RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 SNPHO15079 494 aa18.78■□□□□ 0.6
SHISA4-201ENST00000362011 THRBP10828 461 aa18.78■□□□□ 0.6
SHISA4-201ENST00000362011 CNR1P21554 472 aa18.78■□□□□ 0.6
SHISA4-201ENST00000362011 PEX2P28328 305 aa18.78■□□□□ 0.6
SHISA4-201ENST00000362011 IDH2P48735 452 aaKnown RBP18.78■□□□□ 0.6
SHISA4-201ENST00000362011 MASP1P48740 699 aa18.78■□□□□ 0.6
SHISA4-201ENST00000362011 ARHGDIAP52565 204 aa18.78■□□□□ 0.6
SHISA4-201ENST00000362011 IST1P53990 364 aa18.78■□□□□ 0.6
SHISA4-201ENST00000362011 ARG2P78540 354 aa18.78■□□□□ 0.6
SHISA4-201ENST00000362011 TRAM2Q15035 370 aa18.78■□□□□ 0.6
SHISA4-201ENST00000362011 FGD3Q5JSP0 725 aa18.78■□□□□ 0.6
SHISA4-201ENST00000362011 LPCAT4Q643R3 524 aa18.78■□□□□ 0.6
SHISA4-201ENST00000362011 WBP2NLQ6ICG8 309 aa18.78■□□□□ 0.6
SHISA4-201ENST00000362011 SPINK14Q6IE38 97 aa18.78■□□□□ 0.6
SHISA4-201ENST00000362011 OR5M10Q6IEU7 315 aa18.78■□□□□ 0.6
SHISA4-201ENST00000362011 IGFL2Q6UWQ7 119 aa18.78■□□□□ 0.6
SHISA4-201ENST00000362011 GDF7Q7Z4P5 450 aa18.78■□□□□ 0.6
SHISA4-201ENST00000362011 PACS2Q86VP3 889 aa18.78■□□□□ 0.6
SHISA4-201ENST00000362011 CATSPER1Q8NEC5 780 aa18.78■□□□□ 0.6
SHISA4-201ENST00000362011 OR2M3Q8NG83 312 aa18.78■□□□□ 0.6
SHISA4-201ENST00000362011 EME1Q96AY2 570 aa18.78■□□□□ 0.6
SHISA4-201ENST00000362011 SDCCAG3Q96C92 435 aa18.78■□□□□ 0.6
SHISA4-201ENST00000362011 C9orf16Q9BUW7 83 aa18.78■□□□□ 0.6
SHISA4-201ENST00000362011 ANKRD19PQ9H560 264 aa18.78■□□□□ 0.6
SHISA4-201ENST00000362011 MED11Q9P086 117 aa18.78■□□□□ 0.6
SHISA4-201ENST00000362011 OAZ3Q9UMX2 235 aa18.78■□□□□ 0.6
SHISA4-201ENST00000362011 CNTRLQ7Z7A1 2325 aa18.78■□□□□ 0.6
SHISA4-201ENST00000362011 A0A1B0GWA3 101 aa18.77■□□□□ 0.6
SHISA4-201ENST00000362011 G3V2T6 193 aa18.77■□□□□ 0.6
SHISA4-201ENST00000362011 GNB5O14775 395 aa18.77■□□□□ 0.6
SHISA4-201ENST00000362011 SLC25A12O75746 678 aa18.77■□□□□ 0.6
SHISA4-201ENST00000362011 HMGA2P52926 109 aa18.77■□□□□ 0.6
SHISA4-201ENST00000362011 EXOC3L2Q2M3D2 409 aa18.77■□□□□ 0.6
SHISA4-201ENST00000362011 OGFRL1Q5TC84 451 aaPredicted RBP18.77■□□□□ 0.6
SHISA4-201ENST00000362011 SHQ1Q6PI26 577 aaKnown RBP18.77■□□□□ 0.6
SHISA4-201ENST00000362011 TMEM179BQ7Z7N9 219 aa18.77■□□□□ 0.6
SHISA4-201ENST00000362011 HIPK1Q86Z02 1210 aa18.77■□□□□ 0.6
SHISA4-201ENST00000362011 ZDHHC13Q8IUH4 622 aa18.77■□□□□ 0.6
SHISA4-201ENST00000362011 EPHX4Q8IUS5 362 aa18.77■□□□□ 0.6
SHISA4-201ENST00000362011 MDS2Q8NDY4 140 aa18.77■□□□□ 0.6
SHISA4-201ENST00000362011 OR4K17Q8NGC6 315 aa18.77■□□□□ 0.6
SHISA4-201ENST00000362011 OR4C15Q8NGM1 316 aa18.77■□□□□ 0.6
SHISA4-201ENST00000362011 OR52J3Q8NH60 311 aa18.77■□□□□ 0.6
SHISA4-201ENST00000362011 GPR119Q8TDV5 335 aa18.77■□□□□ 0.6
SHISA4-201ENST00000362011 NRG4Q8WWG1 115 aa18.77■□□□□ 0.6
SHISA4-201ENST00000362011 NRBF2Q96F24 287 aa18.77■□□□□ 0.6
SHISA4-201ENST00000362011 ZNF597Q96LX8 424 aa18.77■□□□□ 0.6
SHISA4-201ENST00000362011 ALPK1Q96QP1 1244 aa18.77■□□□□ 0.6
SHISA4-201ENST00000362011 SMAD5Q99717 465 aaKnown RBP18.77■□□□□ 0.6
SHISA4-201ENST00000362011 CIB1Q99828 191 aa18.77■□□□□ 0.6
SHISA4-201ENST00000362011 VCX3BQ9H321 246 aa18.77■□□□□ 0.6
SHISA4-201ENST00000362011 DSN1Q9H410 356 aa18.77■□□□□ 0.6
SHISA4-201ENST00000362011 TAS2R10Q9NYW0 307 aa18.77■□□□□ 0.6
SHISA4-201ENST00000362011 SELENONQ9NZV5 590 aa18.77■□□□□ 0.6
SHISA4-201ENST00000362011 TMCC3Q9ULS5 477 aa18.77■□□□□ 0.6
SHISA4-201ENST00000362011 SLC7A7Q9UM01 511 aa18.77■□□□□ 0.6
SHISA4-201ENST00000362011 HRH3Q9Y5N1 445 aa18.77■□□□□ 0.6
SHISA4-201ENST00000362011 A0A0B4J2E0 115 aa18.76■□□□□ 0.59
SHISA4-201ENST00000362011 A0A1B0GX12 115 aa18.76■□□□□ 0.59
SHISA4-201ENST00000362011 A0A1W2PRQ8 180 aa18.76■□□□□ 0.59
SHISA4-201ENST00000362011 G3V3Y1 287 aa18.76■□□□□ 0.59
SHISA4-201ENST00000362011 CHP2O43745 196 aa18.76■□□□□ 0.59
SHISA4-201ENST00000362011 GP1BBP13224 206 aa18.76■□□□□ 0.59
SHISA4-201ENST00000362011 ELAVL4P26378 380 aaKnown RBP18.76■□□□□ 0.59
SHISA4-201ENST00000362011 GCKP35557 465 aa18.76■□□□□ 0.59
SHISA4-201ENST00000362011 LIMS1P48059 325 aa18.76■□□□□ 0.59
SHISA4-201ENST00000362011 PTDSS1P48651 473 aaKnown RBP18.76■□□□□ 0.59
SHISA4-201ENST00000362011 DNASE1L1P49184 302 aa18.76■□□□□ 0.59
SHISA4-201ENST00000362011 TLE1Q04724 770 aa18.76■□□□□ 0.59
SHISA4-201ENST00000362011 FOXD4Q12950 439 aaPredicted RBP18.76■□□□□ 0.59
SHISA4-201ENST00000362011 DGCR6Q14129 220 aa18.76■□□□□ 0.59
SHISA4-201ENST00000362011 LRRC36Q1X8D7 754 aa18.76■□□□□ 0.59
SHISA4-201ENST00000362011 DCST1Q5T197 706 aa18.76■□□□□ 0.59
SHISA4-201ENST00000362011 BORAQ6PGQ7 559 aa18.76■□□□□ 0.59
SHISA4-201ENST00000362011 PLCZ1Q86YW0 608 aa18.76■□□□□ 0.59
SHISA4-201ENST00000362011 FADS6Q8N9I5 356 aa18.76■□□□□ 0.59
SHISA4-201ENST00000362011 OR1J4Q8NGS1 313 aa18.76■□□□□ 0.59
SHISA4-201ENST00000362011 RNF217Q8TC41 542 aa18.76■□□□□ 0.59
SHISA4-201ENST00000362011 DNAJA4Q8WW22 397 aaPredicted RBP18.76■□□□□ 0.59
SHISA4-201ENST00000362011 C5orf34Q96MH7 638 aa18.76■□□□□ 0.59
SHISA4-201ENST00000362011 KLHDC3Q9BQ90 382 aa18.76■□□□□ 0.59
SHISA4-201ENST00000362011 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.76■□□□□ 0.59
SHISA4-201ENST00000362011 MAN2C1Q9NTJ4 1040 aa18.76■□□□□ 0.59
SHISA4-201ENST00000362011 TUBD1Q9UJT1 453 aa18.76■□□□□ 0.59
SHISA4-201ENST00000362011 KLF13Q9Y2Y9 288 aaPredicted RBP18.76■□□□□ 0.59
SHISA4-201ENST00000362011 FAM47E-STBD1D6RA91 191 aa18.75■□□□□ 0.59
SHISA4-201ENST00000362011 TRIM3O75382 744 aaPredicted RBP18.75■□□□□ 0.59
SHISA4-201ENST00000362011 LYPD3O95274 346 aa18.75■□□□□ 0.59
SHISA4-201ENST00000362011 THY1P04216 161 aa18.75■□□□□ 0.59
SHISA4-201ENST00000362011 CD46P15529 392 aa18.75■□□□□ 0.59
SHISA4-201ENST00000362011 FUT4P22083 530 aa18.75■□□□□ 0.59
SHISA4-201ENST00000362011 QPRTQ15274 297 aa18.75■□□□□ 0.59
SHISA4-201ENST00000362011 INPP5JQ15735 1006 aaPredicted RBP18.75■□□□□ 0.59
SHISA4-201ENST00000362011 ALG10BQ5I7T1 473 aa18.75■□□□□ 0.59
SHISA4-201ENST00000362011 SLC25A25Q6KCM7 469 aa18.75■□□□□ 0.59
SHISA4-201ENST00000362011 ULK3Q6PHR2 472 aa18.75■□□□□ 0.59
SHISA4-201ENST00000362011 STK32CQ86UX6 486 aa18.75■□□□□ 0.59
SHISA4-201ENST00000362011 WDSUB1Q8N9V3 476 aa18.75■□□□□ 0.59
SHISA4-201ENST00000362011 TMEM234Q8WY98 164 aa18.75■□□□□ 0.59
SHISA4-201ENST00000362011 SLC38A4Q969I6 547 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms