RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 ANKRD30BLA7E2S9 258 aa11.72□□□□□ -0.53
HCFC1-202ENST00000369984 CA12O43570 354 aa11.72□□□□□ -0.53
HCFC1-202ENST00000369984 KITLGP21583 273 aa11.72□□□□□ -0.53
HCFC1-202ENST00000369984 TRIM23P36406 574 aa11.72□□□□□ -0.53
HCFC1-202ENST00000369984 CNN3Q15417 329 aaKnown RBP11.72□□□□□ -0.53
HCFC1-202ENST00000369984 GPR19Q15760 415 aa11.72□□□□□ -0.53
HCFC1-202ENST00000369984 MEX3DQ86XN8 651 aaKnown RBP11.72□□□□□ -0.53
HCFC1-202ENST00000369984 ZNF701M0R085 212 aaPredicted RBP11.72□□□□□ -0.53
HCFC1-202ENST00000369984 IL1RNP18510 177 aa11.72□□□□□ -0.53
HCFC1-202ENST00000369984 SERPINA2P20848 420 aa11.72□□□□□ -0.53
HCFC1-202ENST00000369984 SLC6A8P48029 635 aa11.72□□□□□ -0.53
HCFC1-202ENST00000369984 TATDN3Q17R31 274 aa11.72□□□□□ -0.53
HCFC1-202ENST00000369984 HYAL4Q2M3T9 481 aa11.72□□□□□ -0.53
HCFC1-202ENST00000369984 FAM58AQ8N1B3 248 aa11.72□□□□□ -0.53
HCFC1-202ENST00000369984 ZBTB8AQ96BR9 441 aa11.72□□□□□ -0.53
HCFC1-202ENST00000369984 CCNL2Q96S94 520 aaPredicted RBP11.72□□□□□ -0.53
HCFC1-202ENST00000369984 KCNIP2Q9NS61 270 aa11.72□□□□□ -0.53
HCFC1-202ENST00000369984 CHD5Q8TDI0 1954 aa11.72□□□□□ -0.53
HCFC1-202ENST00000369984 SLC31A2O15432 143 aa11.72□□□□□ -0.53
HCFC1-202ENST00000369984 LILRB3O75022 631 aa11.72□□□□□ -0.53
HCFC1-202ENST00000369984 RPL7P18124 248 aaKnown RBP11.72□□□□□ -0.53
HCFC1-202ENST00000369984 BIDP55957 195 aa11.72□□□□□ -0.53
HCFC1-202ENST00000369984 CXCR4P61073 352 aa11.72□□□□□ -0.53
HCFC1-202ENST00000369984 RING1Q06587 406 aa11.72□□□□□ -0.53
HCFC1-202ENST00000369984 ACSM3Q53FZ2 586 aa11.72□□□□□ -0.53
HCFC1-202ENST00000369984 LETMD1Q6P1Q0 360 aa11.72□□□□□ -0.53
HCFC1-202ENST00000369984 HORMAD2Q8N7B1 307 aa11.72□□□□□ -0.53
HCFC1-202ENST00000369984 SDR9C7Q8NEX9 313 aa11.72□□□□□ -0.53
HCFC1-202ENST00000369984 OR6F1Q8NGZ6 308 aa11.72□□□□□ -0.53
HCFC1-202ENST00000369984 ACOT11Q8WXI4 607 aaPredicted RBP11.72□□□□□ -0.53
HCFC1-202ENST00000369984 MIB2Q96AX9 1013 aa11.72□□□□□ -0.53
HCFC1-202ENST00000369984 KCMF1Q9P0J7 381 aa11.72□□□□□ -0.53
HCFC1-202ENST00000369984 TGM5O43548 720 aa11.72□□□□□ -0.53
HCFC1-202ENST00000369984 ONECUT3O60422 494 aaPredicted RBP11.72□□□□□ -0.53
HCFC1-202ENST00000369984 FAM189BP81408 668 aa11.72□□□□□ -0.53
HCFC1-202ENST00000369984 NOX3Q9HBY0 568 aa11.72□□□□□ -0.53
HCFC1-202ENST00000369984 SIX4Q9UIU6 781 aa11.72□□□□□ -0.53
HCFC1-202ENST00000369984 RELAQ04206 551 aa11.72□□□□□ -0.53
HCFC1-202ENST00000369984 DBPQ10586 325 aaPredicted RBP11.72□□□□□ -0.53
HCFC1-202ENST00000369984 C19orf35Q6ZS72 473 aa11.72□□□□□ -0.53
HCFC1-202ENST00000369984 STEAP2Q8NFT2 490 aa11.72□□□□□ -0.53
HCFC1-202ENST00000369984 ZFAND1Q8TCF1 268 aa11.72□□□□□ -0.53
HCFC1-202ENST00000369984 BRIX1Q8TDN6 353 aaKnown RBP11.72□□□□□ -0.53
HCFC1-202ENST00000369984 SERINC2Q96SA4 455 aa11.72□□□□□ -0.53
HCFC1-202ENST00000369984 A0A1B0GUL6 1792 aa11.72□□□□□ -0.53
HCFC1-202ENST00000369984 A0A1W2PQU0 124 aa11.72□□□□□ -0.53
HCFC1-202ENST00000369984 GAPDHSO14556 408 aaPredicted RBP11.72□□□□□ -0.53
HCFC1-202ENST00000369984 NPC1O15118 1278 aa11.72□□□□□ -0.53
HCFC1-202ENST00000369984 DPM1O60762 260 aa11.72□□□□□ -0.53
HCFC1-202ENST00000369984 RPS18P62269 152 aaKnown RBP11.72□□□□□ -0.53
HCFC1-202ENST00000369984 ZNF542PQ5EBM4 170 aa11.72□□□□□ -0.53
HCFC1-202ENST00000369984 ZNF551Q7Z340 670 aaPredicted RBP11.72□□□□□ -0.53
HCFC1-202ENST00000369984 ABHD12BQ7Z5M8 362 aaPredicted RBP11.72□□□□□ -0.53
HCFC1-202ENST00000369984 ZNF596Q8TC21 504 aa11.72□□□□□ -0.53
HCFC1-202ENST00000369984 NICN1Q9BSH3 213 aa11.72□□□□□ -0.53
HCFC1-202ENST00000369984 CEBPZOSA8MTT3 80 aa11.71□□□□□ -0.53
HCFC1-202ENST00000369984 B4DXG7 233 aa11.71□□□□□ -0.53
HCFC1-202ENST00000369984 DBHP09172 617 aa11.71□□□□□ -0.53
HCFC1-202ENST00000369984 PSMB10P40306 273 aa11.71□□□□□ -0.53
HCFC1-202ENST00000369984 EFNA3P52797 238 aa11.71□□□□□ -0.53
HCFC1-202ENST00000369984 Q9Y3F1 56 aa11.71□□□□□ -0.53
HCFC1-202ENST00000369984 IER3IP1Q9Y5U9 82 aa11.71□□□□□ -0.53
HCFC1-202ENST00000369984 B4GAT1O43505 415 aa11.71□□□□□ -0.53
HCFC1-202ENST00000369984 GCH1P30793 250 aa11.71□□□□□ -0.53
HCFC1-202ENST00000369984 OR7A5Q15622 319 aa11.71□□□□□ -0.53
HCFC1-202ENST00000369984 CDONQ4KMG0 1287 aa11.71□□□□□ -0.53
HCFC1-202ENST00000369984 MRPL22Q9NWU5 206 aaKnown RBP11.71□□□□□ -0.53
HCFC1-202ENST00000369984 RBPJLQ9UBG7 517 aa11.71□□□□□ -0.53
HCFC1-202ENST00000369984 V9GY05 133 aa11.71□□□□□ -0.53
HCFC1-202ENST00000369984 RNASET2O00584 256 aaKnown RBP11.71□□□□□ -0.53
HCFC1-202ENST00000369984 RD3LP0DJH9 198 aa11.71□□□□□ -0.53
HCFC1-202ENST00000369984 TAS2R19P59542 299 aa11.71□□□□□ -0.53
HCFC1-202ENST00000369984 GK3PQ14409 553 aa11.71□□□□□ -0.53
HCFC1-202ENST00000369984 TMEM201Q5SNT2 666 aa11.71□□□□□ -0.53
HCFC1-202ENST00000369984 SLX4IPQ5VYV7 408 aa11.71□□□□□ -0.53
HCFC1-202ENST00000369984 HEPHL1Q6MZM0 1159 aa11.71□□□□□ -0.53
HCFC1-202ENST00000369984 MKRN2Q9H000 416 aaKnown RBP11.71□□□□□ -0.53
HCFC1-202ENST00000369984 RNF32Q9H0A6 362 aa11.71□□□□□ -0.53
HCFC1-202ENST00000369984 SPATA6Q9NWH7 488 aaPredicted RBP11.71□□□□□ -0.53
HCFC1-202ENST00000369984 EHFQ9NZC4 300 aa11.71□□□□□ -0.53
HCFC1-202ENST00000369984 TRPM6Q9BX84 2022 aa11.71□□□□□ -0.53
HCFC1-202ENST00000369984 UBE2KP61086 200 aa11.71□□□□□ -0.53
HCFC1-202ENST00000369984 PDLIM3Q53GG5 364 aaPredicted RBP11.71□□□□□ -0.53
HCFC1-202ENST00000369984 ZNF691Q5VV52 312 aa11.71□□□□□ -0.53
HCFC1-202ENST00000369984 RTL6Q6ICC9 239 aa11.71□□□□□ -0.53
HCFC1-202ENST00000369984 CDHR3Q6ZTQ4 885 aa11.71□□□□□ -0.53
HCFC1-202ENST00000369984 ESPNLQ6ZVH7 1005 aa11.71□□□□□ -0.53
HCFC1-202ENST00000369984 DTWD1Q8N5C7 304 aa11.71□□□□□ -0.53
HCFC1-202ENST00000369984 PRR11Q96HE9 360 aaPredicted RBP11.71□□□□□ -0.53
HCFC1-202ENST00000369984 BTF3L4Q96K17 158 aa11.71□□□□□ -0.53
HCFC1-202ENST00000369984 MBP02144 154 aa11.71□□□□□ -0.54
HCFC1-202ENST00000369984 ZNF92Q03936 586 aa11.71□□□□□ -0.54
HCFC1-202ENST00000369984 GINS3Q9BRX5 216 aa11.71□□□□□ -0.54
HCFC1-202ENST00000369984 POLHQ9Y253 713 aa11.71□□□□□ -0.54
HCFC1-202ENST00000369984 RASD1Q9Y272 281 aa11.71□□□□□ -0.54
HCFC1-202ENST00000369984 AKAP11Q9UKA4 1901 aa11.71□□□□□ -0.54
HCFC1-202ENST00000369984 LOC102725191A0A1B0GVB3 256 aa11.71□□□□□ -0.54
HCFC1-202ENST00000369984 TP53P04637 393 aaPredicted RBP11.71□□□□□ -0.54
HCFC1-202ENST00000369984 G0S2P27469 103 aa11.71□□□□□ -0.54
HCFC1-202ENST00000369984 CLDN6P56747 220 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms