RNA–Protein interactions for RNA: ENST00000380996.9

TSSC4-203, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSSC4, Length 1,544 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-203ENST00000380996 SH3PXD2BA1X283 911 aa18.6■□□□□ 0.57
TSSC4-203ENST00000380996 OR10H3O60404 316 aa18.6■□□□□ 0.57
TSSC4-203ENST00000380996 HPRP00739 348 aa18.6■□□□□ 0.57
TSSC4-203ENST00000380996 CD46P15529 392 aa18.6■□□□□ 0.57
TSSC4-203ENST00000380996 FUT4P22083 530 aa18.6■□□□□ 0.57
TSSC4-203ENST00000380996 PRKACGP22612 351 aa18.6■□□□□ 0.57
TSSC4-203ENST00000380996 ZNF41P51814 821 aaPredicted RBP18.6■□□□□ 0.57
TSSC4-203ENST00000380996 TMPRSS3P57727 454 aa18.6■□□□□ 0.57
TSSC4-203ENST00000380996 TBPL2Q6SJ96 375 aa18.6■□□□□ 0.57
TSSC4-203ENST00000380996 IGFL2Q6UWQ7 119 aa18.6■□□□□ 0.57
TSSC4-203ENST00000380996 NKAIN4Q8IVV8 208 aa18.6■□□□□ 0.57
TSSC4-203ENST00000380996 FADS6Q8N9I5 356 aa18.6■□□□□ 0.57
TSSC4-203ENST00000380996 WDSUB1Q8N9V3 476 aa18.6■□□□□ 0.57
TSSC4-203ENST00000380996 ATG16L2Q8NAA4 619 aa18.6■□□□□ 0.57
TSSC4-203ENST00000380996 OR2M3Q8NG83 312 aa18.6■□□□□ 0.57
TSSC4-203ENST00000380996 ST8SIA1Q92185 356 aa18.6■□□□□ 0.57
TSSC4-203ENST00000380996 C3orf49Q96BT1 292 aa18.6■□□□□ 0.57
TSSC4-203ENST00000380996 DTNBP1Q96EV8 351 aa18.6■□□□□ 0.57
TSSC4-203ENST00000380996 PSD2Q9BQI7 771 aa18.6■□□□□ 0.57
TSSC4-203ENST00000380996 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.6■□□□□ 0.57
TSSC4-203ENST00000380996 C12orf10Q9HB07 376 aa18.6■□□□□ 0.57
TSSC4-203ENST00000380996 USE1Q9NZ43 259 aa18.6■□□□□ 0.57
TSSC4-203ENST00000380996 A0A087WUU8 490 aa18.59■□□□□ 0.57
TSSC4-203ENST00000380996 H0YJX3 145 aa18.59■□□□□ 0.57
TSSC4-203ENST00000380996 GNB5O14775 395 aa18.59■□□□□ 0.57
TSSC4-203ENST00000380996 CDC40O60508 579 aaKnown RBP eCLIP18.59■□□□□ 0.57
TSSC4-203ENST00000380996 TRIM3O75382 744 aaPredicted RBP18.59■□□□□ 0.57
TSSC4-203ENST00000380996 LYPD3O95274 346 aa18.59■□□□□ 0.57
TSSC4-203ENST00000380996 RBM34P42696 430 aaKnown RBP18.59■□□□□ 0.57
TSSC4-203ENST00000380996 HTR3AP46098 478 aa18.59■□□□□ 0.57
TSSC4-203ENST00000380996 SEC23BQ15437 767 aa18.59■□□□□ 0.57
TSSC4-203ENST00000380996 TIGD3Q6B0B8 471 aa18.59■□□□□ 0.57
TSSC4-203ENST00000380996 RNF113BQ8IZP6 322 aaKnown RBP18.59■□□□□ 0.57
TSSC4-203ENST00000380996 OR4K5Q8NGD3 323 aa18.59■□□□□ 0.57
TSSC4-203ENST00000380996 MAGEE2Q8TD90 523 aaPredicted RBP18.59■□□□□ 0.57
TSSC4-203ENST00000380996 ZNF597Q96LX8 424 aa18.59■□□□□ 0.57
TSSC4-203ENST00000380996 JSRP1Q96MG2 331 aaPredicted RBP18.59■□□□□ 0.57
TSSC4-203ENST00000380996 C5orf34Q96MH7 638 aa18.59■□□□□ 0.57
TSSC4-203ENST00000380996 BARD1Q99728 777 aaKnown RBP18.59■□□□□ 0.57
TSSC4-203ENST00000380996 FAM173AQ9BQD7 235 aa18.59■□□□□ 0.57
TSSC4-203ENST00000380996 TACO1Q9BSH4 297 aaKnown RBP18.59■□□□□ 0.57
TSSC4-203ENST00000380996 ADAM19Q9H013 955 aa18.59■□□□□ 0.57
TSSC4-203ENST00000380996 ZNF556Q9HAH1 456 aa18.59■□□□□ 0.57
TSSC4-203ENST00000380996 KRCC1Q9NPI7 259 aaPredicted RBP18.59■□□□□ 0.57
TSSC4-203ENST00000380996 PCDHGB6Q9Y5F9 930 aa18.59■□□□□ 0.57
TSSC4-203ENST00000380996 ORC6Q9Y5N6 252 aa18.59■□□□□ 0.57
TSSC4-203ENST00000380996 NCOR2Q9Y618 2525 aa18.59■□□□□ 0.57
TSSC4-203ENST00000380996 CEP295Q9C0D2 2601 aa18.59■□□□□ 0.57
TSSC4-203ENST00000380996 APC2O95996 2303 aa18.59■□□□□ 0.57
TSSC4-203ENST00000380996 ELOA3DA6NLF2 546 aaPredicted RBP18.59■□□□□ 0.57
TSSC4-203ENST00000380996 G3V3Y1 287 aa18.59■□□□□ 0.57
TSSC4-203ENST00000380996 CBR3O75828 277 aa18.59■□□□□ 0.57
TSSC4-203ENST00000380996 ALPLP05186 524 aa18.59■□□□□ 0.57
TSSC4-203ENST00000380996 DNASE1L1P49184 302 aa18.59■□□□□ 0.57
TSSC4-203ENST00000380996 PPP2R2BQ00005 443 aa18.59■□□□□ 0.57
TSSC4-203ENST00000380996 TOMM34Q15785 309 aaPredicted RBP18.59■□□□□ 0.57
TSSC4-203ENST00000380996 ELOA3BQ3SY89 546 aa18.59■□□□□ 0.57
TSSC4-203ENST00000380996 SLC25A25Q6KCM7 469 aa18.59■□□□□ 0.57
TSSC4-203ENST00000380996 UNQ6494/PRO21346Q6UXR6 183 aa18.59■□□□□ 0.57
TSSC4-203ENST00000380996 IZUMO2Q6UXV1 221 aa18.59■□□□□ 0.57
TSSC4-203ENST00000380996 GRINAQ7Z429 371 aa18.59■□□□□ 0.57
TSSC4-203ENST00000380996 MDS2Q8NDY4 140 aa18.59■□□□□ 0.57
TSSC4-203ENST00000380996 ELOA3Q8NG57 546 aa18.59■□□□□ 0.57
TSSC4-203ENST00000380996 TMEM255BQ8WV15 326 aa18.59■□□□□ 0.57
TSSC4-203ENST00000380996 TMEM239Q8WW34 195 aa18.59■□□□□ 0.57
TSSC4-203ENST00000380996 TM9SF4Q92544 642 aa18.59■□□□□ 0.57
TSSC4-203ENST00000380996 FEVQ99581 238 aa18.59■□□□□ 0.57
TSSC4-203ENST00000380996 SMAD5Q99717 465 aaKnown RBP18.59■□□□□ 0.57
TSSC4-203ENST00000380996 PRSS27Q9BQR3 290 aa18.59■□□□□ 0.57
TSSC4-203ENST00000380996 BOKQ9UMX3 212 aaPredicted RBP18.59■□□□□ 0.57
TSSC4-203ENST00000380996 MGAT4BQ9UQ53 548 aa18.59■□□□□ 0.57
TSSC4-203ENST00000380996 KLF13Q9Y2Y9 288 aaPredicted RBP18.59■□□□□ 0.57
TSSC4-203ENST00000380996 PCDHGA9Q9Y5G4 932 aaKnown RBP18.59■□□□□ 0.57
TSSC4-203ENST00000380996 MED13Q9UHV7 2174 aa18.58■□□□□ 0.56
TSSC4-203ENST00000380996 A0A087WUJ7 227 aa18.58■□□□□ 0.56
TSSC4-203ENST00000380996 A0A087WZY1 265 aa18.58■□□□□ 0.56
TSSC4-203ENST00000380996 SP1P08047 785 aa18.58■□□□□ 0.56
TSSC4-203ENST00000380996 TACR3P29371 465 aa18.58■□□□□ 0.56
TSSC4-203ENST00000380996 POLR2HP52434 150 aaKnown RBP18.58■□□□□ 0.56
TSSC4-203ENST00000380996 INPP5JQ15735 1006 aaPredicted RBP18.58■□□□□ 0.56
TSSC4-203ENST00000380996 FAHD1Q6P587 224 aa18.58■□□□□ 0.56
TSSC4-203ENST00000380996 BORAQ6PGQ7 559 aa18.58■□□□□ 0.56
TSSC4-203ENST00000380996 TTC33Q6PID6 262 aaPredicted RBP18.58■□□□□ 0.56
TSSC4-203ENST00000380996 MBOAT2Q6ZWT7 520 aa18.58■□□□□ 0.56
TSSC4-203ENST00000380996 ATG4DQ86TL0 474 aaPredicted RBP18.58■□□□□ 0.56
TSSC4-203ENST00000380996 OR9Q2Q8NGE9 314 aa18.58■□□□□ 0.56
TSSC4-203ENST00000380996 PIGXQ8TBF5 258 aa18.58■□□□□ 0.56
TSSC4-203ENST00000380996 DNAJC9Q8WXX5 260 aa18.58■□□□□ 0.56
TSSC4-203ENST00000380996 C1GALT1C1Q96EU7 318 aa18.58■□□□□ 0.56
TSSC4-203ENST00000380996 KLHDC3Q9BQ90 382 aa18.58■□□□□ 0.56
TSSC4-203ENST00000380996 SMURF2Q9HAU4 748 aa18.58■□□□□ 0.56
TSSC4-203ENST00000380996 MED17Q9NVC6 651 aa18.58■□□□□ 0.56
TSSC4-203ENST00000380996 FBXL2Q9UKC9 423 aa18.58■□□□□ 0.56
TSSC4-203ENST00000380996 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.57■□□□□ 0.56
TSSC4-203ENST00000380996 C1QTNF9BB2RNN3 333 aa18.57■□□□□ 0.56
TSSC4-203ENST00000380996 C1QTNF9P0C862 333 aa18.57■□□□□ 0.56
TSSC4-203ENST00000380996 CXCR1P25024 350 aa18.57■□□□□ 0.56
TSSC4-203ENST00000380996 MST1P26927 711 aa18.57■□□□□ 0.56
TSSC4-203ENST00000380996 DSCR4P56555 118 aaPredicted RBP18.57■□□□□ 0.56
TSSC4-203ENST00000380996 RFX4Q33E94 735 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms