RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 CHST2Q9Y4C5 530 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 NOX1Q9Y5S8 564 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 AP1M2Q9Y6Q5 423 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 PROS1P07225 676 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 FBLP22087 321 aaKnown RBP6.11□□□□□ -1.43
SMC1A-202ENST00000375340 S100GP29377 79 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 AQP2P41181 271 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 RGS19P49795 217 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 HTRA3P83110 453 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 OR2S2Q9NQN1 319 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 BABAM2Q9NXR7 383 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 HS3ST2Q9Y278 367 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 CDC14CA4D256 554 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 A8MVJ9 347 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 C1QCP02747 245 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 OPN1LWP04000 364 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 HEXBP07686 556 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 AMY2BP19961 511 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 CFL1P23528 166 aaKnown RBP6.1□□□□□ -1.43
SMC1A-202ENST00000375340 DLSTP36957 453 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 MMP12P39900 470 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 RPL35P42766 123 aaKnown RBP6.1□□□□□ -1.43
SMC1A-202ENST00000375340 RAB2AP61019 212 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 INSL4Q14641 139 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 HENMT1Q5T8I9 393 aaKnown RBP6.1□□□□□ -1.43
SMC1A-202ENST00000375340 FAHD1Q6P587 224 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 ALKAL2Q6UX46 152 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 CYHR1Q6ZMK1 362 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 FCRLAQ7L513 359 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 C15orf40Q8WUR7 153 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 SLC25A44Q96H78 314 aaPredicted RBP6.1□□□□□ -1.43
SMC1A-202ENST00000375340 ZC3H10Q96K80 434 aaKnown RBP6.1□□□□□ -1.43
SMC1A-202ENST00000375340 MS4A8Q9BY19 250 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 PRRG4Q9BZD6 226 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 POLMQ9NP87 494 aaPredicted RBP6.1□□□□□ -1.43
SMC1A-202ENST00000375340 EPHA6Q9UF33 1036 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 KLK4Q9Y5K2 254 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 TEX13DA0A0J9YY54 714 aaPredicted RBP6.1□□□□□ -1.43
SMC1A-202ENST00000375340 ANTXRLA6NF34 631 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 CSF3P09919 207 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 FUT1P19526 365 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 CR2P20023 1033 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 SLC6A12P48065 614 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 ILKQ13418 452 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 SLC18B1Q6NT16 456 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 PDZD9Q8IXQ8 264 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 ACBD4Q8NC06 268 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 PSD2Q9BQI7 771 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 APOOQ9BUR5 198 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 CDCP1Q9H5V8 836 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 WSB2Q9NYS7 404 aaPredicted RBP6.1□□□□□ -1.43
SMC1A-202ENST00000375340 B3GALT1Q9Y5Z6 326 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 SCO1O75880 301 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 RIDAP52758 137 aaKnown RBP6.1□□□□□ -1.43
SMC1A-202ENST00000375340 SMAD2Q15796 467 aaKnown RBP6.1□□□□□ -1.43
SMC1A-202ENST00000375340 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.1□□□□□ -1.431e-7■■■■□ 20.5
SMC1A-202ENST00000375340 WDR45BQ5MNZ6 344 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 ACSM5Q6NUN0 579 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 ZNF283Q8N7M2 679 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 IL17RDQ8NFM7 739 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 STEAP2Q8NFT2 490 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 CMKLR1Q99788 373 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 ALOXE3Q9BYJ1 711 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 WRBO00258 174 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 POLR1CO15160 346 aaPredicted RBP6.1□□□□□ -1.43
SMC1A-202ENST00000375340 ZNF35P13682 527 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 HLA-DMAP28067 261 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 EMP3P54852 163 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 MC2RQ01718 297 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 METTL11BQ5VVY1 283 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 SLX4IPQ5VYV7 408 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 SHISA6Q6ZSJ9 500 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 SSX6Q7RTT6 188 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 LACC1Q8IV20 430 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 OR5T2Q8NGG2 359 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 BRIX1Q8TDN6 353 aaKnown RBP6.1□□□□□ -1.43
SMC1A-202ENST00000375340 ELP5Q8TE02 316 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 ZFPM2Q8WW38 1151 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 ZNF436Q9C0F3 470 aaPredicted RBP6.1□□□□□ -1.43
SMC1A-202ENST00000375340 SPNS1Q9H2V7 528 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 DKKL1Q9UK85 242 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 EDARQ9UNE0 448 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 MGAMO43451 1857 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 DCDC2BA2VCK2 349 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 GIPRP48546 466 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 MCCD1P59942 119 aaPredicted RBP6.1□□□□□ -1.43
SMC1A-202ENST00000375340 SORDQ00796 357 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 FABP5Q01469 135 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 TSPAN31Q12999 210 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 AIMP2Q13155 320 aaKnown RBP6.1□□□□□ -1.43
SMC1A-202ENST00000375340 RPE65Q16518 533 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 PHF19Q5T6S3 580 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 HBMQ6B0K9 141 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 FAAP20Q6NZ36 180 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 TMEM205Q6UW68 189 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 VASH1Q7L8A9 365 aaPredicted RBP6.1□□□□□ -1.43
SMC1A-202ENST00000375340 TMEM150AQ86TG1 271 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 ABHD4Q8TB40 342 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 DCUN1D4Q92564 292 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 CNOT9Q92600 299 aaKnown RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms