RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 ELAVL2Q12926 359 aaKnown RBP3.89□□□□□ -1.79
HMGB3P18-201ENST00000406327 UBE2V2Q15819 145 aa3.89□□□□□ -1.79
HMGB3P18-201ENST00000406327 SLC15A2Q16348 729 aa3.89□□□□□ -1.79
HMGB3P18-201ENST00000406327 UBE2SQ16763 222 aa3.89□□□□□ -1.79
HMGB3P18-201ENST00000406327 QRICH1Q2TAL8 776 aa3.89□□□□□ -1.79
HMGB3P18-201ENST00000406327 SLX4IPQ5VYV7 408 aa3.89□□□□□ -1.79
HMGB3P18-201ENST00000406327 TMEM225Q6GV28 225 aa3.89□□□□□ -1.79
HMGB3P18-201ENST00000406327 PNCKQ6P2M8 343 aa3.89□□□□□ -1.79
HMGB3P18-201ENST00000406327 TMEM179Q6ZVK1 233 aa3.89□□□□□ -1.79
HMGB3P18-201ENST00000406327 RPAINQ86UA6 219 aa3.89□□□□□ -1.79
HMGB3P18-201ENST00000406327 ZNF683Q8IZ20 524 aa3.89□□□□□ -1.79
HMGB3P18-201ENST00000406327 PDCL2Q8N4E4 241 aa3.89□□□□□ -1.79
HMGB3P18-201ENST00000406327 CSGALNACT2Q8N6G5 542 aa3.89□□□□□ -1.79
HMGB3P18-201ENST00000406327 FAM133AQ8N9E0 248 aa3.89□□□□□ -1.79
HMGB3P18-201ENST00000406327 ZSCAN4Q8NAM6 433 aaPredicted RBP3.89□□□□□ -1.79
HMGB3P18-201ENST00000406327 ZNRF1Q8ND25 227 aa3.89□□□□□ -1.79
HMGB3P18-201ENST00000406327 PRSS33Q8NF86 280 aa3.89□□□□□ -1.79
HMGB3P18-201ENST00000406327 OR8K1Q8NGG5 319 aa3.89□□□□□ -1.79
HMGB3P18-201ENST00000406327 CTNNBL1Q8WYA6 563 aaPredicted RBP3.89□□□□□ -1.79
HMGB3P18-201ENST00000406327 OSTF1Q92882 214 aa3.89□□□□□ -1.79
HMGB3P18-201ENST00000406327 POM121L2Q96KW2 1035 aa3.89□□□□□ -1.79
HMGB3P18-201ENST00000406327 LINC00479Q96M42 142 aa3.89□□□□□ -1.79
HMGB3P18-201ENST00000406327 TUBGCP2Q9BSJ2 902 aa3.89□□□□□ -1.79
HMGB3P18-201ENST00000406327 CCDC94Q9BW85 323 aaPredicted RBP3.89□□□□□ -1.79
HMGB3P18-201ENST00000406327 RAB34Q9BZG1 259 aa3.89□□□□□ -1.79
HMGB3P18-201ENST00000406327 TDRD3Q9H7E2 651 aaKnown RBP3.89□□□□□ -1.79
HMGB3P18-201ENST00000406327 JPT2Q9H910 190 aa3.89□□□□□ -1.79
HMGB3P18-201ENST00000406327 MRPL39Q9NYK5 338 aaKnown RBP3.89□□□□□ -1.79
HMGB3P18-201ENST00000406327 AIPL1Q9NZN9 384 aa3.89□□□□□ -1.79
HMGB3P18-201ENST00000406327 THAP10Q9P2Z0 257 aaPredicted RBP3.89□□□□□ -1.79
HMGB3P18-201ENST00000406327 MUTYHQ9UIF7 546 aa3.89□□□□□ -1.79
HMGB3P18-201ENST00000406327 RNF115Q9Y4L5 304 aa3.89□□□□□ -1.79
HMGB3P18-201ENST00000406327 MYO5AQ9Y4I1 1855 aaKnown RBP3.89□□□□□ -1.79
HMGB3P18-201ENST00000406327 MYH15Q9Y2K3 1946 aa3.89□□□□□ -1.79
HMGB3P18-201ENST00000406327 KIAA1551Q9HCM1 1747 aa3.89□□□□□ -1.79
HMGB3P18-201ENST00000406327 TEX48A0A1B0GUV7 120 aa3.88□□□□□ -1.79
HMGB3P18-201ENST00000406327 NDUFAF8A1L188 74 aa3.88□□□□□ -1.79
HMGB3P18-201ENST00000406327 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.88□□□□□ -1.79
HMGB3P18-201ENST00000406327 SOCS3O14543 225 aa3.88□□□□□ -1.79
HMGB3P18-201ENST00000406327 CXCL11O14625 94 aa3.88□□□□□ -1.79
HMGB3P18-201ENST00000406327 PPIHO43447 177 aaKnown RBP3.88□□□□□ -1.79
HMGB3P18-201ENST00000406327 SCGNO76038 276 aa3.88□□□□□ -1.79
HMGB3P18-201ENST00000406327 FGFR1OPO95684 399 aaKnown RBP3.88□□□□□ -1.79
HMGB3P18-201ENST00000406327 IGFBP1P08833 259 aaPredicted RBP3.88□□□□□ -1.79
HMGB3P18-201ENST00000406327 H2AFZP0C0S5 128 aa3.88□□□□□ -1.79
HMGB3P18-201ENST00000406327 DBTP11182 482 aaKnown RBP3.88□□□□□ -1.79
HMGB3P18-201ENST00000406327 ATP12AP54707 1039 aa3.88□□□□□ -1.79
HMGB3P18-201ENST00000406327 ACY1Q03154 408 aa3.88□□□□□ -1.79
HMGB3P18-201ENST00000406327 PJVKQ0ZLH3 352 aa3.88□□□□□ -1.79
HMGB3P18-201ENST00000406327 HYAL1Q12794 435 aa3.88□□□□□ -1.79
HMGB3P18-201ENST00000406327 LY6DQ14210 128 aa3.88□□□□□ -1.79
HMGB3P18-201ENST00000406327 ATXN7L3Q14CW9 347 aaPredicted RBP3.88□□□□□ -1.79
HMGB3P18-201ENST00000406327 SIX1Q15475 284 aaPredicted RBP3.88□□□□□ -1.79
HMGB3P18-201ENST00000406327 ZIC1Q15915 447 aa3.88□□□□□ -1.79
HMGB3P18-201ENST00000406327 ADAM5Q6NVV9 412 aa3.88□□□□□ -1.79
HMGB3P18-201ENST00000406327 ZNF613Q6PF04 617 aa3.88□□□□□ -1.79
HMGB3P18-201ENST00000406327 ZNF841Q6ZN19 808 aa3.88□□□□□ -1.79
HMGB3P18-201ENST00000406327 GCNT7Q6ZNI0 430 aa3.88□□□□□ -1.79
HMGB3P18-201ENST00000406327 ZCCHC7Q8N3Z6 543 aaKnown RBP3.88□□□□□ -1.79
HMGB3P18-201ENST00000406327 OR2T3Q8NH03 318 aa3.88□□□□□ -1.79
HMGB3P18-201ENST00000406327 CRYGNQ8WXF5 182 aa3.88□□□□□ -1.79
HMGB3P18-201ENST00000406327 MBOAT7Q96N66 472 aa3.88□□□□□ -1.79
HMGB3P18-201ENST00000406327 ZBTB18Q99592 522 aa3.88□□□□□ -1.79
HMGB3P18-201ENST00000406327 TTYH2Q9BSA4 534 aa3.88□□□□□ -1.79
HMGB3P18-201ENST00000406327 NUP58Q9BVL2 599 aa3.88□□□□□ -1.79
HMGB3P18-201ENST00000406327 VCX2Q9H322 139 aa3.88□□□□□ -1.79
HMGB3P18-201ENST00000406327 GPN2Q9H9Y4 310 aaPredicted RBP3.88□□□□□ -1.79
HMGB3P18-201ENST00000406327 RPH3ALQ9UNE2 315 aa3.88□□□□□ -1.79
HMGB3P18-201ENST00000406327 GSTK1Q9Y2Q3 226 aa3.88□□□□□ -1.79
HMGB3P18-201ENST00000406327 LRP12Q9Y561 859 aa3.88□□□□□ -1.79
HMGB3P18-201ENST00000406327 GMPPBQ9Y5P6 360 aa3.88□□□□□ -1.79
HMGB3P18-201ENST00000406327 SLCO1B1Q9Y6L6 691 aa3.88□□□□□ -1.79
HMGB3P18-201ENST00000406327 A0A1B0GUL6 1792 aa3.88□□□□□ -1.79
HMGB3P18-201ENST00000406327 MAST2Q6P0Q8 1798 aa3.88□□□□□ -1.79
HMGB3P18-201ENST00000406327 TRABD2BA6NFA1 517 aa3.87□□□□□ -1.79
HMGB3P18-201ENST00000406327 TRIM3O75382 744 aaPredicted RBP3.87□□□□□ -1.79
HMGB3P18-201ENST00000406327 SNX4O95219 450 aa3.87□□□□□ -1.79
HMGB3P18-201ENST00000406327 NDUFB10O96000 172 aa3.87□□□□□ -1.79
HMGB3P18-201ENST00000406327 ZNF44P15621 663 aa3.87□□□□□ -1.79
HMGB3P18-201ENST00000406327 NT5EP21589 574 aa3.87□□□□□ -1.79
HMGB3P18-201ENST00000406327 TBXA2RP21731 343 aa3.87□□□□□ -1.79
HMGB3P18-201ENST00000406327 CALB2P22676 271 aa3.87□□□□□ -1.79
HMGB3P18-201ENST00000406327 ARHGDIAP52565 204 aa3.87□□□□□ -1.79
HMGB3P18-201ENST00000406327 CRIP2P52943 208 aaPredicted RBP3.87□□□□□ -1.79
HMGB3P18-201ENST00000406327 PLA2G16P53816 162 aa3.87□□□□□ -1.79
HMGB3P18-201ENST00000406327 SNAP25P60880 206 aa3.87□□□□□ -1.79
HMGB3P18-201ENST00000406327 IRX1P78414 480 aaPredicted RBP3.87□□□□□ -1.79
HMGB3P18-201ENST00000406327 CNTN2Q02246 1040 aa3.87□□□□□ -1.79
HMGB3P18-201ENST00000406327 LRRC63Q05C16 580 aa3.87□□□□□ -1.79
HMGB3P18-201ENST00000406327 FCHO2Q0JRZ9 810 aa3.87□□□□□ -1.79
HMGB3P18-201ENST00000406327 MAPK6Q16659 721 aa3.87□□□□□ -1.79
HMGB3P18-201ENST00000406327 EXOC3L2Q2M3D2 409 aa3.87□□□□□ -1.79
HMGB3P18-201ENST00000406327 GLIPR1L2Q4G1C9 344 aa3.87□□□□□ -1.79
HMGB3P18-201ENST00000406327 C14orf28Q4W4Y0 310 aa3.87□□□□□ -1.79
HMGB3P18-201ENST00000406327 CELF3Q5SZQ8 465 aaKnown RBP3.87□□□□□ -1.79
HMGB3P18-201ENST00000406327 MEDAGQ5VYS4 303 aa3.87□□□□□ -1.79
HMGB3P18-201ENST00000406327 PMF1Q6P1K2 205 aa3.87□□□□□ -1.79
HMGB3P18-201ENST00000406327 EMBQ6PCB8 327 aa3.87□□□□□ -1.79
HMGB3P18-201ENST00000406327 WDR59Q6PJI9 974 aa3.87□□□□□ -1.79
HMGB3P18-201ENST00000406327 ADAMTSL5Q6ZMM2 481 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms