RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 ZNF322Q6U7Q0 402 aaPredicted RBP12.97□□□□□ -0.33
COL6A1-201ENST00000361866 ZFPM2Q8WW38 1151 aa12.97□□□□□ -0.33
COL6A1-201ENST00000361866 CPNE2Q96FN4 548 aaPredicted RBP12.97□□□□□ -0.33
COL6A1-201ENST00000361866 TAF1LQ8IZX4 1826 aa12.97□□□□□ -0.33
COL6A1-201ENST00000361866 HEPACAM2A8MVW5 462 aa12.97□□□□□ -0.33
COL6A1-201ENST00000361866 PEX14O75381 377 aa12.97□□□□□ -0.33
COL6A1-201ENST00000361866 CD160O95971 181 aa12.97□□□□□ -0.33
COL6A1-201ENST00000361866 MMP12P39900 470 aa12.97□□□□□ -0.33
COL6A1-201ENST00000361866 SLC7A9P82251 487 aa12.97□□□□□ -0.33
COL6A1-201ENST00000361866 CDK3Q00526 305 aa12.97□□□□□ -0.33
COL6A1-201ENST00000361866 HENMT1Q5T8I9 393 aaKnown RBP12.97□□□□□ -0.33
COL6A1-201ENST00000361866 SLC35F2Q8IXU6 374 aa12.97□□□□□ -0.33
COL6A1-201ENST00000361866 TMEM99Q8N816 258 aa12.97□□□□□ -0.33
COL6A1-201ENST00000361866 INSM2Q96T92 566 aaPredicted RBP12.97□□□□□ -0.33
COL6A1-201ENST00000361866 POTEKPQ9BYX7 375 aa12.97□□□□□ -0.33
COL6A1-201ENST00000361866 A4GALTQ9NPC4 353 aa12.97□□□□□ -0.33
COL6A1-201ENST00000361866 POLR2AP24928 1970 aaKnown RBP12.97□□□□□ -0.33
COL6A1-201ENST00000361866 TMEM129A0AVI4 362 aa12.96□□□□□ -0.33
COL6A1-201ENST00000361866 TRABD2BA6NFA1 517 aa12.96□□□□□ -0.33
COL6A1-201ENST00000361866 PRICKLE3O43900 615 aaPredicted RBP12.96□□□□□ -0.33
COL6A1-201ENST00000361866 CPEP16870 476 aa12.96□□□□□ -0.33
COL6A1-201ENST00000361866 PSMB1P20618 241 aaKnown RBP12.96□□□□□ -0.33
COL6A1-201ENST00000361866 CRYBB2P43320 205 aa12.96□□□□□ -0.33
COL6A1-201ENST00000361866 CSRP3P50461 194 aa12.96□□□□□ -0.33
COL6A1-201ENST00000361866 CFAP77Q6ZQR2 320 aa12.96□□□□□ -0.33
COL6A1-201ENST00000361866 SLC38A3Q99624 504 aa12.96□□□□□ -0.33
COL6A1-201ENST00000361866 MRTO4Q9UKD2 239 aaKnown RBP12.96□□□□□ -0.33
COL6A1-201ENST00000361866 A0A0A6YYJ9 748 aa12.96□□□□□ -0.33
COL6A1-201ENST00000361866 METTL21EPA6NDL7 271 aa12.96□□□□□ -0.33
COL6A1-201ENST00000361866 KAT7O95251 611 aa12.96□□□□□ -0.33
COL6A1-201ENST00000361866 TRAPPC2P0DI81 140 aa12.96□□□□□ -0.33
COL6A1-201ENST00000361866 TRAPPC2BP0DI82 140 aa12.96□□□□□ -0.33
COL6A1-201ENST00000361866 AQP2P41181 271 aa12.96□□□□□ -0.33
COL6A1-201ENST00000361866 MRPL19P49406 292 aaKnown RBP12.96□□□□□ -0.33
COL6A1-201ENST00000361866 HNRNPA1L2Q32P51 320 aaKnown RBP12.96□□□□□ -0.33
COL6A1-201ENST00000361866 FAAP20Q6NZ36 180 aa12.96□□□□□ -0.33
COL6A1-201ENST00000361866 OR2M4Q96R27 311 aa12.96□□□□□ -0.33
COL6A1-201ENST00000361866 FN3KQ9H479 309 aa12.96□□□□□ -0.33
COL6A1-201ENST00000361866 ISG20L2Q9H9L3 353 aaKnown RBP12.96□□□□□ -0.33
COL6A1-201ENST00000361866 ZNF443Q9Y2A4 671 aaPredicted RBP12.96□□□□□ -0.33
COL6A1-201ENST00000361866 OR8G3PP0DMU2 310 aa12.96□□□□□ -0.34
COL6A1-201ENST00000361866 IGFALSP35858 605 aa12.96□□□□□ -0.34
COL6A1-201ENST00000361866 LSM11P83369 360 aaKnown RBP eCLIP12.96□□□□□ -0.34
COL6A1-201ENST00000361866 GDF7Q7Z4P5 450 aa12.96□□□□□ -0.34
COL6A1-201ENST00000361866 ADGRF3Q8IZF5 1079 aa12.96□□□□□ -0.34
COL6A1-201ENST00000361866 ARL14Q8N4G2 192 aa12.96□□□□□ -0.34
COL6A1-201ENST00000361866 KIAA1958Q8N8K9 716 aa12.96□□□□□ -0.34
COL6A1-201ENST00000361866 TP53I13Q8NBR0 393 aaPredicted RBP12.96□□□□□ -0.34
COL6A1-201ENST00000361866 OR5AK2Q8NH90 309 aa12.96□□□□□ -0.34
COL6A1-201ENST00000361866 CST11Q9H112 138 aa12.96□□□□□ -0.34
COL6A1-201ENST00000361866 EVA1BQ9NVM1 165 aa12.96□□□□□ -0.34
COL6A1-201ENST00000361866 FLVCR2Q9UPI3 526 aa12.96□□□□□ -0.34
COL6A1-201ENST00000361866 SLC35A3Q9Y2D2 325 aa12.96□□□□□ -0.34
COL6A1-201ENST00000361866 CABIN1Q9Y6J0 2220 aa12.96□□□□□ -0.34
COL6A1-201ENST00000361866 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.96□□□□□ -0.34
COL6A1-201ENST00000361866 CIB4A0PJX0 185 aa12.96□□□□□ -0.34
COL6A1-201ENST00000361866 B8ZZF3 427 aa12.96□□□□□ -0.34
COL6A1-201ENST00000361866 AKR1C4P17516 323 aa12.96□□□□□ -0.34
COL6A1-201ENST00000361866 PRKXP51817 358 aa12.96□□□□□ -0.34
COL6A1-201ENST00000361866 EIF2B5Q13144 721 aaKnown RBP12.96□□□□□ -0.34
COL6A1-201ENST00000361866 ZNF550Q7Z398 422 aa12.96□□□□□ -0.34
COL6A1-201ENST00000361866 KLHDC8BQ8IXV7 354 aa12.96□□□□□ -0.34
COL6A1-201ENST00000361866 ZNF680Q8NEM1 530 aa12.96□□□□□ -0.34
COL6A1-201ENST00000361866 PMM1Q92871 262 aa12.96□□□□□ -0.34
COL6A1-201ENST00000361866 MMABQ96EY8 250 aaPredicted RBP12.96□□□□□ -0.34
COL6A1-201ENST00000361866 PEX11GQ96HA9 241 aa12.96□□□□□ -0.34
COL6A1-201ENST00000361866 V9GY05 133 aa12.96□□□□□ -0.34
COL6A1-201ENST00000361866 UBR3Q6ZT12 1888 aa12.95□□□□□ -0.34
COL6A1-201ENST00000361866 SCGB1D2O95969 90 aa12.95□□□□□ -0.34
COL6A1-201ENST00000361866 CHRM4P08173 479 aa12.95□□□□□ -0.34
COL6A1-201ENST00000361866 ATP5A1P25705 553 aaKnown RBP12.95□□□□□ -0.34
COL6A1-201ENST00000361866 RBMS1P29558 406 aaKnown RBP12.95□□□□□ -0.34
COL6A1-201ENST00000361866 CHAF1BQ13112 559 aa12.95□□□□□ -0.34
COL6A1-201ENST00000361866 AIMP2Q13155 320 aaKnown RBP12.95□□□□□ -0.34
COL6A1-201ENST00000361866 DECR1Q16698 335 aa12.95□□□□□ -0.34
COL6A1-201ENST00000361866 PLA2G15Q8NCC3 412 aa12.95□□□□□ -0.34
COL6A1-201ENST00000361866 BRIX1Q8TDN6 353 aaKnown RBP12.95□□□□□ -0.34
COL6A1-201ENST00000361866 NRTNQ99748 197 aa12.95□□□□□ -0.34
COL6A1-201ENST00000361866 SLC23A1Q9UHI7 598 aa12.95□□□□□ -0.34
COL6A1-201ENST00000361866 NAALAD2Q9Y3Q0 740 aa12.95□□□□□ -0.34
COL6A1-201ENST00000361866 SC5DO75845 299 aa12.95□□□□□ -0.34
COL6A1-201ENST00000361866 HLA-DMAP28067 261 aa12.95□□□□□ -0.34
COL6A1-201ENST00000361866 HTR1FP30939 366 aa12.95□□□□□ -0.34
COL6A1-201ENST00000361866 PRSS3P35030 304 aa12.95□□□□□ -0.34
COL6A1-201ENST00000361866 LBX1P52954 281 aa12.95□□□□□ -0.34
COL6A1-201ENST00000361866 RAE1P78406 368 aaKnown RBP12.95□□□□□ -0.34
COL6A1-201ENST00000361866 CST6Q15828 149 aa12.95□□□□□ -0.34
COL6A1-201ENST00000361866 ZNF776Q68DI1 518 aaPredicted RBP12.95□□□□□ -0.34
COL6A1-201ENST00000361866 DUSP19Q8WTR2 217 aa12.95□□□□□ -0.34
COL6A1-201ENST00000361866 ZC3H10Q96K80 434 aaKnown RBP12.95□□□□□ -0.34
COL6A1-201ENST00000361866 FTSJ1Q9UET6 329 aa12.95□□□□□ -0.34
COL6A1-201ENST00000361866 POLHQ9Y253 713 aa12.95□□□□□ -0.34
COL6A1-201ENST00000361866 FARS2O95363 451 aaKnown RBP12.95□□□□□ -0.34
COL6A1-201ENST00000361866 LGI1O95970 557 aa12.95□□□□□ -0.34
COL6A1-201ENST00000361866 CTSAP10619 480 aa12.95□□□□□ -0.34
COL6A1-201ENST00000361866 MAKP20794 623 aa12.95□□□□□ -0.34
COL6A1-201ENST00000361866 BMPR1AP36894 532 aa12.95□□□□□ -0.34
COL6A1-201ENST00000361866 POU4F2Q12837 409 aa12.95□□□□□ -0.34
COL6A1-201ENST00000361866 DCST2Q5T1A1 773 aa12.95□□□□□ -0.34
COL6A1-201ENST00000361866 FIGLAQ6QHK4 219 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms