RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 TIMP2P16035 220 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 GABRA2P47869 451 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 OR4D1Q15615 310 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 ATPAF1Q5TC12 328 aaPredicted RBP11.74□□□□□ -0.53
VPS13A-204ENST00000376634 TOGARAM1Q9Y4F4 1720 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 OLFM2O95897 454 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 PENKP01210 267 aaPredicted RBP11.74□□□□□ -0.53
VPS13A-204ENST00000376634 SERPINA2P20848 420 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 GATMP50440 423 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 ZNF280AP59817 542 aaPredicted RBP11.74□□□□□ -0.53
VPS13A-204ENST00000376634 OR7A5Q15622 319 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 SLX4IPQ5VYV7 408 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 PQLC3Q8N755 202 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 NANPQ8TBE9 248 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 ZNF355PQ9NSJ1 428 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 SMOXQ9NWM0 555 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 hCG_1809904A0A1W2PP81 198 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 A0A1W2PPE2 198 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 A0A1W2PR64 198 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 A0A1W2PRV1 198 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 GABARAPH6UMI1 98 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 GABARAPO95166 117 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 OSMP13725 252 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 TMEM41BQ5BJD5 291 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 ZMYND19Q96E35 227 aaPredicted RBP11.74□□□□□ -0.53
VPS13A-204ENST00000376634 ARNT2Q9HBZ2 717 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 TMX2-CTNND1H3BSU7 103 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 ZNF542PQ5EBM4 170 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 OSTM1Q86WC4 334 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 ZNF761Q86XN6 746 aaPredicted RBP11.74□□□□□ -0.53
VPS13A-204ENST00000376634 RBMXL3Q8N7X1 1067 aaKnown RBP11.74□□□□□ -0.53
VPS13A-204ENST00000376634 OR7G1Q8NGA0 311 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 ANKRD9Q96BM1 317 aaPredicted RBP11.74□□□□□ -0.53
VPS13A-204ENST00000376634 NXF5Q9H1B4 397 aaKnown RBP11.74□□□□□ -0.53
VPS13A-204ENST00000376634 ZNF696Q9H7X3 374 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 OLAHQ9NV23 265 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 EHFQ9NZC4 300 aa11.74□□□□□ -0.53
VPS13A-204ENST00000376634 CRHBPP24387 322 aa11.73□□□□□ -0.53
VPS13A-204ENST00000376634 CNR2P34972 360 aa11.73□□□□□ -0.53
VPS13A-204ENST00000376634 SLC22A25Q6T423 547 aa11.73□□□□□ -0.53
VPS13A-204ENST00000376634 CNTNAP3Q9BZ76 1288 aa11.73□□□□□ -0.53
VPS13A-204ENST00000376634 HEMK1Q9Y5R4 338 aaPredicted RBP11.73□□□□□ -0.53
VPS13A-204ENST00000376634 FUOMA2VDF0 154 aa11.73□□□□□ -0.53
VPS13A-204ENST00000376634 YY2O15391 372 aa11.73□□□□□ -0.53
VPS13A-204ENST00000376634 CER1O95813 267 aa11.73□□□□□ -0.53
VPS13A-204ENST00000376634 NTSR1P30989 418 aa11.73□□□□□ -0.53
VPS13A-204ENST00000376634 MAP4K2Q12851 820 aa11.73□□□□□ -0.53
VPS13A-204ENST00000376634 NLRP8Q86W28 1048 aa11.73□□□□□ -0.53
VPS13A-204ENST00000376634 NKX3-1Q99801 234 aaPredicted RBP11.73□□□□□ -0.53
VPS13A-204ENST00000376634 LHPPQ9H008 270 aa11.73□□□□□ -0.53
VPS13A-204ENST00000376634 USP36Q9P275 1121 aaKnown RBP11.73□□□□□ -0.53
VPS13A-204ENST00000376634 SPTAN1Q13813 2472 aaKnown RBP11.73□□□□□ -0.53
VPS13A-204ENST00000376634 LCMT2O60294 686 aaKnown RBP11.73□□□□□ -0.53
VPS13A-204ENST00000376634 PROS1P07225 676 aa11.73□□□□□ -0.53
VPS13A-204ENST00000376634 HNRNPFP52597 415 aaKnown RBP11.73□□□□□ -0.53
VPS13A-204ENST00000376634 MRPS34P82930 218 aaKnown RBP11.73□□□□□ -0.53
VPS13A-204ENST00000376634 AKR1C1Q04828 323 aa11.73□□□□□ -0.53
VPS13A-204ENST00000376634 MFGE8Q08431 387 aaPredicted RBP11.73□□□□□ -0.53
VPS13A-204ENST00000376634 BTF3L4Q96K17 158 aa11.73□□□□□ -0.53
VPS13A-204ENST00000376634 GINS3Q9BRX5 216 aa11.73□□□□□ -0.53
VPS13A-204ENST00000376634 SSTR4P31391 388 aa11.73□□□□□ -0.53
VPS13A-204ENST00000376634 UBE2KP61086 200 aa11.73□□□□□ -0.53
VPS13A-204ENST00000376634 EIF4HQ15056 248 aaKnown RBP11.73□□□□□ -0.53
VPS13A-204ENST00000376634 PLAG1Q6DJT9 500 aa11.73□□□□□ -0.53
VPS13A-204ENST00000376634 PGAP1Q75T13 922 aa11.73□□□□□ -0.53
VPS13A-204ENST00000376634 ASB17Q8WXJ9 295 aa11.73□□□□□ -0.53
VPS13A-204ENST00000376634 OR6C2Q9NZP2 312 aa11.73□□□□□ -0.53
VPS13A-204ENST00000376634 KCNK5O95279 499 aa11.73□□□□□ -0.53
VPS13A-204ENST00000376634 FDXRP22570 491 aa11.73□□□□□ -0.53
VPS13A-204ENST00000376634 UBE2G2P60604 165 aa11.73□□□□□ -0.53
VPS13A-204ENST00000376634 CD300LGQ6UXG3 332 aa11.73□□□□□ -0.53
VPS13A-204ENST00000376634 OR4K5Q8NGD3 323 aa11.73□□□□□ -0.53
VPS13A-204ENST00000376634 OR2T27Q8NH04 317 aa11.73□□□□□ -0.53
VPS13A-204ENST00000376634 MUCL1Q96DR8 90 aa11.73□□□□□ -0.53
VPS13A-204ENST00000376634 ZNF416Q9BWM5 594 aa11.73□□□□□ -0.53
VPS13A-204ENST00000376634 MFFQ9GZY8 342 aa11.73□□□□□ -0.53
VPS13A-204ENST00000376634 GNB4Q9HAV0 340 aa11.73□□□□□ -0.53
VPS13A-204ENST00000376634 RDH14Q9HBH5 336 aa11.73□□□□□ -0.53
VPS13A-204ENST00000376634 HEPACAM2A8MVW5 462 aa11.73□□□□□ -0.53
VPS13A-204ENST00000376634 C17orf112F2Z3M2 114 aa11.73□□□□□ -0.53
VPS13A-204ENST00000376634 EGFP01133 1207 aa11.73□□□□□ -0.53
VPS13A-204ENST00000376634 TAS2R19P59542 299 aa11.73□□□□□ -0.53
VPS13A-204ENST00000376634 CPOQ8IVL8 374 aa11.73□□□□□ -0.53
VPS13A-204ENST00000376634 FAM160A2Q8N612 972 aaPredicted RBP11.73□□□□□ -0.53
VPS13A-204ENST00000376634 OR6F1Q8NGZ6 308 aa11.73□□□□□ -0.53
VPS13A-204ENST00000376634 OR56B4Q8NH76 319 aa11.73□□□□□ -0.53
VPS13A-204ENST00000376634 FCRL3Q96P31 734 aaPredicted RBP11.73□□□□□ -0.53
VPS13A-204ENST00000376634 DECR2Q9NUI1 292 aa11.73□□□□□ -0.53
VPS13A-204ENST00000376634 SH3BGRL2Q9UJC5 107 aa11.73□□□□□ -0.53
VPS13A-204ENST00000376634 VDAC3Q9Y277 283 aa11.73□□□□□ -0.53
VPS13A-204ENST00000376634 RAD1O60671 282 aa11.73□□□□□ -0.53
VPS13A-204ENST00000376634 GALEQ14376 348 aa11.73□□□□□ -0.53
VPS13A-204ENST00000376634 CLVS2Q5SYC1 327 aa11.73□□□□□ -0.53
VPS13A-204ENST00000376634 ZNF439Q8NDP4 499 aa11.73□□□□□ -0.53
VPS13A-204ENST00000376634 C12orf42Q96LP6 360 aa11.73□□□□□ -0.53
VPS13A-204ENST00000376634 SIDT1Q9NXL6 827 aaKnown RBP11.73□□□□□ -0.53
VPS13A-204ENST00000376634 CAMK2AQ9UQM7 478 aa11.73□□□□□ -0.53
VPS13A-204ENST00000376634 FIGLAQ6QHK4 219 aa11.73□□□□□ -0.53
VPS13A-204ENST00000376634 DMBX1Q8NFW5 382 aa11.73□□□□□ -0.53
VPS13A-204ENST00000376634 PLEK2Q9NYT0 353 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms