RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 CLDN10P78369 228 aa2.56□□□□□ -2
CHD9-202ENST00000398510 TLE4Q04727 773 aa2.56□□□□□ -2
CHD9-202ENST00000398510 PPA1Q15181 289 aa2.56□□□□□ -2
CHD9-202ENST00000398510 TEAD2Q15562 447 aa2.56□□□□□ -2
CHD9-202ENST00000398510 NTRK2Q16620 822 aa2.56□□□□□ -2
CHD9-202ENST00000398510 YIF1BQ5BJH7 314 aa2.56□□□□□ -2
CHD9-202ENST00000398510 NANOGP8Q6NSW7 305 aa2.56□□□□□ -2
CHD9-202ENST00000398510 TMEM108Q6UXF1 575 aa2.56□□□□□ -2
CHD9-202ENST00000398510 Q6ZVU0 165 aa2.56□□□□□ -2
CHD9-202ENST00000398510 GDPD3Q7L5L3 318 aa2.56□□□□□ -2
CHD9-202ENST00000398510 TRIM46Q7Z4K8 759 aa2.56□□□□□ -2
CHD9-202ENST00000398510 TRABD2AQ86V40 505 aa2.56□□□□□ -2
CHD9-202ENST00000398510 TEX26Q8N6G2 289 aa2.56□□□□□ -2
CHD9-202ENST00000398510 TEX19Q8NA77 164 aa2.56□□□□□ -2
CHD9-202ENST00000398510 OR5AK2Q8NH90 309 aa2.56□□□□□ -2
CHD9-202ENST00000398510 HHIPQ96QV1 700 aa2.56□□□□□ -2
CHD9-202ENST00000398510 CPXM1Q96SM3 734 aa2.56□□□□□ -2
CHD9-202ENST00000398510 S1PR3Q99500 378 aa2.56□□□□□ -2
CHD9-202ENST00000398510 ZNF446Q9NWS9 450 aa2.56□□□□□ -2
CHD9-202ENST00000398510 SLAMF8Q9P0V8 285 aa2.56□□□□□ -2
CHD9-202ENST00000398510 SLC7A8Q9UHI5 535 aa2.56□□□□□ -2
CHD9-202ENST00000398510 CNOT11Q9UKZ1 510 aaKnown RBP2.56□□□□□ -2
CHD9-202ENST00000398510 PDE10AQ9Y233 779 aa2.56□□□□□ -2
CHD9-202ENST00000398510 OR6C6A6NF89 314 aa2.56□□□□□ -2
CHD9-202ENST00000398510 UNC119BA6NIH7 251 aa2.56□□□□□ -2
CHD9-202ENST00000398510 HEPACAM2A8MVW5 462 aa2.56□□□□□ -2
CHD9-202ENST00000398510 SCAMP3O14828 347 aaKnown RBP2.56□□□□□ -2
CHD9-202ENST00000398510 NDUFB2O95178 105 aa2.56□□□□□ -2
CHD9-202ENST00000398510 JUNP05412 331 aaKnown RBP2.56□□□□□ -2
CHD9-202ENST00000398510 GP1BAP07359 652 aa2.56□□□□□ -2
CHD9-202ENST00000398510 CD72P21854 359 aa2.56□□□□□ -2
CHD9-202ENST00000398510 FAAP100Q0VG06 881 aa2.56□□□□□ -2
CHD9-202ENST00000398510 EIF2B1Q14232 305 aaKnown RBP2.56□□□□□ -2
CHD9-202ENST00000398510 TIGITQ495A1 244 aa2.56□□□□□ -2
CHD9-202ENST00000398510 B3GNTL1Q67FW5 361 aaPredicted RBP2.56□□□□□ -2
CHD9-202ENST00000398510 OR52W1Q6IF63 320 aa2.56□□□□□ -2
CHD9-202ENST00000398510 LETMD1Q6P1Q0 360 aa2.56□□□□□ -2
CHD9-202ENST00000398510 DEFB132Q7Z7B7 95 aa2.56□□□□□ -2
CHD9-202ENST00000398510 WDR5BQ86VZ2 330 aa2.56□□□□□ -2
CHD9-202ENST00000398510 LSRQ86X29 649 aaPredicted RBP2.56□□□□□ -2
CHD9-202ENST00000398510 ZNF573Q86YE8 665 aa2.56□□□□□ -2
CHD9-202ENST00000398510 C1orf127Q8N9H9 656 aa2.56□□□□□ -2
CHD9-202ENST00000398510 C3orf58Q8NDZ4 430 aa2.56□□□□□ -2
CHD9-202ENST00000398510 OR8J1Q8NGP2 316 aa2.56□□□□□ -2
CHD9-202ENST00000398510 OR56B4Q8NH76 319 aa2.56□□□□□ -2
CHD9-202ENST00000398510 NEIL3Q8TAT5 605 aa2.56□□□□□ -2
CHD9-202ENST00000398510 CMTM2Q8TAZ6 248 aa2.56□□□□□ -2
CHD9-202ENST00000398510 FAM46BQ96A09 425 aa2.56□□□□□ -2
CHD9-202ENST00000398510 SENP5Q96HI0 755 aaPredicted RBP2.56□□□□□ -2
CHD9-202ENST00000398510 PAPOLGQ9BWT3 736 aaKnown RBP2.56□□□□□ -2
CHD9-202ENST00000398510 ITPAQ9BY32 194 aa2.56□□□□□ -2
CHD9-202ENST00000398510 FN3KRPQ9HA64 309 aa2.56□□□□□ -2
CHD9-202ENST00000398510 LIN7BQ9HAP6 207 aa2.56□□□□□ -2
CHD9-202ENST00000398510 FOLH1BQ9HBA9 442 aa2.56□□□□□ -2
CHD9-202ENST00000398510 CLEC4EQ9ULY5 219 aa2.56□□□□□ -2
CHD9-202ENST00000398510 TMA7Q9Y2S6 64 aaKnown RBP2.56□□□□□ -2
CHD9-202ENST00000398510 STYXL1Q9Y6J8 313 aa2.56□□□□□ -2
CHD9-202ENST00000398510 ALPK3Q96L96 1907 aa2.55□□□□□ -2
CHD9-202ENST00000398510 A0A0A6YYH2 397 aa2.55□□□□□ -2
CHD9-202ENST00000398510 A0A1W2PN81 502 aa2.55□□□□□ -2
CHD9-202ENST00000398510 LILRA5A6NI73 299 aa2.55□□□□□ -2
CHD9-202ENST00000398510 A6NJ64 397 aa2.55□□□□□ -2
CHD9-202ENST00000398510 GRXCR1A8MXD5 290 aa2.55□□□□□ -2
CHD9-202ENST00000398510 C9IYK1 514 aa2.55□□□□□ -2
CHD9-202ENST00000398510 H3BQ06 376 aaPredicted RBP2.55□□□□□ -2
CHD9-202ENST00000398510 XRCC2O43543 280 aa2.55□□□□□ -2
CHD9-202ENST00000398510 PRICKLE3O43900 615 aaPredicted RBP2.55□□□□□ -2
CHD9-202ENST00000398510 TIMM8AO60220 97 aaPredicted RBP2.55□□□□□ -2
CHD9-202ENST00000398510 FZD7O75084 574 aa2.55□□□□□ -2
CHD9-202ENST00000398510 ATP6V1G2O95670 118 aa2.55□□□□□ -2
CHD9-202ENST00000398510 TPOP07202 933 aa2.55□□□□□ -2
CHD9-202ENST00000398510 CHRNA7P36544 502 aa2.55□□□□□ -2
CHD9-202ENST00000398510 CPOXP36551 454 aa2.55□□□□□ -2
CHD9-202ENST00000398510 PPP1CCP36873 323 aaKnown RBP2.55□□□□□ -2
CHD9-202ENST00000398510 GINS1Q14691 196 aa2.55□□□□□ -2
CHD9-202ENST00000398510 CTU2Q2VPK5 515 aaKnown RBP2.55□□□□□ -2
CHD9-202ENST00000398510 ALKBH2Q6NS38 261 aa2.55□□□□□ -2
CHD9-202ENST00000398510 ANKRD54Q6NXT1 300 aa2.55□□□□□ -2
CHD9-202ENST00000398510 GRINAQ7Z429 371 aa2.55□□□□□ -2
CHD9-202ENST00000398510 CATSPERDQ86XM0 798 aa2.55□□□□□ -2
CHD9-202ENST00000398510 C15orf54Q8N8G6 183 aa2.55□□□□□ -2
CHD9-202ENST00000398510 C19orf47Q8N9M1 422 aaKnown RBP2.55□□□□□ -2
CHD9-202ENST00000398510 C11orf40Q8WZ69 217 aa2.55□□□□□ -2
CHD9-202ENST00000398510 PIWIL1Q96J94 861 aaKnown RBP2.55□□□□□ -2
CHD9-202ENST00000398510 OR4K3Q96R72 315 aa2.55□□□□□ -2
CHD9-202ENST00000398510 CGREF1Q99674 301 aa2.55□□□□□ -2
CHD9-202ENST00000398510 CCDC106Q9BWC9 280 aa2.55□□□□□ -2
CHD9-202ENST00000398510 DPH1Q9BZG8 443 aa2.55□□□□□ -2
CHD9-202ENST00000398510 GAL3ST2Q9H3Q3 398 aa2.55□□□□□ -2
CHD9-202ENST00000398510 KIR3DX1Q9H7L2 352 aa2.55□□□□□ -2
CHD9-202ENST00000398510 TBC1D17Q9HA65 648 aa2.55□□□□□ -2
CHD9-202ENST00000398510 BARX1Q9HBU1 254 aaPredicted RBP2.55□□□□□ -2
CHD9-202ENST00000398510 DDX4Q9NQI0 724 aaKnown RBP2.55□□□□□ -2
CHD9-202ENST00000398510 HEBP1Q9NRV9 189 aa2.55□□□□□ -2
CHD9-202ENST00000398510 CAMK2AQ9UQM7 478 aa2.55□□□□□ -2
CHD9-202ENST00000398510 TCF20Q9UGU0 1960 aaKnown RBP2.55□□□□□ -2
CHD9-202ENST00000398510 A0A0G2JN53 185 aa2.55□□□□□ -2
CHD9-202ENST00000398510 ZNF840PA6NDX5 716 aa2.55□□□□□ -2
CHD9-202ENST00000398510 COCHO43405 550 aa2.55□□□□□ -2
CHD9-202ENST00000398510 AIFM1O95831 613 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms