RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 RAB3DO95716 219 aa13.32□□□□□ -0.28
RTF1-201ENST00000389629 ZDHHC11BP0C7U3 371 aa13.32□□□□□ -0.28
RTF1-201ENST00000389629 ACRP10323 421 aa13.32□□□□□ -0.28
RTF1-201ENST00000389629 UGT2B7P16662 529 aa13.32□□□□□ -0.28
RTF1-201ENST00000389629 CERS1P27544 350 aa13.32□□□□□ -0.28
RTF1-201ENST00000389629 UBE2MP61081 183 aaKnown RBP13.32□□□□□ -0.28
RTF1-201ENST00000389629 RAB33AQ14088 237 aa13.32□□□□□ -0.28
RTF1-201ENST00000389629 CCNJQ5T5M9 372 aa13.32□□□□□ -0.28
RTF1-201ENST00000389629 KIAA1211LQ6NV74 962 aa13.32□□□□□ -0.28
RTF1-201ENST00000389629 FAAP20Q6NZ36 180 aa13.32□□□□□ -0.28
RTF1-201ENST00000389629 LCTLQ6UWM7 567 aa13.32□□□□□ -0.28
RTF1-201ENST00000389629 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.32□□□□□ -0.28
RTF1-201ENST00000389629 FAM83HQ6ZRV2 1179 aaPredicted RBP13.32□□□□□ -0.28
RTF1-201ENST00000389629 OR6V1Q8N148 313 aa13.32□□□□□ -0.28
RTF1-201ENST00000389629 SVBPQ8N300 66 aa13.32□□□□□ -0.28
RTF1-201ENST00000389629 TAS2R8Q9NYW2 309 aa13.32□□□□□ -0.28
RTF1-201ENST00000389629 V9GYH0 126 aa13.32□□□□□ -0.28
RTF1-201ENST00000389629 VEGFDO43915 354 aa13.31□□□□□ -0.28
RTF1-201ENST00000389629 PRKRAO75569 313 aaKnown RBP13.31□□□□□ -0.28
RTF1-201ENST00000389629 UBL4AP11441 157 aa13.31□□□□□ -0.28
RTF1-201ENST00000389629 EIF1AXP47813 144 aaKnown RBP13.31□□□□□ -0.28
RTF1-201ENST00000389629 RAD9AQ99638 391 aa13.31□□□□□ -0.28
RTF1-201ENST00000389629 PELOQ9BRX2 385 aaKnown RBP13.31□□□□□ -0.28
RTF1-201ENST00000389629 TMEM168Q9H0V1 697 aa13.31□□□□□ -0.28
RTF1-201ENST00000389629 WNK3Q9BYP7 1800 aa13.31□□□□□ -0.28
RTF1-201ENST00000389629 COL11A1P12107 1806 aaPredicted RBP13.31□□□□□ -0.28
RTF1-201ENST00000389629 H3BNC9 293 aa13.31□□□□□ -0.28
RTF1-201ENST00000389629 ACSM4P0C7M7 580 aa13.31□□□□□ -0.28
RTF1-201ENST00000389629 CTSEP14091 401 aa13.31□□□□□ -0.28
RTF1-201ENST00000389629 PBX2P40425 430 aa13.31□□□□□ -0.28
RTF1-201ENST00000389629 ACTR1BP42025 376 aa13.31□□□□□ -0.28
RTF1-201ENST00000389629 FRKP42685 505 aaPredicted RBP13.31□□□□□ -0.28
RTF1-201ENST00000389629 ACTR1AP61163 376 aa13.31□□□□□ -0.28
RTF1-201ENST00000389629 ZNF616Q08AN1 781 aa13.31□□□□□ -0.28
RTF1-201ENST00000389629 RNASE10Q5GAN6 216 aaKnown RBP13.31□□□□□ -0.28
RTF1-201ENST00000389629 LAIR1Q6GTX8 287 aa13.31□□□□□ -0.28
RTF1-201ENST00000389629 ARHGAP11AQ6P4F7 1023 aa13.31□□□□□ -0.28
RTF1-201ENST00000389629 TSSK4Q6SA08 328 aa13.31□□□□□ -0.28
RTF1-201ENST00000389629 ZNF322Q6U7Q0 402 aaPredicted RBP13.31□□□□□ -0.28
RTF1-201ENST00000389629 TMEM239Q8WW34 195 aa13.31□□□□□ -0.28
RTF1-201ENST00000389629 BARHL1Q9BZE3 327 aa13.31□□□□□ -0.28
RTF1-201ENST00000389629 IGFLR1Q9H665 355 aa13.31□□□□□ -0.28
RTF1-201ENST00000389629 V9GY05 133 aa13.31□□□□□ -0.28
RTF1-201ENST00000389629 ZNF831Q5JPB2 1677 aa13.31□□□□□ -0.28
RTF1-201ENST00000389629 SCGNO76038 276 aa13.31□□□□□ -0.28
RTF1-201ENST00000389629 F11P03951 625 aa13.31□□□□□ -0.28
RTF1-201ENST00000389629 FOSL2P15408 326 aa13.31□□□□□ -0.28
RTF1-201ENST00000389629 CBR1P16152 277 aa13.31□□□□□ -0.28
RTF1-201ENST00000389629 HMGA1P17096 107 aaKnown RBP13.31□□□□□ -0.28
RTF1-201ENST00000389629 CCKBRP32239 447 aa13.31□□□□□ -0.28
RTF1-201ENST00000389629 POU4F2Q12837 409 aa13.31□□□□□ -0.28
RTF1-201ENST00000389629 RPL13AP3Q6NVV1 102 aa13.31□□□□□ -0.28
RTF1-201ENST00000389629 TMEM88Q6PEY1 159 aa13.31□□□□□ -0.28
RTF1-201ENST00000389629 NRSN1Q8IZ57 195 aa13.31□□□□□ -0.28
RTF1-201ENST00000389629 PXT1Q8NFP0 134 aa13.31□□□□□ -0.28
RTF1-201ENST00000389629 CHAC2Q8WUX2 184 aa13.31□□□□□ -0.28
RTF1-201ENST00000389629 PMM1Q92871 262 aa13.31□□□□□ -0.28
RTF1-201ENST00000389629 GCDHQ92947 438 aaPredicted RBP13.31□□□□□ -0.28
RTF1-201ENST00000389629 PDXPQ96GD0 296 aa13.31□□□□□ -0.28
RTF1-201ENST00000389629 LRIG1Q96JA1 1093 aa13.31□□□□□ -0.28
RTF1-201ENST00000389629 OR14A2Q96R54 314 aa13.31□□□□□ -0.28
RTF1-201ENST00000389629 HRH4Q9H3N8 390 aa13.31□□□□□ -0.28
RTF1-201ENST00000389629 PLEKHA1Q9HB21 404 aa13.31□□□□□ -0.28
RTF1-201ENST00000389629 RPS10P5Q9NQ39 176 aa13.31□□□□□ -0.28
RTF1-201ENST00000389629 RXFP3Q9NSD7 469 aa13.31□□□□□ -0.28
RTF1-201ENST00000389629 GPR171O14626 319 aa13.31□□□□□ -0.28
RTF1-201ENST00000389629 CDC40O60508 579 aaKnown RBP eCLIP13.31□□□□□ -0.28
RTF1-201ENST00000389629 LIM2P55344 173 aa13.31□□□□□ -0.28
RTF1-201ENST00000389629 FXNQ16595 210 aa13.31□□□□□ -0.28
RTF1-201ENST00000389629 CD300LGQ6UXG3 332 aa13.31□□□□□ -0.28
RTF1-201ENST00000389629 LRRC25Q8N386 305 aaPredicted RBP13.31□□□□□ -0.28
RTF1-201ENST00000389629 OR2A12Q8NGT7 310 aa13.31□□□□□ -0.28
RTF1-201ENST00000389629 C1QTNF2Q9BXJ5 285 aa13.31□□□□□ -0.28
RTF1-201ENST00000389629 ACTRT3Q9BYD9 372 aa13.31□□□□□ -0.28
RTF1-201ENST00000389629 A4GALTQ9NPC4 353 aa13.31□□□□□ -0.28
RTF1-201ENST00000389629 GRHPRQ9UBQ7 328 aa13.31□□□□□ -0.28
RTF1-201ENST00000389629 CDHR4A6H8M9 788 aa13.3□□□□□ -0.28
RTF1-201ENST00000389629 SLC2A10O95528 541 aa13.3□□□□□ -0.28
RTF1-201ENST00000389629 B4GALNT1Q00973 533 aa13.3□□□□□ -0.28
RTF1-201ENST00000389629 TLE2Q04725 743 aa13.3□□□□□ -0.28
RTF1-201ENST00000389629 HEPHL1Q6MZM0 1159 aa13.3□□□□□ -0.28
RTF1-201ENST00000389629 HTR3DQ70Z44 454 aa13.3□□□□□ -0.28
RTF1-201ENST00000389629 TMUB2Q71RG4 321 aa13.3□□□□□ -0.28
RTF1-201ENST00000389629 GRASPQ7Z6J2 395 aaPredicted RBP13.3□□□□□ -0.28
RTF1-201ENST00000389629 LIX1LQ8IVB5 337 aa13.3□□□□□ -0.28
RTF1-201ENST00000389629 DCUN1D4Q92564 292 aa13.3□□□□□ -0.28
RTF1-201ENST00000389629 TMEM41AQ96HV5 264 aa13.3□□□□□ -0.28
RTF1-201ENST00000389629 MTHFD2LQ9H903 347 aaPredicted RBP13.3□□□□□ -0.28
RTF1-201ENST00000389629 IER3IP1Q9Y5U9 82 aa13.3□□□□□ -0.28
RTF1-201ENST00000389629 TGM6O95932 706 aa13.3□□□□□ -0.28
RTF1-201ENST00000389629 ZNF79Q15937 498 aa13.3□□□□□ -0.28
RTF1-201ENST00000389629 ERN2Q76MJ5 926 aaKnown RBP13.3□□□□□ -0.28
RTF1-201ENST00000389629 SLC35F2Q8IXU6 374 aa13.3□□□□□ -0.28
RTF1-201ENST00000389629 SCARB1Q8WTV0 552 aa13.3□□□□□ -0.28
RTF1-201ENST00000389629 LINC01599Q8WXQ3 324 aa13.3□□□□□ -0.28
RTF1-201ENST00000389629 C12orf57Q99622 126 aa13.3□□□□□ -0.28
RTF1-201ENST00000389629 ATF6BQ99941 703 aa13.3□□□□□ -0.28
RTF1-201ENST00000389629 PELI2Q9HAT8 420 aa13.3□□□□□ -0.28
RTF1-201ENST00000389629 C11orf98E9PRG8 122 aa13.3□□□□□ -0.28
RTF1-201ENST00000389629 CD22P20273 847 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms