RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 RANBP3LQ86VV4 465 aaPredicted RBP13.93□□□□□ -0.18
COL25A1-201ENST00000399126 P3H2Q8IVL5 708 aa13.93□□□□□ -0.18
COL25A1-201ENST00000399126 C9orf40Q8IXQ3 194 aa13.93□□□□□ -0.18
COL25A1-201ENST00000399126 ISOC1Q96CN7 298 aa13.93□□□□□ -0.18
COL25A1-201ENST00000399126 CMTM3Q96MX0 182 aa13.93□□□□□ -0.18
COL25A1-201ENST00000399126 POLE3Q9NRF9 147 aa13.93□□□□□ -0.18
COL25A1-201ENST00000399126 MALT1Q9UDY8 824 aa13.93□□□□□ -0.18
COL25A1-201ENST00000399126 PCDHGA10Q9Y5H3 936 aa13.93□□□□□ -0.18
COL25A1-201ENST00000399126 EP300Q09472 2414 aaPredicted RBP13.93□□□□□ -0.18
COL25A1-201ENST00000399126 MT-ND2P03891 347 aa13.93□□□□□ -0.18
COL25A1-201ENST00000399126 ZGLP1P0C6A0 271 aa13.93□□□□□ -0.18
COL25A1-201ENST00000399126 DRD5P21918 477 aa13.93□□□□□ -0.18
COL25A1-201ENST00000399126 ALDH6A1Q02252 535 aaKnown RBP13.93□□□□□ -0.18
COL25A1-201ENST00000399126 EMX1Q04741 257 aaPredicted RBP13.93□□□□□ -0.18
COL25A1-201ENST00000399126 C19orf57Q0VDD7 668 aa13.93□□□□□ -0.18
COL25A1-201ENST00000399126 ITGADQ13349 1161 aa13.93□□□□□ -0.18
COL25A1-201ENST00000399126 ZBED5Q49AG3 693 aa13.93□□□□□ -0.18
COL25A1-201ENST00000399126 YOD1Q5VVQ6 348 aaPredicted RBP13.93□□□□□ -0.18
COL25A1-201ENST00000399126 OR8D4Q8NGM9 314 aa13.93□□□□□ -0.18
COL25A1-201ENST00000399126 PFN4Q8NHR9 129 aa13.93□□□□□ -0.18
COL25A1-201ENST00000399126 SLC22A8Q8TCC7 542 aa13.93□□□□□ -0.18
COL25A1-201ENST00000399126 ACOT11Q8WXI4 607 aaPredicted RBP13.93□□□□□ -0.18
COL25A1-201ENST00000399126 NEK6Q9HC98 313 aa13.93□□□□□ -0.18
COL25A1-201ENST00000399126 PRODH2Q9UF12 536 aa13.93□□□□□ -0.18
COL25A1-201ENST00000399126 IL20RAQ9UHF4 553 aa13.93□□□□□ -0.18
COL25A1-201ENST00000399126 FAM86C2PA6NEL3 165 aa13.92□□□□□ -0.18
COL25A1-201ENST00000399126 EFCAB7A8K855 629 aa13.92□□□□□ -0.18
COL25A1-201ENST00000399126 NTN3O00634 580 aaPredicted RBP13.92□□□□□ -0.18
COL25A1-201ENST00000399126 CDC42EP2O14613 210 aa13.92□□□□□ -0.18
COL25A1-201ENST00000399126 CCL4P13236 92 aa13.92□□□□□ -0.18
COL25A1-201ENST00000399126 ZNF28P17035 718 aa13.92□□□□□ -0.18
COL25A1-201ENST00000399126 C21orf33P30042 268 aaPredicted RBP13.92□□□□□ -0.18
COL25A1-201ENST00000399126 PTGS2P35354 604 aa13.92□□□□□ -0.18
COL25A1-201ENST00000399126 CDC42P60953 191 aa13.92□□□□□ -0.18
COL25A1-201ENST00000399126 CXCR4P61073 352 aa13.92□□□□□ -0.18
COL25A1-201ENST00000399126 ZNF528Q3MIS6 628 aa13.92□□□□□ -0.18
COL25A1-201ENST00000399126 ACSM5Q6NUN0 579 aa13.92□□□□□ -0.18
COL25A1-201ENST00000399126 C20orf141Q9NUB4 165 aa13.92□□□□□ -0.18
COL25A1-201ENST00000399126 GPR83Q9NYM4 423 aa13.92□□□□□ -0.18
COL25A1-201ENST00000399126 STMN3Q9NZ72 180 aa13.92□□□□□ -0.18
COL25A1-201ENST00000399126 DMXL1Q9Y485 3027 aa13.92□□□□□ -0.18
COL25A1-201ENST00000399126 PCNX3Q9H6A9 2034 aa13.92□□□□□ -0.18
COL25A1-201ENST00000399126 TRAPPC13A5PLN9 417 aa13.92□□□□□ -0.18
COL25A1-201ENST00000399126 C17orf51A8MQB3 221 aa13.92□□□□□ -0.18
COL25A1-201ENST00000399126 TMX2-CTNND1H3BSU7 103 aa13.92□□□□□ -0.18
COL25A1-201ENST00000399126 J3KRW8 73 aa13.92□□□□□ -0.18
COL25A1-201ENST00000399126 CCRL2O00421 344 aa13.92□□□□□ -0.18
COL25A1-201ENST00000399126 FADS2O95864 444 aaKnown RBP13.92□□□□□ -0.18
COL25A1-201ENST00000399126 ACAA2P42765 397 aaKnown RBP13.92□□□□□ -0.18
COL25A1-201ENST00000399126 BMXP51813 675 aa13.92□□□□□ -0.18
COL25A1-201ENST00000399126 ARHGDIBP52566 201 aa13.92□□□□□ -0.18
COL25A1-201ENST00000399126 GPR107Q5VW38 600 aa13.92□□□□□ -0.18
COL25A1-201ENST00000399126 ZNF385CQ66K41 422 aaPredicted RBP13.92□□□□□ -0.18
COL25A1-201ENST00000399126 IDO2Q6ZQW0 420 aa13.92□□□□□ -0.18
COL25A1-201ENST00000399126 PTCHD4Q6ZW05 846 aa13.92□□□□□ -0.18
COL25A1-201ENST00000399126 RRM2BQ7LG56 351 aa13.92□□□□□ -0.18
COL25A1-201ENST00000399126 PPP1R3BQ86XI6 285 aa13.92□□□□□ -0.18
COL25A1-201ENST00000399126 ADIPOR1Q96A54 375 aa13.92□□□□□ -0.18
COL25A1-201ENST00000399126 C12orf43Q96C57 262 aaKnown RBP13.92□□□□□ -0.18
COL25A1-201ENST00000399126 SCN3BQ9NY72 215 aa13.92□□□□□ -0.18
COL25A1-201ENST00000399126 TPRKBQ9Y3C4 175 aa13.92□□□□□ -0.18
COL25A1-201ENST00000399126 J3QRK9 145 aa13.91□□□□□ -0.18
COL25A1-201ENST00000399126 ADRA2AP08913 450 aa13.91□□□□□ -0.18
COL25A1-201ENST00000399126 ZNF3P17036 446 aa13.91□□□□□ -0.18
COL25A1-201ENST00000399126 RORAP35398 523 aa13.91□□□□□ -0.18
COL25A1-201ENST00000399126 ATP12AP54707 1039 aa13.91□□□□□ -0.18
COL25A1-201ENST00000399126 FGFBP1Q14512 234 aa13.91□□□□□ -0.18
COL25A1-201ENST00000399126 EBPQ15125 230 aaKnown RBP13.91□□□□□ -0.18
COL25A1-201ENST00000399126 ZNF141Q15928 474 aa13.91□□□□□ -0.18
COL25A1-201ENST00000399126 DECR1Q16698 335 aa13.91□□□□□ -0.18
COL25A1-201ENST00000399126 CLEC12AQ5QGZ9 265 aa13.91□□□□□ -0.18
COL25A1-201ENST00000399126 SLX4IPQ5VYV7 408 aa13.91□□□□□ -0.18
COL25A1-201ENST00000399126 GTF2IRD2BQ6EKJ0 949 aa13.91□□□□□ -0.18
COL25A1-201ENST00000399126 FAM122CQ6P4D5 195 aa13.91□□□□□ -0.18
COL25A1-201ENST00000399126 APOOLQ6UXV4 268 aa13.91□□□□□ -0.18
COL25A1-201ENST00000399126 C16orf47Q6ZP98 133 aaPredicted RBP13.91□□□□□ -0.18
COL25A1-201ENST00000399126 GTF2IRD2Q86UP8 949 aa13.91□□□□□ -0.18
COL25A1-201ENST00000399126 CCDC28AQ8IWP9 274 aa13.91□□□□□ -0.18
COL25A1-201ENST00000399126 INTS12Q96CB8 462 aaKnown RBP13.91□□□□□ -0.18
COL25A1-201ENST00000399126 SLC46A1Q96NT5 459 aa13.91□□□□□ -0.18
COL25A1-201ENST00000399126 KLHDC3Q9BQ90 382 aa13.91□□□□□ -0.18
COL25A1-201ENST00000399126 G6PC3Q9BUM1 346 aa13.91□□□□□ -0.18
COL25A1-201ENST00000399126 ATP13A2Q9NQ11 1180 aa13.91□□□□□ -0.18
COL25A1-201ENST00000399126 RXFP3Q9NSD7 469 aa13.91□□□□□ -0.18
COL25A1-201ENST00000399126 ENOPH1Q9UHY7 261 aa13.91□□□□□ -0.18
COL25A1-201ENST00000399126 CDV3Q9UKY7 258 aaKnown RBP13.91□□□□□ -0.18
COL25A1-201ENST00000399126 IDSB3KWA1 339 aa13.91□□□□□ -0.18
COL25A1-201ENST00000399126 OIP5O43482 229 aa13.91□□□□□ -0.18
COL25A1-201ENST00000399126 GINS1Q14691 196 aa13.91□□□□□ -0.18
COL25A1-201ENST00000399126 CCDC157Q569K6 752 aa13.91□□□□□ -0.18
COL25A1-201ENST00000399126 CD300LDQ6UXZ3 194 aa13.91□□□□□ -0.18
COL25A1-201ENST00000399126 MBOAT2Q6ZWT7 520 aa13.91□□□□□ -0.18
COL25A1-201ENST00000399126 DEPDC4Q8N2C3 294 aa13.91□□□□□ -0.18
COL25A1-201ENST00000399126 POGLUT1Q8NBL1 392 aa13.91□□□□□ -0.18
COL25A1-201ENST00000399126 OR13F1Q8NGS4 319 aa13.91□□□□□ -0.18
COL25A1-201ENST00000399126 PIGXQ8TBF5 258 aa13.91□□□□□ -0.18
COL25A1-201ENST00000399126 GGHQ92820 318 aa13.91□□□□□ -0.18
COL25A1-201ENST00000399126 TVP23BQ9NYZ1 205 aa13.91□□□□□ -0.18
COL25A1-201ENST00000399126 DNAJC27Q9NZQ0 273 aa13.91□□□□□ -0.18
COL25A1-201ENST00000399126 GNB5O14775 395 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms