RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 LRRC37A2A6NM11 1700 aa13.46□□□□□ -0.25
TCOF1-202ENST00000377797 A0A1B0GVI7 797 aa13.46□□□□□ -0.25
TCOF1-202ENST00000377797 OR2W5A6NFC9 320 aa13.46□□□□□ -0.25
TCOF1-202ENST00000377797 LILRA5A6NI73 299 aa13.46□□□□□ -0.25
TCOF1-202ENST00000377797 ORC5O43913 435 aa13.46□□□□□ -0.25
TCOF1-202ENST00000377797 UTS2O95399 124 aa13.46□□□□□ -0.25
TCOF1-202ENST00000377797 FAM53BQ14153 422 aa13.46□□□□□ -0.25
TCOF1-202ENST00000377797 ELAVL1Q15717 326 aaKnown RBP13.46□□□□□ -0.25
TCOF1-202ENST00000377797 IL20RBQ6UXL0 311 aa13.46□□□□□ -0.25
TCOF1-202ENST00000377797 GOT1L1Q8NHS2 421 aaPredicted RBP13.46□□□□□ -0.25
TCOF1-202ENST00000377797 GDF15Q99988 308 aa13.46□□□□□ -0.25
TCOF1-202ENST00000377797 PCED1AQ9H1Q7 454 aa13.46□□□□□ -0.25
TCOF1-202ENST00000377797 SRCAPQ6ZRS2 3230 aa13.46□□□□□ -0.25
TCOF1-202ENST00000377797 IGHV3-20A0A0C4DH32 117 aa13.46□□□□□ -0.26
TCOF1-202ENST00000377797 PIAS2O75928 621 aa13.46□□□□□ -0.26
TCOF1-202ENST00000377797 ZNF43P17038 809 aa13.46□□□□□ -0.26
TCOF1-202ENST00000377797 ARHGAP11BQ3KRB8 267 aa13.46□□□□□ -0.26
TCOF1-202ENST00000377797 TP53I3Q53FA7 332 aa13.46□□□□□ -0.26
TCOF1-202ENST00000377797 ZNF101Q8IZC7 436 aa13.46□□□□□ -0.26
TCOF1-202ENST00000377797 NT5CQ8TCD5 201 aa13.46□□□□□ -0.26
TCOF1-202ENST00000377797 POLE3Q9NRF9 147 aa13.46□□□□□ -0.26
TCOF1-202ENST00000377797 SEMA4GQ9NTN9 838 aa13.46□□□□□ -0.26
TCOF1-202ENST00000377797 SLC6A14Q9UN76 642 aa13.46□□□□□ -0.26
TCOF1-202ENST00000377797 TACR3P29371 465 aa13.45□□□□□ -0.26
TCOF1-202ENST00000377797 GDPGP1Q6ZNW5 385 aa13.45□□□□□ -0.26
TCOF1-202ENST00000377797 ZNF283Q8N7M2 679 aa13.45□□□□□ -0.26
TCOF1-202ENST00000377797 OR5B2Q96R09 309 aa13.45□□□□□ -0.26
TCOF1-202ENST00000377797 EXTL2Q9UBQ6 330 aa13.45□□□□□ -0.26
TCOF1-202ENST00000377797 PIKFYVEQ9Y2I7 2098 aa13.45□□□□□ -0.26
TCOF1-202ENST00000377797 RAB25P57735 213 aa13.45□□□□□ -0.26
TCOF1-202ENST00000377797 C1orf94Q6P1W5 598 aa13.45□□□□□ -0.26
TCOF1-202ENST00000377797 ZNF627Q7L945 461 aa13.45□□□□□ -0.26
TCOF1-202ENST00000377797 SYT14Q8NB59 555 aa13.45□□□□□ -0.26
TCOF1-202ENST00000377797 OR14L1PQ8NHC6 308 aa13.45□□□□□ -0.26
TCOF1-202ENST00000377797 THRSPQ92748 146 aa13.45□□□□□ -0.26
TCOF1-202ENST00000377797 RPL3LQ92901 407 aaKnown RBP13.45□□□□□ -0.26
TCOF1-202ENST00000377797 OR2A5Q96R48 311 aa13.45□□□□□ -0.26
TCOF1-202ENST00000377797 NTN4Q9HB63 628 aa13.45□□□□□ -0.26
TCOF1-202ENST00000377797 FAM186AA6NE01 2351 aa13.45□□□□□ -0.26
TCOF1-202ENST00000377797 CLDN24A6NM45 220 aa13.45□□□□□ -0.26
TCOF1-202ENST00000377797 F13BP05160 661 aa13.45□□□□□ -0.26
TCOF1-202ENST00000377797 ACP2P11117 423 aa13.45□□□□□ -0.26
TCOF1-202ENST00000377797 OR7A5Q15622 319 aa13.45□□□□□ -0.26
TCOF1-202ENST00000377797 OR2G6Q5TZ20 316 aa13.45□□□□□ -0.26
TCOF1-202ENST00000377797 PRICKLE2Q7Z3G6 844 aa13.45□□□□□ -0.26
TCOF1-202ENST00000377797 OR7G1Q8NGA0 311 aa13.45□□□□□ -0.26
TCOF1-202ENST00000377797 SPRYD4Q8WW59 207 aaPredicted RBP13.45□□□□□ -0.26
TCOF1-202ENST00000377797 PCDHGA6Q9Y5G7 932 aa13.45□□□□□ -0.26
TCOF1-202ENST00000377797 PCDHGA10Q9Y5H3 936 aa13.45□□□□□ -0.26
TCOF1-202ENST00000377797 RPS5P46782 204 aaKnown RBP13.45□□□□□ -0.26
TCOF1-202ENST00000377797 ABI3BPQ7Z7G0 1075 aa13.45□□□□□ -0.26
TCOF1-202ENST00000377797 ARSGQ96EG1 525 aa13.45□□□□□ -0.26
TCOF1-202ENST00000377797 WDR77Q9BQA1 342 aaPredicted RBP13.45□□□□□ -0.26
TCOF1-202ENST00000377797 WACQ9BTA9 647 aa13.45□□□□□ -0.26
TCOF1-202ENST00000377797 ANKRD19PQ9H560 264 aa13.45□□□□□ -0.26
TCOF1-202ENST00000377797 MCCC2Q9HCC0 563 aa13.45□□□□□ -0.26
TCOF1-202ENST00000377797 VNN3Q9NY84 501 aa13.45□□□□□ -0.26
TCOF1-202ENST00000377797 SCN5AQ14524 2016 aa13.45□□□□□ -0.26
TCOF1-202ENST00000377797 P2RX6O15547 441 aa13.44□□□□□ -0.26
TCOF1-202ENST00000377797 CSRP3P50461 194 aa13.44□□□□□ -0.26
TCOF1-202ENST00000377797 EEF1A1P5Q5VTE0 462 aa13.44□□□□□ -0.26
TCOF1-202ENST00000377797 ZNF613Q6PF04 617 aa13.44□□□□□ -0.26
TCOF1-202ENST00000377797 OPN5Q6U736 354 aa13.44□□□□□ -0.26
TCOF1-202ENST00000377797 BCDIN3DQ7Z5W3 292 aaKnown RBP13.44□□□□□ -0.26
TCOF1-202ENST00000377797 ANKRD13BQ86YJ7 626 aa13.44□□□□□ -0.26
TCOF1-202ENST00000377797 TOMM5Q8N4H5 51 aa13.44□□□□□ -0.26
TCOF1-202ENST00000377797 MINDY2Q8NBR6 621 aa13.44□□□□□ -0.26
TCOF1-202ENST00000377797 DSN1Q9H410 356 aa13.44□□□□□ -0.26
TCOF1-202ENST00000377797 MED20Q9H944 212 aa13.44□□□□□ -0.26
TCOF1-202ENST00000377797 TAS2R16Q9NYV7 291 aa13.44□□□□□ -0.26
TCOF1-202ENST00000377797 ING4Q9UNL4 249 aa13.44□□□□□ -0.26
TCOF1-202ENST00000377797 TVP23AA6NH52 213 aa13.44□□□□□ -0.26
TCOF1-202ENST00000377797 TMX2-CTNND1H3BSU7 103 aa13.44□□□□□ -0.26
TCOF1-202ENST00000377797 RGS9O75916 674 aaPredicted RBP13.44□□□□□ -0.26
TCOF1-202ENST00000377797 TPTEP56180 551 aa13.44□□□□□ -0.26
TCOF1-202ENST00000377797 SLX4IPQ5VYV7 408 aa13.44□□□□□ -0.26
TCOF1-202ENST00000377797 MEPCEQ7L2J0 689 aaKnown RBP13.44□□□□□ -0.26
TCOF1-202ENST00000377797 VN1R4Q7Z5H5 301 aa13.44□□□□□ -0.26
TCOF1-202ENST00000377797 CENPSQ8N2Z9 138 aa13.44□□□□□ -0.26
TCOF1-202ENST00000377797 TSLPQ969D9 159 aa13.44□□□□□ -0.26
TCOF1-202ENST00000377797 MBOAT4Q96T53 435 aa13.44□□□□□ -0.26
TCOF1-202ENST00000377797 CDX2Q99626 313 aaPredicted RBP13.44□□□□□ -0.26
TCOF1-202ENST00000377797 NAA11Q9BSU3 229 aaPredicted RBP13.44□□□□□ -0.26
TCOF1-202ENST00000377797 PDCD10Q9BUL8 212 aa13.44□□□□□ -0.26
TCOF1-202ENST00000377797 EML2O95834 649 aa13.44□□□□□ -0.26
TCOF1-202ENST00000377797 FPR3P25089 353 aa13.44□□□□□ -0.26
TCOF1-202ENST00000377797 RIDAP52758 137 aaKnown RBP13.44□□□□□ -0.26
TCOF1-202ENST00000377797 DCAF12Q5T6F0 453 aa13.44□□□□□ -0.26
TCOF1-202ENST00000377797 UEVLDQ8IX04 471 aa13.44□□□□□ -0.26
TCOF1-202ENST00000377797 SLC15A4Q8N697 577 aa13.44□□□□□ -0.26
TCOF1-202ENST00000377797 MUL1Q969V5 352 aa13.44□□□□□ -0.26
TCOF1-202ENST00000377797 KATNB1Q9BVA0 655 aa13.44□□□□□ -0.26
TCOF1-202ENST00000377797 INIPQ9NRY2 104 aa13.44□□□□□ -0.26
TCOF1-202ENST00000377797 NTNG1Q9Y2I2 539 aa13.44□□□□□ -0.26
TCOF1-202ENST00000377797 H0YIG0 161 aa13.44□□□□□ -0.26
TCOF1-202ENST00000377797 THBS1P07996 1170 aa13.44□□□□□ -0.26
TCOF1-202ENST00000377797 SMIM18P0DKX4 95 aa13.44□□□□□ -0.26
TCOF1-202ENST00000377797 STT3BQ8TCJ2 826 aa13.44□□□□□ -0.26
TCOF1-202ENST00000377797 HIST1H2AAQ96QV6 131 aa13.44□□□□□ -0.26
TCOF1-202ENST00000377797 C14orf119Q9NWQ9 140 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms