RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 OR52E4Q8NGH9 312 aa12.57□□□□□ -0.4
TPM3-211ENST00000368531 OR4D11Q8NGI4 311 aa12.57□□□□□ -0.4
TPM3-211ENST00000368531 OR5M9Q8NGP3 310 aa12.57□□□□□ -0.4
TPM3-211ENST00000368531 RNF217Q8TC41 542 aa12.57□□□□□ -0.4
TPM3-211ENST00000368531 ZBTB8AQ96BR9 441 aa12.57□□□□□ -0.4
TPM3-211ENST00000368531 ARHGDIGQ99819 225 aa12.57□□□□□ -0.4
TPM3-211ENST00000368531 PIGQQ9BRB3 760 aa12.57□□□□□ -0.4
TPM3-211ENST00000368531 UGT2B28Q9BY64 529 aa12.57□□□□□ -0.4
TPM3-211ENST00000368531 TMEM185BQ9H7F4 350 aa12.57□□□□□ -0.4
TPM3-211ENST00000368531 PLSCR2Q9NRY7 297 aa12.57□□□□□ -0.4
TPM3-211ENST00000368531 ACER3Q9NUN7 267 aa12.57□□□□□ -0.4
TPM3-211ENST00000368531 SH3BGRL2Q9UJC5 107 aa12.57□□□□□ -0.4
TPM3-211ENST00000368531 RPS6KA6Q9UK32 745 aa12.57□□□□□ -0.4
TPM3-211ENST00000368531 IGSF10Q6WRI0 2623 aa12.57□□□□□ -0.4
TPM3-211ENST00000368531 A0A1B0GVC2 190 aa12.56□□□□□ -0.4
TPM3-211ENST00000368531 TMEM229AB2RXF0 380 aa12.56□□□□□ -0.4
TPM3-211ENST00000368531 SEC14L5O43304 696 aa12.56□□□□□ -0.4
TPM3-211ENST00000368531 C8BP07358 591 aa12.56□□□□□ -0.4
TPM3-211ENST00000368531 IL11P20809 199 aa12.56□□□□□ -0.4
TPM3-211ENST00000368531 GNLYP22749 145 aa12.56□□□□□ -0.4
TPM3-211ENST00000368531 HTR2AP28223 471 aa12.56□□□□□ -0.4
TPM3-211ENST00000368531 GFRA1P56159 465 aa12.56□□□□□ -0.4
TPM3-211ENST00000368531 RBPJQ06330 500 aa12.56□□□□□ -0.4
TPM3-211ENST00000368531 CRYZQ08257 329 aaKnown RBP12.56□□□□□ -0.4
TPM3-211ENST00000368531 TRIM25Q14258 630 aaKnown RBP12.56□□□□□ -0.4
TPM3-211ENST00000368531 NRF1Q16656 503 aa12.56□□□□□ -0.4
TPM3-211ENST00000368531 TMEM44Q2T9K0 475 aa12.56□□□□□ -0.4
TPM3-211ENST00000368531 ENPP6Q6UWR7 440 aa12.56□□□□□ -0.4
TPM3-211ENST00000368531 DEF8Q6ZN54 512 aa12.56□□□□□ -0.4
TPM3-211ENST00000368531 PLEKHM3Q6ZWE6 761 aa12.56□□□□□ -0.4
TPM3-211ENST00000368531 ATCAYQ86WG3 371 aa12.56□□□□□ -0.4
TPM3-211ENST00000368531 DHFR2Q86XF0 187 aa12.56□□□□□ -0.4
TPM3-211ENST00000368531 CHERPQ8IWX8 916 aaKnown RBP12.56□□□□□ -0.4
TPM3-211ENST00000368531 ULK2Q8IYT8 1036 aa12.56□□□□□ -0.4
TPM3-211ENST00000368531 GTPBP8Q8N3Z3 284 aaPredicted RBP12.56□□□□□ -0.4
TPM3-211ENST00000368531 OR6T1Q8NGN1 323 aa12.56□□□□□ -0.4
TPM3-211ENST00000368531 ST8SIA1Q92185 356 aa12.56□□□□□ -0.4
TPM3-211ENST00000368531 SARAFQ96BY9 339 aa12.56□□□□□ -0.4
TPM3-211ENST00000368531 HSH2DQ96JZ2 352 aa12.56□□□□□ -0.4
TPM3-211ENST00000368531 MRGPRX4Q96LA9 322 aa12.56□□□□□ -0.4
TPM3-211ENST00000368531 MCHR1Q99705 422 aa12.56□□□□□ -0.4
TPM3-211ENST00000368531 TIMP4Q99727 224 aa12.56□□□□□ -0.4
TPM3-211ENST00000368531 GORASP2Q9H8Y8 452 aa12.56□□□□□ -0.4
TPM3-211ENST00000368531 DCAF13Q9NV06 445 aaKnown RBP12.56□□□□□ -0.4
TPM3-211ENST00000368531 RPS6KB2Q9UBS0 482 aa12.56□□□□□ -0.4
TPM3-211ENST00000368531 CAMK2AQ9UQM7 478 aa12.56□□□□□ -0.4
TPM3-211ENST00000368531 OSGIN2Q9Y236 505 aa12.56□□□□□ -0.4
TPM3-211ENST00000368531 SLC9A8Q9Y2E8 581 aa12.56□□□□□ -0.4
TPM3-211ENST00000368531 BOD1L1Q8NFC6 3051 aa12.56□□□□□ -0.4
TPM3-211ENST00000368531 TLN1Q9Y490 2541 aaKnown RBP12.55□□□□□ -0.4
TPM3-211ENST00000368531 CPSF4LA6NMK7 179 aaKnown RBP12.55□□□□□ -0.4
TPM3-211ENST00000368531 EFNA2O43921 213 aa12.55□□□□□ -0.4
TPM3-211ENST00000368531 TPST2O60704 377 aa12.55□□□□□ -0.4
TPM3-211ENST00000368531 PRKD3O94806 890 aa12.55□□□□□ -0.4
TPM3-211ENST00000368531 STAMBPO95630 424 aa12.55□□□□□ -0.4
TPM3-211ENST00000368531 ACTL6AO96019 429 aa12.55□□□□□ -0.4
TPM3-211ENST00000368531 POU3F2P20265 443 aaPredicted RBP12.55□□□□□ -0.4
TPM3-211ENST00000368531 ATP6V1B2P21281 511 aa12.55□□□□□ -0.4
TPM3-211ENST00000368531 CHMP24386 653 aa12.55□□□□□ -0.4
TPM3-211ENST00000368531 PSMA4P25789 261 aaKnown RBP12.55□□□□□ -0.4
TPM3-211ENST00000368531 TACR3P29371 465 aa12.55□□□□□ -0.4
TPM3-211ENST00000368531 SFTPDP35247 375 aa12.55□□□□□ -0.4
TPM3-211ENST00000368531 EIF1P41567 113 aaKnown RBP12.55□□□□□ -0.4
TPM3-211ENST00000368531 UQCRFS1P47985 274 aa12.55□□□□□ -0.4
TPM3-211ENST00000368531 NPTX1Q15818 432 aa12.55□□□□□ -0.4
TPM3-211ENST00000368531 FXNQ16595 210 aa12.55□□□□□ -0.4
TPM3-211ENST00000368531 EIF2S3LQ2VIR3 472 aaKnown RBP12.55□□□□□ -0.4
TPM3-211ENST00000368531 IFI44LQ53G44 452 aa12.55□□□□□ -0.4
TPM3-211ENST00000368531 WLSQ5T9L3 541 aa12.55□□□□□ -0.4
TPM3-211ENST00000368531 VASNQ6EMK4 673 aa12.55□□□□□ -0.4
TPM3-211ENST00000368531 WBP2NLQ6ICG8 309 aa12.55□□□□□ -0.4
TPM3-211ENST00000368531 ZNF585AQ6P3V2 769 aa12.55□□□□□ -0.4
TPM3-211ENST00000368531 PGM2L1Q6PCE3 622 aa12.55□□□□□ -0.4
TPM3-211ENST00000368531 GRINAQ7Z429 371 aa12.55□□□□□ -0.4
TPM3-211ENST00000368531 CD163Q86VB7 1156 aa12.55□□□□□ -0.4
TPM3-211ENST00000368531 RANBP3LQ86VV4 465 aaPredicted RBP12.55□□□□□ -0.4
TPM3-211ENST00000368531 FAM86B1Q8N7N1 296 aa12.55□□□□□ -0.4
TPM3-211ENST00000368531 PRR7Q8TB68 274 aa12.55□□□□□ -0.4
TPM3-211ENST00000368531 DNAJA3Q96EY1 480 aa12.55□□□□□ -0.4
TPM3-211ENST00000368531 LRGUKQ96M69 825 aa12.55□□□□□ -0.4
TPM3-211ENST00000368531 ZNF559Q9BR84 538 aa12.55□□□□□ -0.4
TPM3-211ENST00000368531 LRMDAQ9H2I8 198 aa12.55□□□□□ -0.4
TPM3-211ENST00000368531 TMEM27Q9HBJ8 222 aa12.55□□□□□ -0.4
TPM3-211ENST00000368531 PNPLA3Q9NST1 481 aa12.55□□□□□ -0.4
TPM3-211ENST00000368531 ACTR3BQ9P1U1 418 aa12.55□□□□□ -0.4
TPM3-211ENST00000368531 TMED7-TICAM2A0A0A6YYA0 188 aa12.54□□□□□ -0.4
TPM3-211ENST00000368531 C7orf72A4D263 438 aa12.54□□□□□ -0.4
TPM3-211ENST00000368531 OR14I1A6ND48 311 aa12.54□□□□□ -0.4
TPM3-211ENST00000368531 H0YC42 278 aa12.54□□□□□ -0.4
TPM3-211ENST00000368531 FAAHO00519 579 aa12.54□□□□□ -0.4
TPM3-211ENST00000368531 SLC19A2O60779 497 aa12.54□□□□□ -0.4
TPM3-211ENST00000368531 NTN1O95631 604 aa12.54□□□□□ -0.4
TPM3-211ENST00000368531 TFPIP10646 304 aa12.54□□□□□ -0.4
TPM3-211ENST00000368531 ZNF17P17021 662 aa12.54□□□□□ -0.4
TPM3-211ENST00000368531 SHC1P29353 583 aa12.54□□□□□ -0.4
TPM3-211ENST00000368531 SLC1A3P43003 542 aa12.54□□□□□ -0.4
TPM3-211ENST00000368531 YAP1P46937 504 aaKnown RBP12.54□□□□□ -0.4
TPM3-211ENST00000368531 LHX2P50458 406 aa12.54□□□□□ -0.4
TPM3-211ENST00000368531 ERFP50548 548 aa12.54□□□□□ -0.4
TPM3-211ENST00000368531 POLR2HP52434 150 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms