RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 TFPTP0C1Z6 253 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 OR12D1P0DN82 309 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 ACP2P11117 423 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 MATN1P21941 496 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 PPIBP23284 216 aaKnown RBP3.27□□□□□ -1.89
MCF2-202ENST00000370573 GCH1P30793 250 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 MAP3K8P41279 467 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 EMDP50402 254 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 CRYBA2P53672 197 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 SH3BGRP55822 239 aaPredicted RBP3.27□□□□□ -1.89
MCF2-202ENST00000370573 OCA2Q04671 838 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 FUT5Q11128 374 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 FUT7Q11130 342 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 EIF3IQ13347 325 aaKnown RBP3.27□□□□□ -1.89
MCF2-202ENST00000370573 SERTAD2Q14140 314 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 IRF3Q14653 427 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 LASP1Q14847 261 aaKnown RBP3.27□□□□□ -1.89
MCF2-202ENST00000370573 GCNT6Q5T4J0 391 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 GLYATQ6IB77 296 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 MFSD12Q6NUT3 480 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 KLHL24Q6TFL4 600 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 ANGPTL8Q6UXH0 198 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 LANCL3Q6ZV70 420 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 GALNT10Q86SR1 603 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 SERPINA11Q86U17 422 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 TMPRSS12Q86WS5 348 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 ZNF615Q8N8J6 731 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 OR52R1Q8NGF1 315 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 OR56A1Q8NGH5 318 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 OR5D16Q8NGK9 328 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 FBXO30Q8TB52 745 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 TMEM171Q8WVE6 324 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 ADAMTS14Q8WXS8 1223 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 LZICQ8WZA0 190 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 GCDHQ92947 438 aaPredicted RBP3.27□□□□□ -1.89
MCF2-202ENST00000370573 RIT1Q92963 219 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 ASB9Q96DX5 294 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 RBM18Q96H35 190 aaKnown RBP3.27□□□□□ -1.89
MCF2-202ENST00000370573 SENP5Q96HI0 755 aaPredicted RBP3.27□□□□□ -1.89
MCF2-202ENST00000370573 SLC35G5Q96KT7 338 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 DGAT2Q96PD7 388 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 GPHA2Q96T91 129 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 PIP5K1AQ99755 562 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 ZPBPQ9BS86 351 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 OR51I1Q9H343 314 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 C3orf14Q9HBI5 128 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 EQTNQ9NQ60 294 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 ACTR3BQ9P1U1 418 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 PTGFRNQ9P2B2 879 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 DNAJB11Q9UBS4 358 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 DTX4Q9Y2E6 619 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 AP3M1Q9Y2T2 418 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 SPTBN2O15020 2390 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 WDFY3Q8IZQ1 3526 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 SPTBN4Q9H254 2564 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 TCRBV3S1A0A5B6 114 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 AGAP5A6NIR3 686 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 H3BNX3 289 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 CXCR6O00574 342 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 PRKNO60260 465 aaPredicted RBP3.26□□□□□ -1.89
MCF2-202ENST00000370573 ALOX12BO75342 701 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 CREG1O75629 220 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 KRT36O76013 467 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 IFNA16P05015 189 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 KLK3P07288 261 aaPredicted RBP3.26□□□□□ -1.89
MCF2-202ENST00000370573 HEXBP07686 556 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 UMODP07911 640 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 IFI6P09912 130 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 TNNI3P19429 210 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 F8A1P23610 371 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 PCGF2P35227 344 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 GPR143P51810 404 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 PGDP52209 483 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 EMP2P54851 167 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 DSTNP60981 165 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 BNIP2Q12982 314 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 FADDQ13158 208 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 BIKQ13323 160 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 FLOT2Q14254 428 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 NSDHLQ15738 373 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 SYPL1Q16563 259 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 DUSP5Q16690 384 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 CYP51A1Q16850 503 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 SFT2D3Q587I9 215 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 LCN8Q6JVE9 175 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 CYB5D1Q6P9G0 228 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 TMEM205Q6UW68 189 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 ANKRD37Q7Z713 158 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 DHFR2Q86XF0 187 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 FAM86B1Q8N7N1 296 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 ANKFN1Q8N957 763 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 SLC16A11Q8NCK7 471 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 NFAM1Q8NET5 270 aaPredicted RBP3.26□□□□□ -1.89
MCF2-202ENST00000370573 NLGN4YQ8NFZ3 816 aaPredicted RBP3.26□□□□□ -1.89
MCF2-202ENST00000370573 OR10Q1Q8NGQ4 319 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 TBC1D15Q8TC07 691 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 ZNF721Q8TF20 911 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 CT55Q8WUE5 264 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 SLC38A5Q8WUX1 472 aa3.26□□□□□ -1.89
MCF2-202ENST00000370573 XAGE5Q8WWM1 108 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms