMQ9 156 aa4.13□□□□□ -1.75
LSM5-205ENST00000409952 FBP2O00757 339 aa4.13□□□□□ -1.75
LSM5-205ENST00000409952 PSTPIP1O43586 416 aa4.13□□□□□ -1.75
LSM5-205ENST00000409952 ZNF254O75437 659 aa4.13□□□□□ -1.75
LSM5-205ENST00000409952 TRMUO75648 421 aaKnown RBP4.13□□□□□ -1.75
LSM5-205ENST00000409952 OAZ2O95190 189 aa4.13□□□□□ -1.75
LSM5-205ENST00000409952 CRYABP02511 175 aaKnown RBP4.13□□□□□ -1.75
LSM5-205ENST00000409952 MMP1P03956 469 aa4.13□□□□□ -1.75
LSM5-205ENST00000409952 UMPSP11172 480 aa4.13□□□□□ -1.75
LSM5-205ENST00000409952 CLDN18P56856 261 aa4.13□□□□□ -1.75
LSM5-205ENST00000409952 RPL8P62917 257 aaKnown RBP4.13□□□□□ -1.75
LSM5-205ENST00000409952 FASTKQ14296 549 aaKnown RBP4.13□□□□□ -1.75
LSM5-205ENST00000409952 TEAD2Q15562 447 aa4.13□□□□□ -1.75
LSM5-205ENST00000409952 TIGITQ495A1 244 aa4.13□□□□□ -1.75
LSM5-205ENST00000409952 GTDC1Q4AE62 458 aa4.13□□□□□ -1.75
LSM5-205ENST00000409952 C9orf135Q5VTT2 229 aa4.13□□□□□ -1.75
LSM5-205ENST00000409952 OR52W1Q6IF63 320 aa4.13□□□□□ -1.75
LSM5-205ENST00000409952 H3F3CQ6NXT2 135 aa4.13□□□□□ -1.75
LSM5-205ENST00000409952 C6orf89Q6UWU4 347 aa4.13□□□□□ -1.75
LSM5-205ENST00000409952 NIPA1Q7RTP0 329 aa4.13□□□□□ -1.75
LSM5-205ENST00000409952 CATSPERDQ86XM0 798 aa4.13□□□□□ -1.75
LSM5-205ENST00000409952 CD302Q8IX05 232 aa4.13□□□□□ -1.75
LSM5-205ENST00000409952 FAM9CQ8IZT9 166 aa4.13□□□□□ -1.75
LSM5-205ENST00000409952 PELI3Q8N2H9 469 aa4.13□□□□□ -1.75
LSM5-205ENST00000409952 GATSQ8NAP1 163 aa4.13□□□□□ -1.75
LSM5-205ENST00000409952 OR4A15Q8NGL6 344 aa4.13□□□□□ -1.75
LSM5-205ENST00000409952 CLHC1Q8NHS4 586 aa4.13□□□□□ -1.75
LSM5-205ENST00000409952 TM9SF4Q92544 642 aa4.13□□□□□ -1.75
LSM5-205ENST00000409952 KIFAP3Q92845 792 aa4.13□□□□□ -1.75
LSM5-205ENST00000409952 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.13□□□□□ -1.752e-6■■■■■ 59.4
LSM5-205ENST00000409952 ZNF486Q96H40 463 aaPredicted RBP4.13□□□□□ -1.75
LSM5-205ENST00000409952 RCHY1Q96PM5 261 aa4.13□□□□□ -1.75
LSM5-205ENST00000409952 OR5B2Q96R09 309 aa4.13□□□□□ -1.75
LSM5-205ENST00000409952 TNFRSF13CQ96RJ3 184 aa4.13□□□□□ -1.75
LSM5-205ENST00000409952 SLC35A5Q9BS91 424 aa4.13□□□□□ -1.75
LSM5-205ENST00000409952 RACGAP1Q9H0H5 632 aa4.13□□□□□ -1.75
LSM5-205ENST00000409952 OR2AG1Q9H205 316 aa4.13□□□□□ -1.75
LSM5-205ENST00000409952 PARVGQ9HBI0 331 aa4.13□□□□□ -1.75
LSM5-205ENST00000409952 MYOZ2Q9NPC6 264 aa4.13□□□□□ -1.75
LSM5-205ENST00000409952 CUTCQ9NTM9 273 aa4.13□□□□□ -1.75
LSM5-205ENST00000409952 CLN8Q9UBY8 286 aa4.13□□□□□ -1.75
LSM5-205ENST00000409952 KCNG2Q9UJ96 466 aa4.13□□□□□ -1.75
LSM5-205ENST00000409952 PDE10AQ9Y233 779 aa4.13□□□□□ -1.75
LSM5-205ENST00000409952 V9GYY5 206 aaPredicted RBP4.13□□□□□ -1.75
LSM5-205ENST00000409952 ZNF521Q96K83 1311 aa4.13□□□□□ -1.75
LSM5-205ENST00000409952 KCNE1BA0A087WTH5 132 aa4.12□□□□□ -1.75
LSM5-205ENST00000409952 PFKFB2O60825 505 aa4.12□□□□□ -1.75
LSM5-205ENST00000409952 UGT2B17O75795 530 aa4.12□□□□□ -1.75
LSM5-205ENST00000409952 NADKO95544 446 aaPredicted RBP4.12□□□□□ -1.75
LSM5-205ENST00000409952 HPP00738 406 aa4.12□□□□□ -1.75
LSM5-205ENST00000409952 PAX1P15863 534 aa4.12□□□□□ -1.75
LSM5-205ENST00000409952 ZNF10P21506 573 aaPredicted RBP4.12□□□□□ -1.75
LSM5-205ENST00000409952 IFNA8P32881 189 aa4.12□□□□□ -1.75
LSM5-205ENST00000409952 DEKP35659 375 aaKnown RBP4.12□□□□□ -1.75
LSM5-205ENST00000409952 SPAM1P38567 509 aa4.12□□□□□ -1.75
LSM5-205ENST00000409952 OPRD1P41143 372 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms