RNA–Protein interactions for RNA: ENST00000377625.6

TBC1D4-201, Transcript of TBC1 domain family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TBC1D4, Length 6,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4-201ENST00000377625 FOXRED1Q96CU9 486 aaPredicted RBP17.79■□□□□ 0.44
TBC1D4-201ENST00000377625 SDSLQ96GA7 329 aa17.79■□□□□ 0.44
TBC1D4-201ENST00000377625 C3orf30Q96M34 536 aa17.79■□□□□ 0.44
TBC1D4-201ENST00000377625 COQ10AQ96MF6 247 aa17.79■□□□□ 0.44
TBC1D4-201ENST00000377625 AGPAT4Q9NRZ5 378 aa17.79■□□□□ 0.44
TBC1D4-201ENST00000377625 PISDQ9UG56 409 aa17.79■□□□□ 0.44
TBC1D4-201ENST00000377625 BAZ2AQ9UIF9 1905 aaKnown RBP17.79■□□□□ 0.44
TBC1D4-201ENST00000377625 SETD1AO15047 1707 aaKnown RBP17.79■□□□□ 0.44
TBC1D4-201ENST00000377625 ARGFXA6NJG6 315 aa17.79■□□□□ 0.44
TBC1D4-201ENST00000377625 KDM4EB2RXH2 506 aaPredicted RBP17.79■□□□□ 0.44
TBC1D4-201ENST00000377625 UPK1BO75841 260 aa17.79■□□□□ 0.44
TBC1D4-201ENST00000377625 CDK1P06493 297 aa17.79■□□□□ 0.44
TBC1D4-201ENST00000377625 RGRP47804 291 aa17.79■□□□□ 0.44
TBC1D4-201ENST00000377625 AGAP7PQ5VUJ5 663 aa17.79■□□□□ 0.44
TBC1D4-201ENST00000377625 AGAP6Q5VW22 663 aa17.79■□□□□ 0.44
TBC1D4-201ENST00000377625 LCN10Q6JVE6 187 aa17.79■□□□□ 0.44
TBC1D4-201ENST00000377625 OPN5Q6U736 354 aa17.79■□□□□ 0.44
TBC1D4-201ENST00000377625 MALSU1Q96EH3 234 aa17.79■□□□□ 0.44
TBC1D4-201ENST00000377625 AGAP4Q96P64 663 aa17.79■□□□□ 0.44
TBC1D4-201ENST00000377625 PRRT1Q99946 306 aa17.79■□□□□ 0.44
TBC1D4-201ENST00000377625 ZNF334Q9HCZ1 680 aaPredicted RBP17.79■□□□□ 0.44
TBC1D4-201ENST00000377625 CCDC163A0A0D9SF12 145 aa17.79■□□□□ 0.44
TBC1D4-201ENST00000377625 TMEM269A0A1B0GVZ9 245 aa17.79■□□□□ 0.44
TBC1D4-201ENST00000377625 B4DXG7 233 aa17.79■□□□□ 0.44
TBC1D4-201ENST00000377625 EFNA3P52797 238 aa17.79■□□□□ 0.44
TBC1D4-201ENST00000377625 ZP2Q05996 745 aa17.79■□□□□ 0.44
TBC1D4-201ENST00000377625 RPE65Q16518 533 aa17.79■□□□□ 0.44
TBC1D4-201ENST00000377625 FAM69AQ5T7M9 428 aa17.79■□□□□ 0.44
TBC1D4-201ENST00000377625 VASNQ6EMK4 673 aa17.79■□□□□ 0.44
TBC1D4-201ENST00000377625 NIPAL3Q6P499 406 aa17.79■□□□□ 0.44
TBC1D4-201ENST00000377625 TECPR1Q7Z6L1 1165 aa17.79■□□□□ 0.44
TBC1D4-201ENST00000377625 MKXQ8IYA7 352 aa17.79■□□□□ 0.44
TBC1D4-201ENST00000377625 RNF175Q8N4F7 328 aa17.79■□□□□ 0.44
TBC1D4-201ENST00000377625 TMEM163Q8TC26 289 aa17.79■□□□□ 0.44
TBC1D4-201ENST00000377625 GIMAP5Q96F15 307 aa17.79■□□□□ 0.44
TBC1D4-201ENST00000377625 CSNK1G1Q9HCP0 422 aa17.79■□□□□ 0.44
TBC1D4-201ENST00000377625 PDE4DIPQ5VU43 2346 aa17.79■□□□□ 0.44
TBC1D4-201ENST00000377625 C1SP09871 688 aa17.78■□□□□ 0.44
TBC1D4-201ENST00000377625 HLA-FP30511 346 aa17.78■□□□□ 0.44
TBC1D4-201ENST00000377625 SF3A2Q15428 464 aaKnown RBP17.78■□□□□ 0.44
TBC1D4-201ENST00000377625 SYPL1Q16563 259 aa17.78■□□□□ 0.44
TBC1D4-201ENST00000377625 OBP2BQ9NPH6 170 aa17.78■□□□□ 0.44
TBC1D4-201ENST00000377625 PRAF2O60831 178 aa17.78■□□□□ 0.44
TBC1D4-201ENST00000377625 MCCD1P59942 119 aaPredicted RBP17.78■□□□□ 0.44
TBC1D4-201ENST00000377625 PCBD1P61457 104 aa17.78■□□□□ 0.44
TBC1D4-201ENST00000377625 MEF2DQ14814 521 aa17.78■□□□□ 0.44
TBC1D4-201ENST00000377625 PGGHGQ32M88 737 aa17.78■□□□□ 0.44
TBC1D4-201ENST00000377625 GPR139Q6DWJ6 353 aa17.78■□□□□ 0.44
TBC1D4-201ENST00000377625 IL20RBQ6UXL0 311 aa17.78■□□□□ 0.44
TBC1D4-201ENST00000377625 C7orf50Q9BRJ6 194 aaKnown RBP17.78■□□□□ 0.44
TBC1D4-201ENST00000377625 EVA1AQ9H8M9 152 aa17.78■□□□□ 0.44
TBC1D4-201ENST00000377625 FAM183AA6NL82 134 aa17.78■□□□□ 0.44
TBC1D4-201ENST00000377625 GJB3O75712 270 aa17.78■□□□□ 0.44
TBC1D4-201ENST00000377625 OR1D4P47884 311 aa17.78■□□□□ 0.44
TBC1D4-201ENST00000377625 HTRA3P83110 453 aa17.78■□□□□ 0.44
TBC1D4-201ENST00000377625 MOB3CQ70IA8 216 aa17.78■□□□□ 0.44
TBC1D4-201ENST00000377625 ULBP2Q9BZM5 246 aa17.78■□□□□ 0.44
TBC1D4-201ENST00000377625 PPP1R14DQ9NXH3 145 aa17.78■□□□□ 0.44
TBC1D4-201ENST00000377625 TESQ9UGI8 421 aaKnown RBP17.78■□□□□ 0.44
TBC1D4-201ENST00000377625 SERPINA2P20848 420 aa17.78■□□□□ 0.44
TBC1D4-201ENST00000377625 SPOCK1Q08629 439 aa17.78■□□□□ 0.44
TBC1D4-201ENST00000377625 TSSK4Q6SA08 328 aa17.78■□□□□ 0.44
TBC1D4-201ENST00000377625 MMP21Q8N119 569 aa17.78■□□□□ 0.44
TBC1D4-201ENST00000377625 CNTNAP3BQ96NU0 1288 aa17.78■□□□□ 0.44
TBC1D4-201ENST00000377625 FAM53CQ9NYF3 392 aa17.78■□□□□ 0.44
TBC1D4-201ENST00000377625 A0A0U1RQK1 487 aa17.78■□□□□ 0.44
TBC1D4-201ENST00000377625 BMP1P13497 986 aa17.78■□□□□ 0.44
TBC1D4-201ENST00000377625 MAGEA6P43360 314 aa17.78■□□□□ 0.44
TBC1D4-201ENST00000377625 ATP1B3P54709 279 aa17.78■□□□□ 0.44
TBC1D4-201ENST00000377625 DCAF7P61962 342 aa17.78■□□□□ 0.44
TBC1D4-201ENST00000377625 EXOSC6Q5RKV6 272 aaKnown RBP17.78■□□□□ 0.44
TBC1D4-201ENST00000377625 EGLN2Q96KS0 407 aa17.78■□□□□ 0.44
TBC1D4-201ENST00000377625 INSM2Q96T92 566 aaPredicted RBP17.78■□□□□ 0.44
TBC1D4-201ENST00000377625 ZNF142P52746 1687 aaPredicted RBP17.77■□□□□ 0.44
TBC1D4-201ENST00000377625 ZNF780AO75290 641 aaPredicted RBP17.77■□□□□ 0.44
TBC1D4-201ENST00000377625 TP53P04637 393 aaPredicted RBP17.77■□□□□ 0.44
TBC1D4-201ENST00000377625 CD79BP40259 229 aa17.77■□□□□ 0.44
TBC1D4-201ENST00000377625 GPR18Q14330 331 aa17.77■□□□□ 0.44
TBC1D4-201ENST00000377625 CBLL1Q75N03 491 aa17.77■□□□□ 0.44
TBC1D4-201ENST00000377625 ARRDC2Q8TBH0 407 aa17.77■□□□□ 0.44
TBC1D4-201ENST00000377625 NALCNQ8IZF0 1738 aa17.77■□□□□ 0.44
TBC1D4-201ENST00000377625 PRDX1Q06830 199 aaKnown RBP17.77■□□□□ 0.44
TBC1D4-201ENST00000377625 FAM83HQ6ZRV2 1179 aaPredicted RBP17.77■□□□□ 0.44
TBC1D4-201ENST00000377625 PIGCQ92535 297 aa17.77■□□□□ 0.44
TBC1D4-201ENST00000377625 DYNLRB1Q9NP97 96 aa17.77■□□□□ 0.44
TBC1D4-201ENST00000377625 BOKQ9UMX3 212 aaPredicted RBP17.77■□□□□ 0.44
TBC1D4-201ENST00000377625 MDFIC2A0A1B0GVS7 189 aa17.77■□□□□ 0.44
TBC1D4-201ENST00000377625 GALR3O60755 368 aaPredicted RBP17.77■□□□□ 0.44
TBC1D4-201ENST00000377625 IDH3GP51553 393 aaPredicted RBP17.77■□□□□ 0.44
TBC1D4-201ENST00000377625 KCNJ10P78508 379 aa17.77■□□□□ 0.44
TBC1D4-201ENST00000377625 GPR155Q7Z3F1 870 aa17.77■□□□□ 0.44
TBC1D4-201ENST00000377625 PIWIL3Q7Z3Z3 882 aaKnown RBP17.77■□□□□ 0.44
TBC1D4-201ENST00000377625 SULF2Q8IWU5 870 aa17.77■□□□□ 0.44
TBC1D4-201ENST00000377625 SPARTQ8N0X7 666 aa17.77■□□□□ 0.44
TBC1D4-201ENST00000377625 EID2Q8N6I1 236 aa17.77■□□□□ 0.44
TBC1D4-201ENST00000377625 NUDT22Q9BRQ3 303 aa17.77■□□□□ 0.44
TBC1D4-201ENST00000377625 HCFC2Q9Y5Z7 792 aa17.77■□□□□ 0.44
TBC1D4-201ENST00000377625 ITGAMP11215 1152 aa17.77■□□□□ 0.43
TBC1D4-201ENST00000377625 MARCH8Q5T0T0 291 aa17.77■□□□□ 0.43
TBC1D4-201ENST00000377625 BRIX1Q8TDN6 353 aaKnown RBP17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms