RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 OR10A4Q9H209 315 aa12.71□□□□□ -0.38
C9orf47-203ENST00000375851 PAQR5Q9NXK6 330 aaPredicted RBP12.71□□□□□ -0.38
C9orf47-203ENST00000375851 MAB21L2Q9Y586 359 aa12.71□□□□□ -0.38
C9orf47-203ENST00000375851 LRIT2A6NDA9 550 aa12.71□□□□□ -0.38
C9orf47-203ENST00000375851 TSPAN4O14817 238 aa12.71□□□□□ -0.38
C9orf47-203ENST00000375851 F13BP05160 661 aa12.71□□□□□ -0.38
C9orf47-203ENST00000375851 TSFMP43897 325 aaKnown RBP12.71□□□□□ -0.38
C9orf47-203ENST00000375851 ILKQ13418 452 aa12.71□□□□□ -0.38
C9orf47-203ENST00000375851 GAB1Q13480 694 aa12.71□□□□□ -0.38
C9orf47-203ENST00000375851 SPCS2Q15005 226 aa12.71□□□□□ -0.38
C9orf47-203ENST00000375851 FAM205BPQ63HN1 556 aa12.71□□□□□ -0.38
C9orf47-203ENST00000375851 GPR139Q6DWJ6 353 aa12.71□□□□□ -0.38
C9orf47-203ENST00000375851 ASCC1Q8N9N2 400 aaKnown RBP12.71□□□□□ -0.38
C9orf47-203ENST00000375851 GALNT11Q8NCW6 608 aa12.71□□□□□ -0.38
C9orf47-203ENST00000375851 OR5J2Q8NH18 312 aa12.71□□□□□ -0.38
C9orf47-203ENST00000375851 SLC6A18Q96N87 628 aa12.71□□□□□ -0.38
C9orf47-203ENST00000375851 SLC25A18Q9H1K4 315 aa12.71□□□□□ -0.38
C9orf47-203ENST00000375851 ZNF442Q9H7R0 627 aa12.71□□□□□ -0.38
C9orf47-203ENST00000375851 SACM1LQ9NTJ5 587 aa12.71□□□□□ -0.38
C9orf47-203ENST00000375851 PARPBPQ9NWS1 579 aa12.71□□□□□ -0.38
C9orf47-203ENST00000375851 HS3ST3A1Q9Y663 406 aa12.71□□□□□ -0.38
C9orf47-203ENST00000375851 F5H5K5 113 aa12.7□□□□□ -0.38
C9orf47-203ENST00000375851 SYT5O00445 386 aa12.7□□□□□ -0.38
C9orf47-203ENST00000375851 SSTR4P31391 388 aa12.7□□□□□ -0.38
C9orf47-203ENST00000375851 PTH2RP49190 550 aa12.7□□□□□ -0.38
C9orf47-203ENST00000375851 PYCR3Q53H96 274 aa12.7□□□□□ -0.38
C9orf47-203ENST00000375851 C6orf183Q5T699 404 aa12.7□□□□□ -0.38
C9orf47-203ENST00000375851 CYHR1Q6ZMK1 362 aa12.7□□□□□ -0.38
C9orf47-203ENST00000375851 SEMA6CQ9H3T2 930 aa12.7□□□□□ -0.38
C9orf47-203ENST00000375851 RANBP3Q9H6Z4 567 aaPredicted RBP12.7□□□□□ -0.38
C9orf47-203ENST00000375851 A4GALTQ9NPC4 353 aa12.7□□□□□ -0.38
C9orf47-203ENST00000375851 FAIMQ9NVQ4 179 aa12.7□□□□□ -0.38
C9orf47-203ENST00000375851 WASF3Q9UPY6 502 aa12.7□□□□□ -0.38
C9orf47-203ENST00000375851 FAM155AB1AL88 458 aaPredicted RBP12.7□□□□□ -0.38
C9orf47-203ENST00000375851 PEX11BO96011 259 aa12.7□□□□□ -0.38
C9orf47-203ENST00000375851 LCATP04180 440 aa12.7□□□□□ -0.38
C9orf47-203ENST00000375851 AMY2AP04746 511 aa12.7□□□□□ -0.38
C9orf47-203ENST00000375851 IL7P13232 177 aa12.7□□□□□ -0.38
C9orf47-203ENST00000375851 HTR3AP46098 478 aa12.7□□□□□ -0.38
C9orf47-203ENST00000375851 AFF3P51826 1226 aaKnown RBP12.7□□□□□ -0.38
C9orf47-203ENST00000375851 B3GLCTQ6Y288 498 aa12.7□□□□□ -0.38
C9orf47-203ENST00000375851 LRRC56Q8IYG6 542 aaPredicted RBP12.7□□□□□ -0.38
C9orf47-203ENST00000375851 SIDT1Q9NXL6 827 aaKnown RBP12.7□□□□□ -0.38
C9orf47-203ENST00000375851 GLS2Q9UI32 602 aa12.7□□□□□ -0.38
C9orf47-203ENST00000375851 PCDHGA3Q9Y5H0 932 aa12.7□□□□□ -0.38
C9orf47-203ENST00000375851 TRBV5-4A0A0C4DH59 114 aa12.7□□□□□ -0.38
C9orf47-203ENST00000375851 CLDN24A6NM45 220 aa12.7□□□□□ -0.38
C9orf47-203ENST00000375851 TARM1B6A8C7 271 aa12.7□□□□□ -0.38
C9orf47-203ENST00000375851 KLK8O60259 260 aa12.7□□□□□ -0.38
C9orf47-203ENST00000375851 GALR3O60755 368 aaPredicted RBP12.7□□□□□ -0.38
C9orf47-203ENST00000375851 RPS5P46782 204 aaKnown RBP12.7□□□□□ -0.38
C9orf47-203ENST00000375851 SMAD2Q15796 467 aaKnown RBP12.7□□□□□ -0.38
C9orf47-203ENST00000375851 AWAT2Q6E213 333 aa12.7□□□□□ -0.38
C9orf47-203ENST00000375851 LSM14AQ8ND56 463 aaKnown RBP12.7□□□□□ -0.38
C9orf47-203ENST00000375851 NIPSNAP1Q9BPW8 284 aa12.7□□□□□ -0.38
C9orf47-203ENST00000375851 OR10A5Q9H207 317 aa12.7□□□□□ -0.38
C9orf47-203ENST00000375851 CD93Q9NPY3 652 aa12.7□□□□□ -0.38
C9orf47-203ENST00000375851 MYEF2Q9P2K5 600 aaKnown RBP12.7□□□□□ -0.38
C9orf47-203ENST00000375851 SIT1Q9Y3P8 196 aa12.7□□□□□ -0.38
C9orf47-203ENST00000375851 SSC5DA1L4H1 1573 aa12.7□□□□□ -0.38
C9orf47-203ENST00000375851 FUOMA2VDF0 154 aa12.69□□□□□ -0.38
C9orf47-203ENST00000375851 ZNF850A8MQ14 1090 aa12.69□□□□□ -0.38
C9orf47-203ENST00000375851 CTDSP2O14595 271 aa12.69□□□□□ -0.38
C9orf47-203ENST00000375851 SCRG1O75711 98 aa12.69□□□□□ -0.38
C9orf47-203ENST00000375851 SLC35E2P0CK97 266 aa12.69□□□□□ -0.38
C9orf47-203ENST00000375851 GNRHRP30968 328 aa12.69□□□□□ -0.38
C9orf47-203ENST00000375851 KIAA1024LP59773 190 aa12.69□□□□□ -0.38
C9orf47-203ENST00000375851 SQSTM1Q13501 440 aa12.69□□□□□ -0.38
C9orf47-203ENST00000375851 PLEKHN1Q494U1 663 aaPredicted RBP12.69□□□□□ -0.38
C9orf47-203ENST00000375851 MFSD12Q6NUT3 480 aa12.69□□□□□ -0.38
C9orf47-203ENST00000375851 LIMS2Q7Z4I7 341 aa12.69□□□□□ -0.38
C9orf47-203ENST00000375851 AGBL5Q8NDL9 886 aa12.69□□□□□ -0.38
C9orf47-203ENST00000375851 TREM1Q9NP99 234 aa12.69□□□□□ -0.38
C9orf47-203ENST00000375851 INPP5EQ9NRR6 644 aa12.69□□□□□ -0.38
C9orf47-203ENST00000375851 B3GNT3Q9Y2A9 372 aa12.69□□□□□ -0.38
C9orf47-203ENST00000375851 SLC16A6O15403 523 aa12.69□□□□□ -0.38
C9orf47-203ENST00000375851 PBX2P40425 430 aa12.69□□□□□ -0.38
C9orf47-203ENST00000375851 FNTBP49356 437 aa12.69□□□□□ -0.38
C9orf47-203ENST00000375851 SNU13P55769 128 aaKnown RBP12.69□□□□□ -0.38
C9orf47-203ENST00000375851 IL17RCQ8NAC3 791 aa12.69□□□□□ -0.38
C9orf47-203ENST00000375851 OR14A16Q8NHC5 309 aa12.69□□□□□ -0.38
C9orf47-203ENST00000375851 MUL1Q969V5 352 aa12.69□□□□□ -0.38
C9orf47-203ENST00000375851 TNFRSF13CQ96RJ3 184 aa12.69□□□□□ -0.38
C9orf47-203ENST00000375851 NT5DC2Q9H857 520 aa12.69□□□□□ -0.38
C9orf47-203ENST00000375851 PSORS1C1Q9UIG5 152 aa12.69□□□□□ -0.38
C9orf47-203ENST00000375851 SLC6A5Q9Y345 797 aa12.69□□□□□ -0.38
C9orf47-203ENST00000375851 LOXHD1Q8IVV2 1947 aa12.69□□□□□ -0.38
C9orf47-203ENST00000375851 RREB1Q92766 1687 aa12.69□□□□□ -0.38
C9orf47-203ENST00000375851 GGT3PA6NGU5 568 aa12.69□□□□□ -0.38
C9orf47-203ENST00000375851 SERINC4A6NH21 518 aa12.69□□□□□ -0.38
C9orf47-203ENST00000375851 ELAVL4P26378 380 aaKnown RBP12.69□□□□□ -0.38
C9orf47-203ENST00000375851 SLC19A1P41440 591 aa12.69□□□□□ -0.38
C9orf47-203ENST00000375851 RACK1P63244 317 aaKnown RBP12.69□□□□□ -0.38
C9orf47-203ENST00000375851 SLC6A19Q695T7 634 aa12.69□□□□□ -0.38
C9orf47-203ENST00000375851 TECPR1Q7Z6L1 1165 aa12.69□□□□□ -0.38
C9orf47-203ENST00000375851 COQ10AQ96MF6 247 aa12.69□□□□□ -0.38
C9orf47-203ENST00000375851 AMBRA1Q9C0C7 1298 aa12.69□□□□□ -0.38
C9orf47-203ENST00000375851 ZNF160Q9HCG1 818 aa12.69□□□□□ -0.38
C9orf47-203ENST00000375851 NSG1A0A0A6YYJ2 146 aa12.69□□□□□ -0.38
C9orf47-203ENST00000375851 BMP1P13497 986 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 844.5 ms