RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 CTRB2Q6GPI1 263 aa13.9□□□□□ -0.18
CCDC50-201ENST00000392455 ZBTB8AQ96BR9 441 aa13.9□□□□□ -0.18
CCDC50-201ENST00000392455 ARV1Q9H2C2 271 aa13.9□□□□□ -0.18
CCDC50-201ENST00000392455 WRAP73Q9P2S5 460 aaPredicted RBP13.9□□□□□ -0.18
CCDC50-201ENST00000392455 TRAV18A0A075B6X5 111 aa13.9□□□□□ -0.18
CCDC50-201ENST00000392455 NDUFB2O95178 105 aa13.9□□□□□ -0.18
CCDC50-201ENST00000392455 ICAM2P13598 275 aa13.9□□□□□ -0.18
CCDC50-201ENST00000392455 ACVR1BP36896 505 aa13.9□□□□□ -0.18
CCDC50-201ENST00000392455 MICAQ29983 383 aa13.9□□□□□ -0.18
CCDC50-201ENST00000392455 GPR155Q7Z3F1 870 aa13.9□□□□□ -0.18
CCDC50-201ENST00000392455 CISD2Q8N5K1 135 aaKnown RBP13.9□□□□□ -0.18
CCDC50-201ENST00000392455 EID2Q8N6I1 236 aa13.9□□□□□ -0.18
CCDC50-201ENST00000392455 OR52E2Q8NGJ4 325 aa13.9□□□□□ -0.18
CCDC50-201ENST00000392455 GIMAP1Q8WWP7 306 aa13.9□□□□□ -0.18
CCDC50-201ENST00000392455 FBXW5Q969U6 566 aa13.9□□□□□ -0.18
CCDC50-201ENST00000392455 FAM173AQ9BQD7 235 aa13.9□□□□□ -0.18
CCDC50-201ENST00000392455 KLK4Q9Y5K2 254 aa13.9□□□□□ -0.18
CCDC50-201ENST00000392455 CPNE6O95741 557 aa13.89□□□□□ -0.19
CCDC50-201ENST00000392455 ITGB2P05107 769 aa13.89□□□□□ -0.19
CCDC50-201ENST00000392455 OR12D1P0DN82 309 aa13.89□□□□□ -0.19
CCDC50-201ENST00000392455 MYF6P23409 242 aa13.89□□□□□ -0.19
CCDC50-201ENST00000392455 RNF144AP50876 292 aaPredicted RBP13.89□□□□□ -0.19
CCDC50-201ENST00000392455 PTTG1IPP53801 180 aa13.89□□□□□ -0.19
CCDC50-201ENST00000392455 LTB4RQ15722 352 aa13.89□□□□□ -0.19
CCDC50-201ENST00000392455 CARD17Q5XLA6 110 aa13.89□□□□□ -0.19
CCDC50-201ENST00000392455 SIGLECL1Q8N7X8 197 aa13.89□□□□□ -0.19
CCDC50-201ENST00000392455 OR5W2Q8NH69 310 aa13.89□□□□□ -0.19
CCDC50-201ENST00000392455 TANKQ92844 425 aa13.89□□□□□ -0.19
CCDC50-201ENST00000392455 BCO2Q9BYV7 579 aa13.89□□□□□ -0.19
CCDC50-201ENST00000392455 OR51B5Q9H339 312 aa13.89□□□□□ -0.19
CCDC50-201ENST00000392455 CDC123O75794 336 aaPredicted RBP13.89□□□□□ -0.19
CCDC50-201ENST00000392455 FOXN2P32314 431 aa13.89□□□□□ -0.19
CCDC50-201ENST00000392455 ETV5P41161 510 aa13.89□□□□□ -0.19
CCDC50-201ENST00000392455 KEAP1Q14145 624 aa13.89□□□□□ -0.19
CCDC50-201ENST00000392455 MEX3BQ6ZN04 569 aaKnown RBP13.89□□□□□ -0.19
CCDC50-201ENST00000392455 B4GAT1O43505 415 aa13.89□□□□□ -0.19
CCDC50-201ENST00000392455 G6PDP11413 515 aa13.89□□□□□ -0.19
CCDC50-201ENST00000392455 GRM7Q14831 915 aa13.89□□□□□ -0.19
CCDC50-201ENST00000392455 ASB13Q8WXK3 278 aa13.89□□□□□ -0.19
CCDC50-201ENST00000392455 TOMM40LQ969M1 308 aa13.89□□□□□ -0.19
CCDC50-201ENST00000392455 MS4A4EQ96PG1 132 aa13.89□□□□□ -0.19
CCDC50-201ENST00000392455 METTL15A6NJ78 407 aa13.89□□□□□ -0.19
CCDC50-201ENST00000392455 FAM159BA6NKW6 160 aa13.89□□□□□ -0.19
CCDC50-201ENST00000392455 FGF18O76093 207 aa13.89□□□□□ -0.19
CCDC50-201ENST00000392455 ACPPP15309 386 aa13.89□□□□□ -0.19
CCDC50-201ENST00000392455 ENPP1P22413 925 aa13.89□□□□□ -0.19
CCDC50-201ENST00000392455 STC1P52823 247 aa13.89□□□□□ -0.19
CCDC50-201ENST00000392455 OR56B1Q8NGI3 324 aa13.89□□□□□ -0.19
CCDC50-201ENST00000392455 TMEM59Q9BXS4 323 aa13.89□□□□□ -0.19
CCDC50-201ENST00000392455 PCDHA9Q9Y5H5 950 aa13.89□□□□□ -0.19
CCDC50-201ENST00000392455 MPC1LP0DKB6 136 aa13.89□□□□□ -0.19
CCDC50-201ENST00000392455 ZNF728P0DKX0 622 aa13.89□□□□□ -0.19
CCDC50-201ENST00000392455 AADACP22760 399 aa13.89□□□□□ -0.19
CCDC50-201ENST00000392455 TIGITQ495A1 244 aa13.89□□□□□ -0.19
CCDC50-201ENST00000392455 CPNE8Q86YQ8 564 aa13.89□□□□□ -0.19
CCDC50-201ENST00000392455 DMBX1Q8NFW5 382 aa13.89□□□□□ -0.19
CCDC50-201ENST00000392455 FAM46AQ96IP4 442 aaKnown RBP13.89□□□□□ -0.19
CCDC50-201ENST00000392455 RHCGQ9UBD6 479 aa13.89□□□□□ -0.19
CCDC50-201ENST00000392455 A0A087WZY1 265 aa13.89□□□□□ -0.19
CCDC50-201ENST00000392455 MAN2B1O00754 1011 aa13.89□□□□□ -0.19
CCDC50-201ENST00000392455 PLRG1O43660 514 aaKnown RBP13.89□□□□□ -0.19
CCDC50-201ENST00000392455 SUSD5O60279 629 aa13.89□□□□□ -0.19
CCDC50-201ENST00000392455 PFKMP08237 780 aa13.89□□□□□ -0.19
CCDC50-201ENST00000392455 LCN6P62502 163 aa13.89□□□□□ -0.19
CCDC50-201ENST00000392455 OR6C4Q8NGE1 309 aa13.89□□□□□ -0.19
CCDC50-201ENST00000392455 SAMD8Q96LT4 415 aa13.89□□□□□ -0.19
CCDC50-201ENST00000392455 KCNA7Q96RP8 456 aa13.89□□□□□ -0.19
CCDC50-201ENST00000392455 ARPC5LQ9BPX5 153 aa13.89□□□□□ -0.19
CCDC50-201ENST00000392455 HRASLSQ9HDD0 168 aa13.89□□□□□ -0.19
CCDC50-201ENST00000392455 AJAP1Q9UKB5 411 aaPredicted RBP13.89□□□□□ -0.19
CCDC50-201ENST00000392455 CAMTA1Q9Y6Y1 1673 aa13.89□□□□□ -0.19
CCDC50-201ENST00000392455 POLR2CP19387 275 aaPredicted RBP13.89□□□□□ -0.19
CCDC50-201ENST00000392455 NAA10P41227 235 aaPredicted RBP13.89□□□□□ -0.19
CCDC50-201ENST00000392455 SLC1A3P43003 542 aa13.89□□□□□ -0.19
CCDC50-201ENST00000392455 PPP1R8Q12972 351 aaKnown RBP13.89□□□□□ -0.19
CCDC50-201ENST00000392455 MS4A13Q5J8X5 152 aa13.89□□□□□ -0.19
CCDC50-201ENST00000392455 C22orf39Q6P5X5 142 aa13.89□□□□□ -0.19
CCDC50-201ENST00000392455 Q6ZRG5 221 aa13.89□□□□□ -0.19
CCDC50-201ENST00000392455 HRASLS2Q9NWW9 162 aa13.89□□□□□ -0.19
CCDC50-201ENST00000392455 SMIM30A4D0T7 59 aa13.88□□□□□ -0.19
CCDC50-201ENST00000392455 MRPL19P49406 292 aaKnown RBP13.88□□□□□ -0.19
CCDC50-201ENST00000392455 DCAF12L1Q5VU92 463 aa13.88□□□□□ -0.19
CCDC50-201ENST00000392455 OR10K2Q6IF99 312 aa13.88□□□□□ -0.19
CCDC50-201ENST00000392455 RNF39Q9H2S5 420 aa13.88□□□□□ -0.19
CCDC50-201ENST00000392455 SCN9AQ15858 1988 aa13.88□□□□□ -0.19
CCDC50-201ENST00000392455 A8MV72 311 aaPredicted RBP13.88□□□□□ -0.19
CCDC50-201ENST00000392455 CFHP08603 1231 aa13.88□□□□□ -0.19
CCDC50-201ENST00000392455 TAS2R45P59539 299 aa13.88□□□□□ -0.19
CCDC50-201ENST00000392455 RAB40BQ12829 278 aa13.88□□□□□ -0.19
CCDC50-201ENST00000392455 DNAJA3Q96EY1 480 aa13.88□□□□□ -0.19
CCDC50-201ENST00000392455 SIX2Q9NPC8 291 aa13.88□□□□□ -0.19
CCDC50-201ENST00000392455 AHSGP02765 367 aa13.88□□□□□ -0.19
CCDC50-201ENST00000392455 SCGB1C2P0DMR2 95 aa13.88□□□□□ -0.19
CCDC50-201ENST00000392455 AMTP48728 403 aa13.88□□□□□ -0.19
CCDC50-201ENST00000392455 TEKQ02763 1124 aa13.88□□□□□ -0.19
CCDC50-201ENST00000392455 LEFTY2O00292 366 aa13.88□□□□□ -0.19
CCDC50-201ENST00000392455 NANOGP8Q6NSW7 305 aa13.88□□□□□ -0.19
CCDC50-201ENST00000392455 CATSPERDQ86XM0 798 aa13.88□□□□□ -0.19
CCDC50-201ENST00000392455 ZNF486Q96H40 463 aaPredicted RBP13.88□□□□□ -0.19
CCDC50-201ENST00000392455 NANOGQ9H9S0 305 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms