RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 PIGXQ8TBF5 258 aa11.58□□□□□ -0.56
PRPF40B-202ENST00000380281 RFT1Q96AA3 541 aa11.58□□□□□ -0.56
PRPF40B-202ENST00000380281 LRRC46Q96FV0 321 aa11.58□□□□□ -0.56
PRPF40B-202ENST00000380281 PLCL2Q9UPR0 1127 aa11.58□□□□□ -0.56
PRPF40B-202ENST00000380281 CHST2Q9Y4C5 530 aa11.58□□□□□ -0.56
PRPF40B-202ENST00000380281 DENND4CQ5VZ89 1909 aa11.58□□□□□ -0.56
PRPF40B-202ENST00000380281 TRAV27A0A087WT01 109 aa11.58□□□□□ -0.56
PRPF40B-202ENST00000380281 LRIT2A6NDA9 550 aa11.58□□□□□ -0.56
PRPF40B-202ENST00000380281 RNGTTO60942 597 aaKnown RBP11.58□□□□□ -0.56
PRPF40B-202ENST00000380281 HMGN1P05114 100 aa11.58□□□□□ -0.56
PRPF40B-202ENST00000380281 ASGR2P07307 311 aa11.58□□□□□ -0.56
PRPF40B-202ENST00000380281 PIPP12273 146 aaPredicted RBP11.58□□□□□ -0.56
PRPF40B-202ENST00000380281 MYOGP15173 224 aa11.58□□□□□ -0.56
PRPF40B-202ENST00000380281 GRPRP30550 384 aa11.58□□□□□ -0.56
PRPF40B-202ENST00000380281 CDK3Q00526 305 aa11.58□□□□□ -0.56
PRPF40B-202ENST00000380281 LCTLQ6UWM7 567 aa11.58□□□□□ -0.56
PRPF40B-202ENST00000380281 ERN2Q76MJ5 926 aaKnown RBP11.58□□□□□ -0.56
PRPF40B-202ENST00000380281 NR2C2APQ86WQ0 139 aa11.58□□□□□ -0.56
PRPF40B-202ENST00000380281 FRMD1Q8N878 549 aa11.58□□□□□ -0.56
PRPF40B-202ENST00000380281 PFN4Q8NHR9 129 aa11.58□□□□□ -0.56
PRPF40B-202ENST00000380281 WDR89Q96FK6 387 aaPredicted RBP11.58□□□□□ -0.56
PRPF40B-202ENST00000380281 INSL6Q9Y581 213 aa11.58□□□□□ -0.56
PRPF40B-202ENST00000380281 A0A1W2PRQ8 180 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 ANKRD61A6NGH8 418 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 ANXA2P2A6NMY6 339 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 H7C2Y5 167 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 LDB3O75112 727 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 APOC1P02654 83 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 CXCL2P19875 107 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 AK4P27144 223 aaPredicted RBP11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 KHKP50053 298 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 ZNF77Q15935 545 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 TCTE1Q5JU00 501 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 OTPQ5XKR4 325 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 MTSS1LQ765P7 747 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 PRSS45Q7RTY3 260 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 BVESQ8NE79 360 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 C2CD4CQ8TF44 421 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 PRRC1Q96M27 445 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 ZNF559Q9BR84 538 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 BCL2L14Q9BZR8 327 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 ZSCAN32Q9NX65 697 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 TESQ9UGI8 421 aaKnown RBP11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 POMT2Q9UKY4 750 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 RASD1Q9Y272 281 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 MEIKINA0A087WXM9 373 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 DAPL1A0PJW8 107 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 FAM171A2A8MVW0 826 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 LILRB3O75022 631 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 EGFP01133 1207 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 BLVRAP53004 296 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 E2F1Q01094 437 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 MELKQ14680 651 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 MLF2Q15773 248 aaPredicted RBP11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 OCLNQ16625 522 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 C3orf38Q5JPI3 329 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 CDC73Q6P1J9 531 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 FAM111BQ6SJ93 734 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 ZNF704Q6ZNC4 412 aaPredicted RBP11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 IKBIPQ70UQ0 350 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 OR5K2Q8NHB8 316 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 HGDQ93099 445 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 PAWRQ96IZ0 340 aaKnown RBP11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 ORAI3Q9BRQ5 295 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 IFT27Q9BW83 186 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 FAIM2Q9BWQ8 316 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 GPR174Q9BXC1 333 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 CD93Q9NPY3 652 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 C20orf141Q9NUB4 165 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 SCP2D1Q9UJQ7 156 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 TMEM5Q9Y2B1 443 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 STON1Q9Y6Q2 735 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 OR2W5A6NFC9 320 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 LRRC72A6NJI9 287 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 SSX5O60225 188 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 CCL5P13501 91 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 CSNK2A2P19784 350 aaPredicted RBP11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 ATP5A1P25705 553 aaKnown RBP11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 PYCR1P32322 319 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 CDK5Q00535 292 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 C2orf27AQ580R0 203 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 PDSS1Q5T2R2 415 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 SERPINA12Q8IW75 414 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 CCDC36Q8IYA8 594 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 GPR135Q8IZ08 494 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 KLHL36Q8N4N3 616 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 ZNF454Q8N9F8 522 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 SETD7Q8WTS6 366 aaKnown RBP11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 AHCYL2Q96HN2 611 aaKnown RBP11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 RNF32Q9H0A6 362 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 SLC38A1Q9H2H9 487 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 DPAGT1Q9H3H5 408 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 EVA1AQ9H8M9 152 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 KLHL28Q9NXS3 571 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 SLC39A1Q9NY26 324 aa11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 ARHGEF17Q96PE2 2063 aaPredicted RBP11.57□□□□□ -0.56
PRPF40B-202ENST00000380281 TRBV23-1A0A0A0MS06 115 aa11.56□□□□□ -0.56
PRPF40B-202ENST00000380281 A0A1W2PPV9 198 aa11.56□□□□□ -0.56
PRPF40B-202ENST00000380281 FAM25EA8MYX2 175 aa11.56□□□□□ -0.56
PRPF40B-202ENST00000380281 HLA-DPB1P04440 258 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms