RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 SERINC1Q9NRX5 453 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 ACSS1Q9NUB1 689 aaPredicted RBP4.6□□□□□ -1.67
PTPRD-203ENST00000381196 PIH1D1Q9NWS0 290 aaKnown RBP4.6□□□□□ -1.67
PTPRD-203ENST00000381196 DCAF16Q9NXF7 216 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 KCNK7Q9Y2U2 307 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 WNT6Q9Y6F9 365 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 A0A1W2PQL4 384 aaPredicted RBP4.6□□□□□ -1.67
PTPRD-203ENST00000381196 E9PI62 339 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 F5H0A9 414 aaPredicted RBP4.6□□□□□ -1.67
PTPRD-203ENST00000381196 OR7A17O14581 309 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 SYNGR4O95473 234 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 SERPINA5P05154 406 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 THBS1P07996 1170 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 PGAM2P15259 253 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 ZNF133P52736 654 aaPredicted RBP4.6□□□□□ -1.67
PTPRD-203ENST00000381196 DOC2AQ14183 400 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 MARCH9Q86YJ5 346 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 SLC24A4Q8NFF2 622 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 LIN37Q96GY3 246 aaPredicted RBP4.6□□□□□ -1.67
PTPRD-203ENST00000381196 BANF2Q9H503 90 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 SGK2Q9HBY8 427 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 BRD7Q9NPI1 651 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 IKZF2Q9UKS7 526 aa4.6□□□□□ -1.67
PTPRD-203ENST00000381196 TISP43B9A030 160 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 TP53I11O14683 189 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 PRKCGP05129 697 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 ANXA4P09525 319 aaPredicted RBP4.59□□□□□ -1.67
PTPRD-203ENST00000381196 LINC00032P0C843 101 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 CCR8P51685 355 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 CDK6Q00534 326 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 SIM2Q14190 667 aaPredicted RBP4.59□□□□□ -1.67
PTPRD-203ENST00000381196 PAN3Q58A45 887 aaKnown RBP4.59□□□□□ -1.67
PTPRD-203ENST00000381196 GDPD4Q6W3E5 623 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 SLC7A5P1Q8MH63 180 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 ANKK1Q8NFD2 765 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 MTFMTQ96DP5 389 aaKnown RBP4.59□□□□□ -1.67
PTPRD-203ENST00000381196 MOGAT1Q96PD6 335 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 CCDC168Q8NDH2 2452 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 TDRD15B5MCY1 1934 aaKnown RBP4.59□□□□□ -1.67
PTPRD-203ENST00000381196 DOCK4Q8N1I0 1966 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.59□□□□□ -1.67
PTPRD-203ENST00000381196 NRP1O14786 923 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 MMP7P09237 267 aaPredicted RBP4.59□□□□□ -1.67
PTPRD-203ENST00000381196 VIPR1P32241 457 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 DCTP40126 519 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 CSNK1DP48730 415 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 FOXK1P85037 733 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 PLA1AQ53H76 456 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 MTFR2Q6P444 385 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 CCDC120Q96HB5 630 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 CXorf58Q96LI9 332 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 PRAP1Q96NZ9 151 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 NEURL2Q9BR09 285 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 WACQ9BTA9 647 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 OR5AC2Q9NZP5 309 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 KCTD3Q9Y597 815 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 DMRT1Q9Y5R6 373 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 CLCA3PQ9Y6N3 262 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 TRDCB7Z8K6 153 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 OR1F1O43749 312 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 TIMP1P01033 207 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 OR5H8P0DN80 308 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 PNMTP11086 282 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 LAMP2P13473 410 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 MPIP34949 423 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 MMP15P51511 669 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 ATP5IP56385 69 aaPredicted RBP4.59□□□□□ -1.67
PTPRD-203ENST00000381196 LCN6P62502 163 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 SLC39A5Q6ZMH5 540 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 B3GNT8Q7Z7M8 397 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 MCATQ8IVS2 390 aaKnown RBP4.59□□□□□ -1.67
PTPRD-203ENST00000381196 SMIM4Q8WVI0 70 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 UBXN10Q96LJ8 280 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 SLC30A3Q99726 388 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 GAR1Q9NY12 217 aaKnown RBP4.59□□□□□ -1.67
PTPRD-203ENST00000381196 RASL12Q9NYN1 266 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 DLGAP4Q9Y2H0 992 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 OPN1LWP04000 364 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 ZNF20P17024 532 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 FHITP49789 147 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 HBG1P69891 147 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 HBG2P69892 147 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 CDK5Q00535 292 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 ECM1Q16610 540 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 PTCRAQ6ISU1 281 aaPredicted RBP4.59□□□□□ -1.67
PTPRD-203ENST00000381196 FAHD1Q6P587 224 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 TMEM65Q6PI78 240 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 TSSK4Q6SA08 328 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 AQP11Q8NBQ7 271 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 TMEM145Q8NBT3 493 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 OR13C3Q8NGS6 347 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 DMRTB1Q96MA1 342 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 CD244Q9BZW8 370 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 ZCCHC4Q9H5U6 513 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 CHRAC1Q9NRG0 131 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 SDHAF3Q9NRP4 125 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 IL36AQ9UHA7 158 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 CD84Q9UIB8 345 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 ZDHHC2Q9UIJ5 367 aa4.59□□□□□ -1.67
PTPRD-203ENST00000381196 NOP16Q9Y3C1 178 aaKnown RBP4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms