RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 PMM1Q92871 262 aa13.29□□□□□ -0.28
SMIM11A-203ENST00000399299 ZNF524Q96C55 264 aa13.29□□□□□ -0.28
SMIM11A-203ENST00000399299 REXO5Q96IC2 774 aaKnown RBP13.29□□□□□ -0.28
SMIM11A-203ENST00000399299 SRXN1Q9BYN0 137 aa13.29□□□□□ -0.28
SMIM11A-203ENST00000399299 CXXC4Q9H2H0 198 aa13.29□□□□□ -0.28
SMIM11A-203ENST00000399299 SLC38A1Q9H2H9 487 aa13.29□□□□□ -0.28
SMIM11A-203ENST00000399299 LIME1Q9H400 295 aa13.29□□□□□ -0.28
SMIM11A-203ENST00000399299 FANCFQ9NPI8 374 aa13.29□□□□□ -0.28
SMIM11A-203ENST00000399299 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.29□□□□□ -0.28
SMIM11A-203ENST00000399299 ACER3Q9NUN7 267 aa13.29□□□□□ -0.28
SMIM11A-203ENST00000399299 CLEC4AQ9UMR7 237 aa13.29□□□□□ -0.28
SMIM11A-203ENST00000399299 UQCRHLA0A096LP55 91 aa13.28□□□□□ -0.28
SMIM11A-203ENST00000399299 CYP7B1O75881 506 aa13.28□□□□□ -0.28
SMIM11A-203ENST00000399299 C1QCP02747 245 aa13.28□□□□□ -0.28
SMIM11A-203ENST00000399299 GSNP06396 782 aa13.28□□□□□ -0.28
SMIM11A-203ENST00000399299 SLC7A1P30825 629 aa13.28□□□□□ -0.28
SMIM11A-203ENST00000399299 ART1P52961 327 aa13.28□□□□□ -0.28
SMIM11A-203ENST00000399299 SESN3P58005 492 aa13.28□□□□□ -0.28
SMIM11A-203ENST00000399299 RAC3P60763 192 aa13.28□□□□□ -0.28
SMIM11A-203ENST00000399299 KCNJ10P78508 379 aa13.28□□□□□ -0.28
SMIM11A-203ENST00000399299 CHRNEQ04844 493 aa13.28□□□□□ -0.28
SMIM11A-203ENST00000399299 SYPL1Q16563 259 aa13.28□□□□□ -0.28
SMIM11A-203ENST00000399299 TIGD2Q4W5G0 525 aa13.28□□□□□ -0.28
SMIM11A-203ENST00000399299 TTMPQ5BVD1 217 aa13.28□□□□□ -0.28
SMIM11A-203ENST00000399299 PAMR1Q6UXH9 720 aa13.28□□□□□ -0.28
SMIM11A-203ENST00000399299 MIER2Q8N344 545 aa13.28□□□□□ -0.28
SMIM11A-203ENST00000399299 SLC43A2Q8N370 569 aa13.28□□□□□ -0.28
SMIM11A-203ENST00000399299 SLC25A43Q8WUT9 341 aaPredicted RBP13.28□□□□□ -0.28
SMIM11A-203ENST00000399299 ZG16BQ96DA0 208 aa13.28□□□□□ -0.28
SMIM11A-203ENST00000399299 MARK4Q96L34 752 aa13.28□□□□□ -0.28
SMIM11A-203ENST00000399299 WFIKKN1Q96NZ8 548 aa13.28□□□□□ -0.28
SMIM11A-203ENST00000399299 FOXC2Q99958 501 aa13.28□□□□□ -0.28
SMIM11A-203ENST00000399299 TACO1Q9BSH4 297 aaKnown RBP13.28□□□□□ -0.28
SMIM11A-203ENST00000399299 MED18Q9BUE0 208 aa13.28□□□□□ -0.28
SMIM11A-203ENST00000399299 RMND5AQ9H871 391 aa13.28□□□□□ -0.28
SMIM11A-203ENST00000399299 PLEKHF2Q9H8W4 249 aa13.28□□□□□ -0.28
SMIM11A-203ENST00000399299 SERINC1Q9NRX5 453 aa13.28□□□□□ -0.28
SMIM11A-203ENST00000399299 ZNF226Q9NYT6 803 aa13.28□□□□□ -0.28
SMIM11A-203ENST00000399299 PRRC2AP48634 2157 aaKnown RBP13.28□□□□□ -0.28
SMIM11A-203ENST00000399299 MTORP42345 2549 aa13.28□□□□□ -0.28
SMIM11A-203ENST00000399299 MED13LQ71F56 2210 aa13.27□□□□□ -0.28
SMIM11A-203ENST00000399299 AGAP5A6NIR3 686 aa13.27□□□□□ -0.29
SMIM11A-203ENST00000399299 CHRM4P08173 479 aa13.27□□□□□ -0.29
SMIM11A-203ENST00000399299 RPS4Y1P22090 263 aaKnown RBP13.27□□□□□ -0.29
SMIM11A-203ENST00000399299 CRYGSP22914 178 aa13.27□□□□□ -0.29
SMIM11A-203ENST00000399299 DNASE1P24855 282 aa13.27□□□□□ -0.29
SMIM11A-203ENST00000399299 APOBEC1P41238 236 aaKnown RBP13.27□□□□□ -0.29
SMIM11A-203ENST00000399299 POLR2JP52435 117 aaKnown RBP13.27□□□□□ -0.29
SMIM11A-203ENST00000399299 MVDP53602 400 aa13.27□□□□□ -0.29
SMIM11A-203ENST00000399299 PLAURQ03405 335 aa13.27□□□□□ -0.29
SMIM11A-203ENST00000399299 MERTKQ12866 999 aa13.27□□□□□ -0.29
SMIM11A-203ENST00000399299 COX20Q5RI15 118 aa13.27□□□□□ -0.29
SMIM11A-203ENST00000399299 BEND4Q6ZU67 534 aa13.27□□□□□ -0.29
SMIM11A-203ENST00000399299 PLEKHM3Q6ZWE6 761 aa13.27□□□□□ -0.29
SMIM11A-203ENST00000399299 FCRLAQ7L513 359 aa13.27□□□□□ -0.29
SMIM11A-203ENST00000399299 STK32CQ86UX6 486 aa13.27□□□□□ -0.29
SMIM11A-203ENST00000399299 ANKFN1Q8N957 763 aa13.27□□□□□ -0.29
SMIM11A-203ENST00000399299 OR9I1Q8NGQ6 314 aa13.27□□□□□ -0.29
SMIM11A-203ENST00000399299 ABHD3Q8WU67 409 aa13.27□□□□□ -0.29
SMIM11A-203ENST00000399299 ROBO4Q8WZ75 1007 aa13.27□□□□□ -0.29
SMIM11A-203ENST00000399299 MBD6Q96DN6 1003 aa13.27□□□□□ -0.29
SMIM11A-203ENST00000399299 ITCHQ96J02 903 aa13.27□□□□□ -0.29
SMIM11A-203ENST00000399299 OR10A4Q9H209 315 aa13.27□□□□□ -0.29
SMIM11A-203ENST00000399299 MTHFD2LQ9H903 347 aaPredicted RBP13.27□□□□□ -0.29
SMIM11A-203ENST00000399299 VIPAS39Q9H9C1 493 aa13.27□□□□□ -0.29
SMIM11A-203ENST00000399299 SLCO1B3Q9NPD5 702 aa13.27□□□□□ -0.29
SMIM11A-203ENST00000399299 TCF7L2Q9NQB0 619 aa13.27□□□□□ -0.29
SMIM11A-203ENST00000399299 SLC6A13Q9NSD5 602 aa13.27□□□□□ -0.29
SMIM11A-203ENST00000399299 CCM2LQ9NUG4 571 aaPredicted RBP13.27□□□□□ -0.29
SMIM11A-203ENST00000399299 KLHL28Q9NXS3 571 aa13.27□□□□□ -0.29
SMIM11A-203ENST00000399299 KLHL13Q9P2N7 655 aa13.27□□□□□ -0.29
SMIM11A-203ENST00000399299 SPIN1Q9Y657 262 aaPredicted RBP13.27□□□□□ -0.29
SMIM11A-203ENST00000399299 FAM234BA2RU67 622 aa13.26□□□□□ -0.29
SMIM11A-203ENST00000399299 HMGB1P1B2RPK0 211 aaPredicted RBP13.26□□□□□ -0.29
SMIM11A-203ENST00000399299 POLR3GO15318 223 aaPredicted RBP13.26□□□□□ -0.29
SMIM11A-203ENST00000399299 BCAS1O75363 584 aaPredicted RBP13.26□□□□□ -0.29
SMIM11A-203ENST00000399299 PRKD3O94806 890 aa13.26□□□□□ -0.29
SMIM11A-203ENST00000399299 RAF1P04049 648 aa13.26□□□□□ -0.29
SMIM11A-203ENST00000399299 PPP3CBP16298 524 aa13.26□□□□□ -0.29
SMIM11A-203ENST00000399299 FKBP2P26885 142 aaKnown RBP13.26□□□□□ -0.29
SMIM11A-203ENST00000399299 GNA13Q14344 377 aa13.26□□□□□ -0.29
SMIM11A-203ENST00000399299 SYT14P1Q58G82 188 aa13.26□□□□□ -0.29
SMIM11A-203ENST00000399299 TMEM201Q5SNT2 666 aa13.26□□□□□ -0.29
SMIM11A-203ENST00000399299 DNAJC14Q6Y2X3 702 aaPredicted RBP13.26□□□□□ -0.29
SMIM11A-203ENST00000399299 HDXQ7Z353 690 aa13.26□□□□□ -0.29
SMIM11A-203ENST00000399299 GRINAQ7Z429 371 aa13.26□□□□□ -0.29
SMIM11A-203ENST00000399299 ARFGAP2Q8N6H7 521 aa13.26□□□□□ -0.29
SMIM11A-203ENST00000399299 ATP6V1C2Q8NEY4 427 aa13.26□□□□□ -0.29
SMIM11A-203ENST00000399299 PNPT1Q8TCS8 783 aaKnown RBP13.26□□□□□ -0.29
SMIM11A-203ENST00000399299 WDR60Q8WVS4 1066 aa13.26□□□□□ -0.29
SMIM11A-203ENST00000399299 ALPK1Q96QP1 1244 aa13.26□□□□□ -0.29
SMIM11A-203ENST00000399299 CCDC28BQ9BUN5 200 aa13.26□□□□□ -0.29
SMIM11A-203ENST00000399299 CCDC106Q9BWC9 280 aa13.26□□□□□ -0.29
SMIM11A-203ENST00000399299 QRSL1Q9H0R6 528 aaKnown RBP13.26□□□□□ -0.29
SMIM11A-203ENST00000399299 TPT1P8Q9HAU6 139 aa13.26□□□□□ -0.29
SMIM11A-203ENST00000399299 BCO1Q9HAY6 547 aa13.26□□□□□ -0.29
SMIM11A-203ENST00000399299 ARGLU1Q9NWB6 273 aaPredicted RBP13.26□□□□□ -0.29
SMIM11A-203ENST00000399299 THUMPD1Q9NXG2 353 aaKnown RBP13.26□□□□□ -0.29
SMIM11A-203ENST00000399299 CALML5Q9NZT1 146 aa13.26□□□□□ -0.29
SMIM11A-203ENST00000399299 KLHL9Q9P2J3 617 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms