RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 BRCA1P38398 1863 aaKnown RBP12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 ZNF208O43345 1280 aa12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 IGHEP01854 428 aa12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 GADD45AP24522 165 aa12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 C17orf67Q0P5P2 114 aa12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 FAM53BQ14153 422 aa12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 FBXO42Q6P3S6 717 aa12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 TMPRSS12Q86WS5 348 aa12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 ZNF227Q86WZ6 799 aa12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 GPBAR1Q8TDU6 330 aa12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 TNFRSF13CQ96RJ3 184 aa12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 PAK1IP1Q9NWT1 392 aaPredicted RBP12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 MCTS1Q9ULC4 181 aaKnown RBP12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 ZNF337Q9Y3M9 751 aa12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 LOXL2Q9Y4K0 774 aa12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 MEN1O00255 615 aa12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 HMGN4O00479 90 aa12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 NUDT21O43809 227 aaKnown RBP12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 HOXB3P14651 431 aaPredicted RBP12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 C21orf33P30042 268 aaPredicted RBP12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 HTR3AP46098 478 aa12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 CCL11P51671 97 aa12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 NXPH1P58417 271 aa12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 PITPNAQ00169 270 aa12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 TSPAN31Q12999 210 aa12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 PGGHGQ32M88 737 aa12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 C6orf15Q6UXA7 325 aaPredicted RBP12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 RASSF6Q6ZTQ3 369 aa12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 GALNT15Q8N3T1 639 aa12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 TMEM151AQ8N4L1 468 aa12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 TMEM102Q8N9M5 508 aaPredicted RBP12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 SLC2A12Q8TD20 617 aa12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 TM9SF4Q92544 642 aa12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 TMIGD2Q96BF3 282 aa12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 AMBRA1Q9C0C7 1298 aa12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 CDCP1Q9H5V8 836 aa12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 ATP13A2Q9NQ11 1180 aa12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 MED11Q9P086 117 aa12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 LOC285556D6RIA3 1793 aa12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 DNAJC13O75165 2243 aa12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 HTR3EA5X5Y0 456 aa12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 FOXD2O60548 495 aaPredicted RBP12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 DPP4P27487 766 aa12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 PRKAR1BP31321 381 aa12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 DAPP51397 102 aa12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 SELENOVP59797 346 aa12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 UBE2NP61088 152 aaKnown RBP12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 PPP1CAP62136 330 aa12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 NCS1P62166 190 aa12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 SLC22A10Q63ZE4 541 aa12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 SLC6A19Q695T7 634 aa12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 FER1L6-AS2Q96M78 137 aa12.16□□□□□ -0.46
PTPRN2-202ENST00000389416 SBF1O95248 1867 aa12.15□□□□□ -0.46
PTPRN2-202ENST00000389416 SYT5O00445 386 aa12.15□□□□□ -0.46
PTPRN2-202ENST00000389416 ARHGAP33O14559 1287 aa12.15□□□□□ -0.46
PTPRN2-202ENST00000389416 CBFA2T3O75081 653 aa12.15□□□□□ -0.46
PTPRN2-202ENST00000389416 CRABP1P29762 137 aa12.15□□□□□ -0.46
PTPRN2-202ENST00000389416 GPR3P46089 330 aa12.15□□□□□ -0.46
PTPRN2-202ENST00000389416 GLO1Q04760 184 aa12.15□□□□□ -0.46
PTPRN2-202ENST00000389416 MRPL49Q13405 166 aaKnown RBP12.15□□□□□ -0.46
PTPRN2-202ENST00000389416 OR7G1Q8NGA0 311 aa12.15□□□□□ -0.46
PTPRN2-202ENST00000389416 ZNF420Q8TAQ5 688 aaPredicted RBP12.15□□□□□ -0.46
PTPRN2-202ENST00000389416 KATNB1Q9BVA0 655 aa12.15□□□□□ -0.46
PTPRN2-202ENST00000389416 ALG8Q9BVK2 526 aa12.15□□□□□ -0.46
PTPRN2-202ENST00000389416 POU2F3Q9UKI9 436 aa12.15□□□□□ -0.46
PTPRN2-202ENST00000389416 IGHV5-51A0A0C4DH38 117 aa12.15□□□□□ -0.46
PTPRN2-202ENST00000389416 FAM172BPA6NC97 362 aa12.15□□□□□ -0.46
PTPRN2-202ENST00000389416 SUSD5O60279 629 aa12.15□□□□□ -0.46
PTPRN2-202ENST00000389416 ATE1O95260 518 aa12.15□□□□□ -0.46
PTPRN2-202ENST00000389416 ADH7P40394 386 aa12.15□□□□□ -0.46
PTPRN2-202ENST00000389416 AQP2P41181 271 aa12.15□□□□□ -0.46
PTPRN2-202ENST00000389416 TMBIM6P55061 237 aa12.15□□□□□ -0.46
PTPRN2-202ENST00000389416 GABARAPL2P60520 117 aa12.15□□□□□ -0.46
PTPRN2-202ENST00000389416 TMEM255BQ8WV15 326 aa12.15□□□□□ -0.46
PTPRN2-202ENST00000389416 RADILQ96JH8 1075 aa12.15□□□□□ -0.46
PTPRN2-202ENST00000389416 CHST8Q9H2A9 424 aa12.15□□□□□ -0.46
PTPRN2-202ENST00000389416 SIDT1Q9NXL6 827 aaKnown RBP12.15□□□□□ -0.46
PTPRN2-202ENST00000389416 NPFFR2Q9Y5X5 522 aa12.15□□□□□ -0.46
PTPRN2-202ENST00000389416 OR2A25A4D2G3 310 aa12.15□□□□□ -0.46
PTPRN2-202ENST00000389416 H0YIG0 161 aa12.15□□□□□ -0.46
PTPRN2-202ENST00000389416 PSKH1P11801 424 aa12.15□□□□□ -0.46
PTPRN2-202ENST00000389416 RRADP55042 308 aa12.15□□□□□ -0.46
PTPRN2-202ENST00000389416 CSNK2A1P68400 391 aaPredicted RBP12.15□□□□□ -0.46
PTPRN2-202ENST00000389416 SIGLEC14Q08ET2 396 aa12.15□□□□□ -0.46
PTPRN2-202ENST00000389416 GXYLT1Q4G148 440 aa12.15□□□□□ -0.46
PTPRN2-202ENST00000389416 SAXO2Q658L1 398 aa12.15□□□□□ -0.46
PTPRN2-202ENST00000389416 GLT8D1Q68CQ7 371 aa12.15□□□□□ -0.46
PTPRN2-202ENST00000389416 DHRS13Q6UX07 377 aa12.15□□□□□ -0.46
PTPRN2-202ENST00000389416 C16orf52Q8NHV5 167 aa12.15□□□□□ -0.46
PTPRN2-202ENST00000389416 LHPPQ9H008 270 aa12.15□□□□□ -0.46
PTPRN2-202ENST00000389416 PRDM6Q9NQX0 595 aa12.15□□□□□ -0.46
PTPRN2-202ENST00000389416 SPTBP11277 2137 aa12.15□□□□□ -0.46
PTPRN2-202ENST00000389416 GPR179Q6PRD1 2367 aa12.15□□□□□ -0.47
PTPRN2-202ENST00000389416 RBBP6Q7Z6E9 1792 aaKnown RBP12.15□□□□□ -0.47
PTPRN2-202ENST00000389416 ZNF878C9JN71 531 aa12.14□□□□□ -0.47
PTPRN2-202ENST00000389416 F5H5K5 113 aa12.14□□□□□ -0.47
PTPRN2-202ENST00000389416 UPK1AO00322 258 aa12.14□□□□□ -0.47
PTPRN2-202ENST00000389416 DAP3P51398 398 aaKnown RBP12.14□□□□□ -0.47
PTPRN2-202ENST00000389416 PLAG1Q6DJT9 500 aa12.14□□□□□ -0.47
PTPRN2-202ENST00000389416 LSM14AQ8ND56 463 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms