RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 INTS14Q96SY0 518 aa13.23□□□□□ -0.29
TRIM13-202ENST00000378182 CD93Q9NPY3 652 aa13.23□□□□□ -0.29
TRIM13-202ENST00000378182 PRDM9Q9NQV7 894 aa13.23□□□□□ -0.29
TRIM13-202ENST00000378182 FAIMQ9NVQ4 179 aa13.23□□□□□ -0.29
TRIM13-202ENST00000378182 OR5H15A6NDH6 313 aa13.22□□□□□ -0.29
TRIM13-202ENST00000378182 OR5H14A6NHG9 310 aa13.22□□□□□ -0.29
TRIM13-202ENST00000378182 OR5H1A6NKK0 313 aa13.22□□□□□ -0.29
TRIM13-202ENST00000378182 UBFD1O14562 309 aaKnown RBP13.22□□□□□ -0.29
TRIM13-202ENST00000378182 GMDSO60547 372 aa13.22□□□□□ -0.29
TRIM13-202ENST00000378182 SCAF4O95104 1147 aaKnown RBP13.22□□□□□ -0.29
TRIM13-202ENST00000378182 ALDH3B2P48448 385 aa13.22□□□□□ -0.29
TRIM13-202ENST00000378182 ERVFC1P60507 584 aa13.22□□□□□ -0.29
TRIM13-202ENST00000378182 AADACL3Q5VUY0 350 aa13.22□□□□□ -0.29
TRIM13-202ENST00000378182 HBMQ6B0K9 141 aa13.22□□□□□ -0.29
TRIM13-202ENST00000378182 RBMS3Q6XE24 437 aaKnown RBP13.22□□□□□ -0.29
TRIM13-202ENST00000378182 NPWQ8N729 165 aa13.22□□□□□ -0.29
TRIM13-202ENST00000378182 C19orf47Q8N9M1 422 aaKnown RBP13.22□□□□□ -0.29
TRIM13-202ENST00000378182 UBAC2Q8NBM4 344 aa13.22□□□□□ -0.29
TRIM13-202ENST00000378182 NETO1Q8TDF5 533 aa13.22□□□□□ -0.29
TRIM13-202ENST00000378182 ZDHHC16Q969W1 377 aa13.22□□□□□ -0.29
TRIM13-202ENST00000378182 TMEM9Q9P0T7 183 aa13.22□□□□□ -0.29
TRIM13-202ENST00000378182 MYOTQ9UBF9 498 aa13.22□□□□□ -0.29
TRIM13-202ENST00000378182 ZNF443Q9Y2A4 671 aaPredicted RBP13.22□□□□□ -0.29
TRIM13-202ENST00000378182 SNED1Q8TER0 1413 aa13.22□□□□□ -0.29
TRIM13-202ENST00000378182 CNR2P34972 360 aa13.22□□□□□ -0.29
TRIM13-202ENST00000378182 MAGEA6P43360 314 aa13.22□□□□□ -0.29
TRIM13-202ENST00000378182 RPL23AP62750 156 aaKnown RBP13.22□□□□□ -0.29
TRIM13-202ENST00000378182 ZNF684Q5T5D7 378 aa13.22□□□□□ -0.29
TRIM13-202ENST00000378182 TMEM64Q6YI46 380 aa13.22□□□□□ -0.29
TRIM13-202ENST00000378182 ARRDC1-AS1Q9H2J1 176 aa13.22□□□□□ -0.29
TRIM13-202ENST00000378182 SPDEFO95238 335 aa13.22□□□□□ -0.29
TRIM13-202ENST00000378182 FCGR2AP12318 317 aa13.22□□□□□ -0.29
TRIM13-202ENST00000378182 GSK3AP49840 483 aa13.22□□□□□ -0.29
TRIM13-202ENST00000378182 CXCR4P61073 352 aa13.22□□□□□ -0.29
TRIM13-202ENST00000378182 AMIGO3Q86WK7 504 aa13.22□□□□□ -0.29
TRIM13-202ENST00000378182 BHLHE23Q8NDY6 225 aa13.22□□□□□ -0.29
TRIM13-202ENST00000378182 OR4A16Q8NH70 328 aa13.22□□□□□ -0.29
TRIM13-202ENST00000378182 GNG12Q9UBI6 72 aa13.22□□□□□ -0.29
TRIM13-202ENST00000378182 RIMS3Q9UJD0 308 aa13.22□□□□□ -0.29
TRIM13-202ENST00000378182 M0R1B8 84 aa13.22□□□□□ -0.29
TRIM13-202ENST00000378182 NDUFB2O95178 105 aa13.22□□□□□ -0.29
TRIM13-202ENST00000378182 CAPNS1P04632 268 aa13.22□□□□□ -0.29
TRIM13-202ENST00000378182 DCTP40126 519 aa13.22□□□□□ -0.29
TRIM13-202ENST00000378182 KIR2DS3Q14952 304 aa13.22□□□□□ -0.29
TRIM13-202ENST00000378182 TAZQ16635 292 aa13.22□□□□□ -0.29
TRIM13-202ENST00000378182 LCTLQ6UWM7 567 aa13.22□□□□□ -0.29
TRIM13-202ENST00000378182 GLB1L2Q8IW92 636 aa13.22□□□□□ -0.29
TRIM13-202ENST00000378182 PREBQ9HCU5 417 aa13.22□□□□□ -0.29
TRIM13-202ENST00000378182 PLCXD1Q9NUJ7 323 aa13.22□□□□□ -0.29
TRIM13-202ENST00000378182 PLEKHM1Q9Y4G2 1056 aa13.22□□□□□ -0.29
TRIM13-202ENST00000378182 EMP3P54852 163 aa13.22□□□□□ -0.29
TRIM13-202ENST00000378182 PCBD1P61457 104 aa13.22□□□□□ -0.29
TRIM13-202ENST00000378182 SPHARQ15513 63 aa13.22□□□□□ -0.29
TRIM13-202ENST00000378182 C17orf99Q6UX52 265 aa13.22□□□□□ -0.29
TRIM13-202ENST00000378182 COX15Q7KZN9 410 aa13.22□□□□□ -0.29
TRIM13-202ENST00000378182 OPA3Q9H6K4 179 aa13.22□□□□□ -0.29
TRIM13-202ENST00000378182 LANCL2Q9NS86 450 aa13.22□□□□□ -0.29
TRIM13-202ENST00000378182 PCDHA9Q9Y5H5 950 aa13.22□□□□□ -0.29
TRIM13-202ENST00000378182 A6NIN4 97 aa13.22□□□□□ -0.29
TRIM13-202ENST00000378182 ATP6V1G1O75348 118 aa13.22□□□□□ -0.29
TRIM13-202ENST00000378182 OXSR1O95747 527 aaPredicted RBP13.22□□□□□ -0.29
TRIM13-202ENST00000378182 CRYZL1O95825 349 aa13.22□□□□□ -0.29
TRIM13-202ENST00000378182 ZNF33AQ06730 810 aa13.22□□□□□ -0.29
TRIM13-202ENST00000378182 NDUFAF7Q7L592 441 aa13.22□□□□□ -0.29
TRIM13-202ENST00000378182 SCRN2Q96FV2 425 aa13.22□□□□□ -0.29
TRIM13-202ENST00000378182 PFDN5Q99471 154 aa13.22□□□□□ -0.29
TRIM13-202ENST00000378182 SLC35A3Q9Y2D2 325 aa13.22□□□□□ -0.29
TRIM13-202ENST00000378182 SERTM1A2A2V5 107 aa13.21□□□□□ -0.29
TRIM13-202ENST00000378182 HTR3AP46098 478 aa13.21□□□□□ -0.29
TRIM13-202ENST00000378182 AKR1C1Q04828 323 aa13.21□□□□□ -0.29
TRIM13-202ENST00000378182 OR1N1Q8NGS0 311 aa13.21□□□□□ -0.29
TRIM13-202ENST00000378182 PHOSPHO2Q8TCD6 241 aa13.21□□□□□ -0.29
TRIM13-202ENST00000378182 TMEM239Q8WW34 195 aa13.21□□□□□ -0.29
TRIM13-202ENST00000378182 PTTG2Q9NZH5 202 aa13.21□□□□□ -0.29
TRIM13-202ENST00000378182 H7C1C5 153 aa13.21□□□□□ -0.29
TRIM13-202ENST00000378182 TBX10O75333 385 aa13.21□□□□□ -0.29
TRIM13-202ENST00000378182 KDELR2P33947 212 aa13.21□□□□□ -0.29
TRIM13-202ENST00000378182 LCN6P62502 163 aa13.21□□□□□ -0.29
TRIM13-202ENST00000378182 MORN1Q5T089 497 aa13.21□□□□□ -0.29
TRIM13-202ENST00000378182 SLC22A25Q6T423 547 aa13.21□□□□□ -0.29
TRIM13-202ENST00000378182 DTD2Q96FN9 168 aa13.21□□□□□ -0.29
TRIM13-202ENST00000378182 ZDHHC18Q9NUE0 388 aa13.21□□□□□ -0.29
TRIM13-202ENST00000378182 MRPS2Q9Y399 296 aaKnown RBP13.21□□□□□ -0.29
TRIM13-202ENST00000378182 NXPH2O95156 264 aa13.21□□□□□ -0.29
TRIM13-202ENST00000378182 ZNF92Q03936 586 aa13.21□□□□□ -0.29
TRIM13-202ENST00000378182 TLDC1Q6P9B6 456 aa13.21□□□□□ -0.29
TRIM13-202ENST00000378182 WFDC8Q8IUA0 241 aa13.21□□□□□ -0.29
TRIM13-202ENST00000378182 C4orf36Q96KX1 117 aa13.21□□□□□ -0.29
TRIM13-202ENST00000378182 TEX10Q9NXF1 929 aaPredicted RBP13.21□□□□□ -0.29
TRIM13-202ENST00000378182 SGCEO43556 437 aa13.21□□□□□ -0.29
TRIM13-202ENST00000378182 FOXD2O60548 495 aaPredicted RBP13.21□□□□□ -0.29
TRIM13-202ENST00000378182 EEDO75530 441 aaKnown RBP13.21□□□□□ -0.29
TRIM13-202ENST00000378182 FGF3P11487 239 aaPredicted RBP13.21□□□□□ -0.29
TRIM13-202ENST00000378182 BAIAP2L2Q6UXY1 529 aa13.21□□□□□ -0.29
TRIM13-202ENST00000378182 AAED1Q7RTV5 226 aa13.21□□□□□ -0.29
TRIM13-202ENST00000378182 PIGWQ7Z7B1 504 aa13.21□□□□□ -0.29
TRIM13-202ENST00000378182 TMEM178AQ8NBL3 297 aa13.21□□□□□ -0.29
TRIM13-202ENST00000378182 OR7D2Q96RA2 312 aa13.21□□□□□ -0.29
TRIM13-202ENST00000378182 NARFLQ9H6Q4 476 aa13.21□□□□□ -0.29
TRIM13-202ENST00000378182 SPO11Q9Y5K1 396 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms