RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 BTBD17A6NE02 478 aa13.23□□□□□ -0.29
RAPGEF1-202ENST00000372190 RAB5AP20339 215 aa13.23□□□□□ -0.29
RAPGEF1-202ENST00000372190 SLC6A11P48066 632 aa13.23□□□□□ -0.29
RAPGEF1-202ENST00000372190 RBM39Q14498 530 aaKnown RBP13.23□□□□□ -0.29
RAPGEF1-202ENST00000372190 ZNF239Q16600 458 aaKnown RBP13.23□□□□□ -0.29
RAPGEF1-202ENST00000372190 ATPAF1Q5TC12 328 aaPredicted RBP13.23□□□□□ -0.29
RAPGEF1-202ENST00000372190 GPR155Q7Z3F1 870 aa13.23□□□□□ -0.29
RAPGEF1-202ENST00000372190 LMO3Q8TAP4 145 aa13.23□□□□□ -0.29
RAPGEF1-202ENST00000372190 SCARB1Q8WTV0 552 aa13.23□□□□□ -0.29
RAPGEF1-202ENST00000372190 VAMP8Q9BV40 100 aa13.23□□□□□ -0.29
RAPGEF1-202ENST00000372190 PARD6AQ9NPB6 346 aa13.23□□□□□ -0.29
RAPGEF1-202ENST00000372190 GALPQ9UBC7 116 aa13.23□□□□□ -0.29
RAPGEF1-202ENST00000372190 PCDHGA9Q9Y5G4 932 aaKnown RBP13.23□□□□□ -0.29
RAPGEF1-202ENST00000372190 LOC730098B7Z3J9 87 aa13.22□□□□□ -0.29
RAPGEF1-202ENST00000372190 TRIM77I1YAP6 450 aa13.22□□□□□ -0.29
RAPGEF1-202ENST00000372190 CHEK1O14757 476 aa13.22□□□□□ -0.29
RAPGEF1-202ENST00000372190 STSP08842 583 aa13.22□□□□□ -0.29
RAPGEF1-202ENST00000372190 MRPL3P09001 348 aaKnown RBP13.22□□□□□ -0.29
RAPGEF1-202ENST00000372190 S100A7AQ86SG5 101 aa13.22□□□□□ -0.29
RAPGEF1-202ENST00000372190 MFSD6LQ8IWD5 586 aa13.22□□□□□ -0.29
RAPGEF1-202ENST00000372190 CPXM2Q8N436 756 aa13.22□□□□□ -0.29
RAPGEF1-202ENST00000372190 MAFAQ8NHW3 353 aaPredicted RBP13.22□□□□□ -0.29
RAPGEF1-202ENST00000372190 ARHGDIGQ99819 225 aa13.22□□□□□ -0.29
RAPGEF1-202ENST00000372190 VSX1Q9NZR4 365 aaPredicted RBP13.22□□□□□ -0.29
RAPGEF1-202ENST00000372190 VAPAQ9P0L0 249 aa13.22□□□□□ -0.29
RAPGEF1-202ENST00000372190 ADAMTS6Q9UKP5 1117 aa13.22□□□□□ -0.29
RAPGEF1-202ENST00000372190 HBQ1P09105 142 aa13.22□□□□□ -0.29
RAPGEF1-202ENST00000372190 C8orf89P0DMQ9 161 aa13.22□□□□□ -0.29
RAPGEF1-202ENST00000372190 SORDQ00796 357 aa13.22□□□□□ -0.29
RAPGEF1-202ENST00000372190 C11orf91Q3C1V1 193 aa13.22□□□□□ -0.29
RAPGEF1-202ENST00000372190 OR2T11Q8NH01 316 aa13.22□□□□□ -0.29
RAPGEF1-202ENST00000372190 ZNF442Q9H7R0 627 aa13.22□□□□□ -0.29
RAPGEF1-202ENST00000372190 ANKRD36CQ5JPF3 1778 aa13.22□□□□□ -0.29
RAPGEF1-202ENST00000372190 OTX2P32243 289 aa13.22□□□□□ -0.29
RAPGEF1-202ENST00000372190 GDF5P43026 501 aa13.22□□□□□ -0.29
RAPGEF1-202ENST00000372190 IL13RA1P78552 427 aa13.22□□□□□ -0.29
RAPGEF1-202ENST00000372190 MRPS34P82930 218 aaKnown RBP13.22□□□□□ -0.29
RAPGEF1-202ENST00000372190 CAMK2BQ13554 666 aa13.22□□□□□ -0.29
RAPGEF1-202ENST00000372190 TCEAL1Q15170 157 aa13.22□□□□□ -0.29
RAPGEF1-202ENST00000372190 ZNF678Q5SXM1 525 aa13.22□□□□□ -0.29
RAPGEF1-202ENST00000372190 SLC27A4Q6P1M0 643 aa13.22□□□□□ -0.29
RAPGEF1-202ENST00000372190 UBE2ZQ9H832 354 aaPredicted RBP13.22□□□□□ -0.29
RAPGEF1-202ENST00000372190 NOX3Q9HBY0 568 aa13.22□□□□□ -0.29
RAPGEF1-202ENST00000372190 ENPP5Q9UJA9 477 aa13.22□□□□□ -0.29
RAPGEF1-202ENST00000372190 NAALAD2Q9Y3Q0 740 aa13.22□□□□□ -0.29
RAPGEF1-202ENST00000372190 TRAV18A0A075B6X5 111 aa13.22□□□□□ -0.29
RAPGEF1-202ENST00000372190 H3BNC9 293 aa13.22□□□□□ -0.29
RAPGEF1-202ENST00000372190 ERVK-16P61578 105 aa13.22□□□□□ -0.29
RAPGEF1-202ENST00000372190 RPL24P83731 157 aaKnown RBP13.22□□□□□ -0.29
RAPGEF1-202ENST00000372190 SCAPQ12770 1279 aa13.22□□□□□ -0.29
RAPGEF1-202ENST00000372190 SLC51BQ86UW2 128 aa13.22□□□□□ -0.29
RAPGEF1-202ENST00000372190 KLBQ86Z14 1044 aa13.22□□□□□ -0.29
RAPGEF1-202ENST00000372190 IGDCC3Q8IVU1 814 aa13.22□□□□□ -0.29
RAPGEF1-202ENST00000372190 OR8J1Q8NGP2 316 aa13.22□□□□□ -0.29
RAPGEF1-202ENST00000372190 MRGPRX2Q96LB1 330 aa13.22□□□□□ -0.29
RAPGEF1-202ENST00000372190 NOL4LQ96MY1 436 aaPredicted RBP13.22□□□□□ -0.29
RAPGEF1-202ENST00000372190 RTP3Q9BQQ7 232 aa13.22□□□□□ -0.29
RAPGEF1-202ENST00000372190 C2orf72A6NCS6 295 aa13.22□□□□□ -0.29
RAPGEF1-202ENST00000372190 MPC1LP0DKB6 136 aa13.22□□□□□ -0.29
RAPGEF1-202ENST00000372190 HOXD11P31277 338 aaPredicted RBP13.22□□□□□ -0.29
RAPGEF1-202ENST00000372190 EMX2Q04743 252 aa13.22□□□□□ -0.29
RAPGEF1-202ENST00000372190 CES4AQ5XG92 561 aa13.22□□□□□ -0.29
RAPGEF1-202ENST00000372190 PM20D1Q6GTS8 502 aa13.22□□□□□ -0.29
RAPGEF1-202ENST00000372190 PPP1R3BQ86XI6 285 aa13.22□□□□□ -0.29
RAPGEF1-202ENST00000372190 FRMD1Q8N878 549 aa13.22□□□□□ -0.29
RAPGEF1-202ENST00000372190 DUSP23Q9BVJ7 150 aa13.22□□□□□ -0.29
RAPGEF1-202ENST00000372190 OR51B5Q9H339 312 aa13.22□□□□□ -0.29
RAPGEF1-202ENST00000372190 TMEM14AQ9Y6G1 99 aa13.22□□□□□ -0.29
RAPGEF1-202ENST00000372190 CDC123O75794 336 aaPredicted RBP13.21□□□□□ -0.29
RAPGEF1-202ENST00000372190 SPI1P17947 270 aa13.21□□□□□ -0.29
RAPGEF1-202ENST00000372190 LIMK1P53667 647 aa13.21□□□□□ -0.29
RAPGEF1-202ENST00000372190 B3GNT7Q8NFL0 401 aa13.21□□□□□ -0.29
RAPGEF1-202ENST00000372190 RLN3Q8WXF3 142 aa13.21□□□□□ -0.29
RAPGEF1-202ENST00000372190 NXPE3Q969Y0 559 aa13.21□□□□□ -0.29
RAPGEF1-202ENST00000372190 KCNIP1Q9NZI2 227 aa13.21□□□□□ -0.29
RAPGEF1-202ENST00000372190 MYH8P13535 1937 aa13.21□□□□□ -0.29
RAPGEF1-202ENST00000372190 SLC31A2O15432 143 aa13.21□□□□□ -0.29
RAPGEF1-202ENST00000372190 MEF2AQ02078 507 aaPredicted RBP13.21□□□□□ -0.29
RAPGEF1-202ENST00000372190 PCBP2Q15366 365 aaKnown RBP eCLIP13.21□□□□□ -0.299e-12■□□□□ 8.6
RAPGEF1-202ENST00000372190 CYBRD1Q53TN4 286 aa13.21□□□□□ -0.29
RAPGEF1-202ENST00000372190 LCN10Q6JVE6 187 aa13.21□□□□□ -0.29
RAPGEF1-202ENST00000372190 SCD5Q86SK9 330 aa13.21□□□□□ -0.29
RAPGEF1-202ENST00000372190 C2CD4AQ8NCU7 369 aaPredicted RBP13.21□□□□□ -0.29
RAPGEF1-202ENST00000372190 FIZ1Q96SL8 496 aa13.21□□□□□ -0.29
RAPGEF1-202ENST00000372190 FAM103A1Q9BTL3 118 aaKnown RBP13.21□□□□□ -0.29
RAPGEF1-202ENST00000372190 MROQ9BYG7 248 aa13.21□□□□□ -0.29
RAPGEF1-202ENST00000372190 DEFB126Q9BYW3 111 aa13.21□□□□□ -0.29
RAPGEF1-202ENST00000372190 CD244Q9BZW8 370 aa13.21□□□□□ -0.29
RAPGEF1-202ENST00000372190 ZNF331Q9NQX6 463 aaPredicted RBP13.21□□□□□ -0.29
RAPGEF1-202ENST00000372190 SLC35D1Q9NTN3 355 aa13.21□□□□□ -0.29
RAPGEF1-202ENST00000372190 TJP1Q07157 1748 aa13.21□□□□□ -0.29
RAPGEF1-202ENST00000372190 FAAHO00519 579 aa13.21□□□□□ -0.29
RAPGEF1-202ENST00000372190 TP53I11O14683 189 aa13.21□□□□□ -0.29
RAPGEF1-202ENST00000372190 TRHRP34981 398 aaPredicted RBP13.21□□□□□ -0.29
RAPGEF1-202ENST00000372190 TSFMP43897 325 aaKnown RBP13.21□□□□□ -0.29
RAPGEF1-202ENST00000372190 UBE2G2P60604 165 aa13.21□□□□□ -0.29
RAPGEF1-202ENST00000372190 TNFRSF17Q02223 184 aa13.21□□□□□ -0.29
RAPGEF1-202ENST00000372190 ZBTB44Q8NCP5 570 aa13.21□□□□□ -0.29
RAPGEF1-202ENST00000372190 KCNA7Q96RP8 456 aa13.21□□□□□ -0.29
RAPGEF1-202ENST00000372190 APOOQ9BUR5 198 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms