RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 GP1BAP07359 652 aa13.62□□□□□ -0.23
VPS9D1-201ENST00000389386 ZNF806P0C7X5 589 aa13.62□□□□□ -0.23
VPS9D1-201ENST00000389386 EPXP11678 715 aa13.62□□□□□ -0.23
VPS9D1-201ENST00000389386 TYRP1P17643 537 aa13.62□□□□□ -0.23
VPS9D1-201ENST00000389386 MECP2P51608 486 aaKnown RBP13.62□□□□□ -0.23
VPS9D1-201ENST00000389386 RHOAP61586 193 aa13.62□□□□□ -0.23
VPS9D1-201ENST00000389386 MLLT1Q03111 559 aaPredicted RBP13.62□□□□□ -0.23
VPS9D1-201ENST00000389386 TSPAN31Q12999 210 aa13.62□□□□□ -0.23
VPS9D1-201ENST00000389386 LINC00303Q3SY05 128 aa13.62□□□□□ -0.23
VPS9D1-201ENST00000389386 C7orf61Q8IZ16 206 aa13.62□□□□□ -0.23
VPS9D1-201ENST00000389386 TMEM185AQ8NFB2 350 aa13.62□□□□□ -0.23
VPS9D1-201ENST00000389386 OR52B4Q8NGK2 314 aa13.62□□□□□ -0.23
VPS9D1-201ENST00000389386 GANCQ8TET4 914 aa13.62□□□□□ -0.23
VPS9D1-201ENST00000389386 GCDHQ92947 438 aaPredicted RBP13.62□□□□□ -0.23
VPS9D1-201ENST00000389386 TCEAL3Q969E4 200 aa13.62□□□□□ -0.23
VPS9D1-201ENST00000389386 SLC25A28Q96A46 364 aa13.62□□□□□ -0.23
VPS9D1-201ENST00000389386 PLD4Q96BZ4 506 aa13.62□□□□□ -0.23
VPS9D1-201ENST00000389386 MED8Q96G25 268 aa13.62□□□□□ -0.23
VPS9D1-201ENST00000389386 MS4A4EQ96PG1 132 aa13.62□□□□□ -0.23
VPS9D1-201ENST00000389386 C19orf43Q9BQ61 176 aa13.62□□□□□ -0.23
VPS9D1-201ENST00000389386 MFFQ9GZY8 342 aa13.62□□□□□ -0.23
VPS9D1-201ENST00000389386 TRIM36Q9NQ86 728 aa13.62□□□□□ -0.23
VPS9D1-201ENST00000389386 CNIH4Q9P003 139 aa13.62□□□□□ -0.23
VPS9D1-201ENST00000389386 TMEM218A2RU14 115 aa13.61□□□□□ -0.23
VPS9D1-201ENST00000389386 OR6C68A6NDL8 312 aa13.61□□□□□ -0.23
VPS9D1-201ENST00000389386 PLPP2O43688 288 aa13.61□□□□□ -0.23
VPS9D1-201ENST00000389386 ZNF35P13682 527 aa13.61□□□□□ -0.23
VPS9D1-201ENST00000389386 SLC3A1Q07837 685 aa13.61□□□□□ -0.23
VPS9D1-201ENST00000389386 TRAM1Q15629 374 aa13.61□□□□□ -0.23
VPS9D1-201ENST00000389386 ZNF124Q15973 351 aa13.61□□□□□ -0.23
VPS9D1-201ENST00000389386 MAPK14Q16539 360 aa13.61□□□□□ -0.23
VPS9D1-201ENST00000389386 MANEAQ5SRI9 462 aa13.61□□□□□ -0.23
VPS9D1-201ENST00000389386 AVPI1Q5T686 147 aa13.61□□□□□ -0.23
VPS9D1-201ENST00000389386 LINGO2Q7L985 606 aa13.61□□□□□ -0.23
VPS9D1-201ENST00000389386 CXXC5Q7LFL8 322 aaKnown RBP13.61□□□□□ -0.23
VPS9D1-201ENST00000389386 HS6ST3Q8IZP7 471 aa13.61□□□□□ -0.23
VPS9D1-201ENST00000389386 OR6T1Q8NGN1 323 aa13.61□□□□□ -0.23
VPS9D1-201ENST00000389386 ARL5BQ96KC2 179 aa13.61□□□□□ -0.23
VPS9D1-201ENST00000389386 ADAT1Q9BUB4 502 aaKnown RBP13.61□□□□□ -0.23
VPS9D1-201ENST00000389386 CRB3Q9BUF7 120 aa13.61□□□□□ -0.23
VPS9D1-201ENST00000389386 TDP1Q9NUW8 608 aa13.61□□□□□ -0.23
VPS9D1-201ENST00000389386 TAAR2Q9P1P5 351 aa13.61□□□□□ -0.23
VPS9D1-201ENST00000389386 RPH3AQ9Y2J0 694 aaPredicted RBP13.61□□□□□ -0.23
VPS9D1-201ENST00000389386 ABHD14A-ACY1A0A1B0GW23 586 aa13.61□□□□□ -0.23
VPS9D1-201ENST00000389386 TMEM82A0PJX8 343 aa13.61□□□□□ -0.23
VPS9D1-201ENST00000389386 OR6C74A6NCV1 312 aa13.61□□□□□ -0.23
VPS9D1-201ENST00000389386 HMGN4O00479 90 aa13.61□□□□□ -0.23
VPS9D1-201ENST00000389386 KIAA0355O15063 1070 aa13.61□□□□□ -0.23
VPS9D1-201ENST00000389386 SLC2A10O95528 541 aa13.61□□□□□ -0.23
VPS9D1-201ENST00000389386 EFEMP2O95967 443 aa13.61□□□□□ -0.23
VPS9D1-201ENST00000389386 ATP1B1P05026 303 aa13.61□□□□□ -0.23
VPS9D1-201ENST00000389386 GNSP15586 552 aa13.61□□□□□ -0.23
VPS9D1-201ENST00000389386 RPA2P15927 270 aa13.61□□□□□ -0.23
VPS9D1-201ENST00000389386 PRKAR1BP31321 381 aa13.61□□□□□ -0.23
VPS9D1-201ENST00000389386 NR0B1P51843 470 aaKnown RBP13.61□□□□□ -0.23
VPS9D1-201ENST00000389386 GMFBP60983 142 aa13.61□□□□□ -0.23
VPS9D1-201ENST00000389386 SSTP61278 116 aa13.61□□□□□ -0.23
VPS9D1-201ENST00000389386 IL10RAQ13651 578 aa13.61□□□□□ -0.23
VPS9D1-201ENST00000389386 CSRP2Q16527 193 aa13.61□□□□□ -0.23
VPS9D1-201ENST00000389386 ZNF805Q5CZA5 627 aa13.61□□□□□ -0.23
VPS9D1-201ENST00000389386 C18orf63Q68DL7 685 aa13.61□□□□□ -0.23
VPS9D1-201ENST00000389386 HEPHL1Q6MZM0 1159 aa13.61□□□□□ -0.23
VPS9D1-201ENST00000389386 SYT9Q86SS6 491 aa13.61□□□□□ -0.23
VPS9D1-201ENST00000389386 CMTM4Q8IZR5 234 aa13.61□□□□□ -0.23
VPS9D1-201ENST00000389386 ZFP82Q8N141 532 aa13.61□□□□□ -0.23
VPS9D1-201ENST00000389386 CBARPQ8N350 705 aaPredicted RBP13.61□□□□□ -0.23
VPS9D1-201ENST00000389386 TEX19Q8NA77 164 aa13.61□□□□□ -0.23
VPS9D1-201ENST00000389386 GINS4Q9BRT9 223 aa13.61□□□□□ -0.23
VPS9D1-201ENST00000389386 ENKD1Q9H0I2 346 aa13.61□□□□□ -0.23
VPS9D1-201ENST00000389386 NIT2Q9NQR4 276 aa13.61□□□□□ -0.23
VPS9D1-201ENST00000389386 AKAP7Q9P0M2 348 aaPredicted RBP13.61□□□□□ -0.23
VPS9D1-201ENST00000389386 XIRP2A4UGR9 3374 aa13.6□□□□□ -0.23
VPS9D1-201ENST00000389386 OR2W5A6NFC9 320 aa13.6□□□□□ -0.23
VPS9D1-201ENST00000389386 REV3LO60673 3130 aa13.6□□□□□ -0.23
VPS9D1-201ENST00000389386 NOS3P29474 1203 aa13.6□□□□□ -0.23
VPS9D1-201ENST00000389386 PTGFRP43088 359 aa13.6□□□□□ -0.23
VPS9D1-201ENST00000389386 AP3S2P59780 193 aa13.6□□□□□ -0.23
VPS9D1-201ENST00000389386 PTSQ03393 145 aa13.6□□□□□ -0.23
VPS9D1-201ENST00000389386 ACSM3Q53FZ2 586 aa13.6□□□□□ -0.23
VPS9D1-201ENST00000389386 EYSQ5T1H1 3165 aa13.6□□□□□ -0.23
VPS9D1-201ENST00000389386 AGTRAPQ6RW13 159 aa13.6□□□□□ -0.23
VPS9D1-201ENST00000389386 UQCC3Q6UW78 93 aa13.6□□□□□ -0.23
VPS9D1-201ENST00000389386 RBMS3Q6XE24 437 aaKnown RBP13.6□□□□□ -0.23
VPS9D1-201ENST00000389386 TMEM99Q8N816 258 aa13.6□□□□□ -0.23
VPS9D1-201ENST00000389386 TBX5Q99593 518 aa13.6□□□□□ -0.23
VPS9D1-201ENST00000389386 PRDM9Q9NQV7 894 aa13.6□□□□□ -0.23
VPS9D1-201ENST00000389386 SDHAF3Q9NRP4 125 aa13.6□□□□□ -0.23
VPS9D1-201ENST00000389386 ICKQ9UPZ9 632 aa13.6□□□□□ -0.23
VPS9D1-201ENST00000389386 MEX3AA1L020 520 aaKnown RBP13.6□□□□□ -0.23
VPS9D1-201ENST00000389386 PRAMEF27A3QJZ7 478 aa13.6□□□□□ -0.23
VPS9D1-201ENST00000389386 PMS2P1A4D2B8 440 aa13.6□□□□□ -0.23
VPS9D1-201ENST00000389386 B4GALT2O60909 372 aa13.6□□□□□ -0.23
VPS9D1-201ENST00000389386 PCDH8O95206 1070 aa13.6□□□□□ -0.23
VPS9D1-201ENST00000389386 EPPINO95925 133 aa13.6□□□□□ -0.23
VPS9D1-201ENST00000389386 S100A9P06702 114 aaKnown RBP13.6□□□□□ -0.23
VPS9D1-201ENST00000389386 CKMP06732 381 aa13.6□□□□□ -0.23
VPS9D1-201ENST00000389386 UBBP0CG47 229 aa13.6□□□□□ -0.23
VPS9D1-201ENST00000389386 UBCP0CG48 685 aaKnown RBP13.6□□□□□ -0.23
VPS9D1-201ENST00000389386 GPR143P51810 404 aa13.6□□□□□ -0.23
VPS9D1-201ENST00000389386 RPS27AP62979 156 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms