RNA–Protein interactions for RNA: ENST00000398529.7

RAB1A-201, Transcript of RAB1A, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB1A, Length 1,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1A-201ENST00000398529 SPDL1Q96EA4 605 aa12.79□□□□□ -0.36
RAB1A-201ENST00000398529 USB1Q9BQ65 265 aaKnown RBP12.79□□□□□ -0.36
RAB1A-201ENST00000398529 FAIMQ9NVQ4 179 aa12.79□□□□□ -0.36
RAB1A-201ENST00000398529 BTNL2Q9UIR0 455 aa12.79□□□□□ -0.36
RAB1A-201ENST00000398529 LIPT1Q9Y234 373 aa12.79□□□□□ -0.36
RAB1A-201ENST00000398529 CR1P17927 2039 aa12.79□□□□□ -0.36
RAB1A-201ENST00000398529 A0A087WV62 115 aa12.78□□□□□ -0.36
RAB1A-201ENST00000398529 A0A087WZY1 265 aa12.78□□□□□ -0.36
RAB1A-201ENST00000398529 CCDC154A6NI56 674 aa12.78□□□□□ -0.36
RAB1A-201ENST00000398529 CFLARO15519 480 aa12.78□□□□□ -0.36
RAB1A-201ENST00000398529 GMFGO60234 142 aa12.78□□□□□ -0.36
RAB1A-201ENST00000398529 CPSF4O95639 269 aaKnown RBP12.78□□□□□ -0.36
RAB1A-201ENST00000398529 IFI6P09912 130 aa12.78□□□□□ -0.36
RAB1A-201ENST00000398529 PSMB1P20618 241 aaKnown RBP12.78□□□□□ -0.36
RAB1A-201ENST00000398529 IL32P24001 234 aa12.78□□□□□ -0.36
RAB1A-201ENST00000398529 ACVR1BP36896 505 aa12.78□□□□□ -0.36
RAB1A-201ENST00000398529 LRRC74AQ0VAA2 488 aa12.78□□□□□ -0.36
RAB1A-201ENST00000398529 CTU2Q2VPK5 515 aaKnown RBP12.78□□□□□ -0.36
RAB1A-201ENST00000398529 TIGD2Q4W5G0 525 aa12.78□□□□□ -0.36
RAB1A-201ENST00000398529 TMEM107Q6UX40 140 aa12.78□□□□□ -0.36
RAB1A-201ENST00000398529 MARCH3Q86UD3 253 aa12.78□□□□□ -0.36
RAB1A-201ENST00000398529 ANKS4BQ8N8V4 417 aa12.78□□□□□ -0.36
RAB1A-201ENST00000398529 CCDC197Q8NCU1 140 aa12.78□□□□□ -0.36
RAB1A-201ENST00000398529 OR7G2Q8NG99 324 aa12.78□□□□□ -0.36
RAB1A-201ENST00000398529 BCAS4Q8TDM0 211 aa12.78□□□□□ -0.36
RAB1A-201ENST00000398529 HSD17B8Q92506 261 aa12.78□□□□□ -0.36
RAB1A-201ENST00000398529 VPS33AQ96AX1 596 aa12.78□□□□□ -0.36
RAB1A-201ENST00000398529 ELP4Q96EB1 424 aa12.78□□□□□ -0.36
RAB1A-201ENST00000398529 CCDC115Q96NT0 180 aa12.78□□□□□ -0.36
RAB1A-201ENST00000398529 RHNO1Q9BSD3 238 aa12.78□□□□□ -0.36
RAB1A-201ENST00000398529 AMBRA1Q9C0C7 1298 aa12.78□□□□□ -0.36
RAB1A-201ENST00000398529 MYLK2Q9H1R3 596 aa12.78□□□□□ -0.36
RAB1A-201ENST00000398529 SLCO5A1Q9H2Y9 848 aa12.78□□□□□ -0.36
RAB1A-201ENST00000398529 C12orf49Q9H741 205 aa12.78□□□□□ -0.36
RAB1A-201ENST00000398529 SLC52A3Q9NQ40 469 aa12.78□□□□□ -0.36
RAB1A-201ENST00000398529 SIRT3Q9NTG7 399 aaPredicted RBP12.78□□□□□ -0.36
RAB1A-201ENST00000398529 CDC42EP3Q9UKI2 254 aa12.78□□□□□ -0.36
RAB1A-201ENST00000398529 PCDHGB4Q9UN71 923 aa12.78□□□□□ -0.36
RAB1A-201ENST00000398529 CAPN7Q9Y6W3 813 aa12.78□□□□□ -0.36
RAB1A-201ENST00000398529 C17orf51A8MQB3 221 aa12.77□□□□□ -0.37
RAB1A-201ENST00000398529 OVOL3O00110 214 aa12.77□□□□□ -0.37
RAB1A-201ENST00000398529 NDUFAB1O14561 156 aa12.77□□□□□ -0.37
RAB1A-201ENST00000398529 SLC22A2O15244 555 aa12.77□□□□□ -0.37
RAB1A-201ENST00000398529 PHF1O43189 567 aaPredicted RBP12.77□□□□□ -0.37
RAB1A-201ENST00000398529 KCNH1O95259 989 aa12.77□□□□□ -0.37
RAB1A-201ENST00000398529 IL33O95760 270 aa12.77□□□□□ -0.37
RAB1A-201ENST00000398529 ZNF17P17021 662 aa12.77□□□□□ -0.37
RAB1A-201ENST00000398529 CDKN1AP38936 164 aa12.77□□□□□ -0.37
RAB1A-201ENST00000398529 SLC6A8P48029 635 aa12.77□□□□□ -0.37
RAB1A-201ENST00000398529 ZNF41P51814 821 aaPredicted RBP12.77□□□□□ -0.37
RAB1A-201ENST00000398529 HBA1P69905 142 aa12.77□□□□□ -0.37
RAB1A-201ENST00000398529 PSG6Q00889 435 aa12.77□□□□□ -0.37
RAB1A-201ENST00000398529 FAPQ12884 760 aa12.77□□□□□ -0.37
RAB1A-201ENST00000398529 TMEM201Q5SNT2 666 aa12.77□□□□□ -0.37
RAB1A-201ENST00000398529 OR4A15Q8NGL6 344 aa12.77□□□□□ -0.37
RAB1A-201ENST00000398529 OR10D3Q8NH80 312 aa12.77□□□□□ -0.37
RAB1A-201ENST00000398529 PSMA8Q8TAA3 256 aa12.77□□□□□ -0.37
RAB1A-201ENST00000398529 TSPEARQ8WU66 669 aa12.77□□□□□ -0.37
RAB1A-201ENST00000398529 S100PBPQ96BU1 408 aa12.77□□□□□ -0.37
RAB1A-201ENST00000398529 CCDC106Q9BWC9 280 aa12.77□□□□□ -0.37
RAB1A-201ENST00000398529 BEX2Q9BXY8 128 aa12.77□□□□□ -0.37
RAB1A-201ENST00000398529 CXorf36Q9H7Y0 433 aa12.77□□□□□ -0.37
RAB1A-201ENST00000398529 RMND5AQ9H871 391 aa12.77□□□□□ -0.37
RAB1A-201ENST00000398529 TIGARQ9NQ88 270 aa12.77□□□□□ -0.37
RAB1A-201ENST00000398529 DDX18Q9NVP1 670 aaKnown RBP12.77□□□□□ -0.37
RAB1A-201ENST00000398529 ARMCX1Q9P291 453 aa12.77□□□□□ -0.37
RAB1A-201ENST00000398529 C19orf53Q9UNZ5 99 aaPredicted RBP12.77□□□□□ -0.37
RAB1A-201ENST00000398529 VDAC3Q9Y277 283 aa12.77□□□□□ -0.37
RAB1A-201ENST00000398529 TTC36A6NLP5 189 aa12.76□□□□□ -0.37
RAB1A-201ENST00000398529 B4DXG7 233 aa12.76□□□□□ -0.37
RAB1A-201ENST00000398529 HAX1O00165 279 aa12.76□□□□□ -0.37
RAB1A-201ENST00000398529 DCTN3O75935 186 aa12.76□□□□□ -0.37
RAB1A-201ENST00000398529 ANGPTL1O95841 491 aa12.76□□□□□ -0.37
RAB1A-201ENST00000398529 F12P00748 615 aaPredicted RBP12.76□□□□□ -0.37
RAB1A-201ENST00000398529 FAM157CP0CG43 387 aa12.76□□□□□ -0.37
RAB1A-201ENST00000398529 MAPRE2Q15555 327 aa12.76□□□□□ -0.37
RAB1A-201ENST00000398529 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.76□□□□□ -0.37
RAB1A-201ENST00000398529 VPS26BQ4G0F5 336 aa12.76□□□□□ -0.37
RAB1A-201ENST00000398529 HBMQ6B0K9 141 aa12.76□□□□□ -0.37
RAB1A-201ENST00000398529 SLC2A7Q6PXP3 512 aa12.76□□□□□ -0.37
RAB1A-201ENST00000398529 ESPNLQ6ZVH7 1005 aa12.76□□□□□ -0.37
RAB1A-201ENST00000398529 GGNQ86UU5 652 aa12.76□□□□□ -0.37
RAB1A-201ENST00000398529 OR2L13Q8N349 312 aa12.76□□□□□ -0.37
RAB1A-201ENST00000398529 OR2V1Q8NHB1 315 aa12.76□□□□□ -0.37
RAB1A-201ENST00000398529 SFXN5Q8TD22 340 aa12.76□□□□□ -0.37
RAB1A-201ENST00000398529 ZBTB8AQ96BR9 441 aa12.76□□□□□ -0.37
RAB1A-201ENST00000398529 ITCHQ96J02 903 aa12.76□□□□□ -0.37
RAB1A-201ENST00000398529 PANX1Q96RD7 426 aa12.76□□□□□ -0.37
RAB1A-201ENST00000398529 INPP5KQ9BT40 448 aa12.76□□□□□ -0.37
RAB1A-201ENST00000398529 NTMQ9P121 344 aa12.76□□□□□ -0.37
RAB1A-201ENST00000398529 UPK1AO00322 258 aa12.75□□□□□ -0.37
RAB1A-201ENST00000398529 CXCL13O43927 109 aa12.75□□□□□ -0.37
RAB1A-201ENST00000398529 ADAM11O75078 769 aa12.75□□□□□ -0.37
RAB1A-201ENST00000398529 UTS2O95399 124 aa12.75□□□□□ -0.37
RAB1A-201ENST00000398529 SOD3P08294 240 aa12.75□□□□□ -0.37
RAB1A-201ENST00000398529 HPGDP15428 266 aa12.75□□□□□ -0.37
RAB1A-201ENST00000398529 SOAT1P35610 550 aa12.75□□□□□ -0.37
RAB1A-201ENST00000398529 CDKN2CP42773 168 aa12.75□□□□□ -0.37
RAB1A-201ENST00000398529 CCT3P49368 545 aaKnown RBP12.75□□□□□ -0.37
RAB1A-201ENST00000398529 CARD18P57730 90 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms