RNA–Protein interactions for RNA: ENST00000361655.6

PCDH11X-202, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-202ENST00000361655 PYCR1P32322 319 aa5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 TTKP33981 857 aa5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 HOXD12P35452 270 aa5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 PCYT1AP49585 367 aa5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 APOFQ13790 326 aa5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 IL11RAQ14626 422 aa5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 COL28A1Q2UY09 1125 aa5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 DEFB109BQ30KR1 87 aa5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 CAMKMTQ7Z624 323 aa5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 TSPYL5Q86VY4 417 aaPredicted RBP5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 CALHM3Q86XJ0 350 aa5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 MARVELD2Q8N4S9 558 aa5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 ZNF676Q8N7Q3 588 aa5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 OR7G1Q8NGA0 311 aa5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 OR1J4Q8NGS1 313 aa5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 OR2AJ1Q8NGZ0 328 aa5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 NXPE2Q96DL1 559 aa5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 STACQ99469 402 aa5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 UTP23Q9BRU9 249 aaKnown RBP5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 MENTQ9BUN1 341 aa5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 ZNF717Q9BY31 904 aaPredicted RBP5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 ZNF768Q9H5H4 540 aaKnown RBP5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 KIAA1671Q9BY89 1806 aa5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 GBF1Q92538 1859 aa5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 TNFRSF10AO00220 468 aa5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 TRMUO75648 421 aaKnown RBP5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 LCKP06239 509 aa5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 ZNF43P17038 809 aa5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 ACVR1BP36896 505 aa5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 ZFP36L2P47974 494 aaKnown RBP5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 SOX2P48431 317 aa5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 CYB561P49447 251 aa5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 CLRN1P58418 232 aa5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 TXNL4AP83876 142 aaKnown RBP5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 GALK2Q01415 458 aa5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 POU3F1Q03052 451 aaPredicted RBP5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 DBPQ10586 325 aaPredicted RBP5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 COX10Q12887 443 aa5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 ZNF628Q5EBL2 1059 aa5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 YOD1Q5VVQ6 348 aaPredicted RBP5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 LIPKQ5VXJ0 399 aa5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 B3GNTL1Q67FW5 361 aaPredicted RBP5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 OR2L13Q8N349 312 aa5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 ANKK1Q8NFD2 765 aa5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 GOT1L1Q8NHS2 421 aaPredicted RBP5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 SNIP1Q8TAD8 396 aaKnown RBP5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 NR4A3Q92570 626 aa5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 RDH12Q96NR8 316 aa5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 TM9SF2Q99805 663 aa5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 KCNS3Q9BQ31 491 aa5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 MFRPQ9BY79 579 aa5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 FAM192AQ9GZU8 254 aa5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 WWTR1Q9GZV5 400 aa5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 SLITRK2Q9H156 845 aa5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 RNF121Q9H920 327 aa5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 PLGRKTQ9HBL7 147 aa5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 MCCC2Q9HCC0 563 aa5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 THSD1Q9NS62 852 aa5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 P4HTMQ9NXG6 502 aa5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 SIDT1Q9NXL6 827 aaKnown RBP5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 GALNT8Q9NY28 637 aa5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 TMEM184BQ9Y519 407 aaPredicted RBP5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 GPC6Q9Y625 555 aaPredicted RBP5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 SPTBN1Q01082 2364 aaKnown RBP5.06□□□□□ -1.6
PCDH11X-202ENST00000361655 A0A087WV62 115 aa5.05□□□□□ -1.6
PCDH11X-202ENST00000361655 A0A1W2PNR3 127 aa5.05□□□□□ -1.6
PCDH11X-202ENST00000361655 SERTM1A2A2V5 107 aa5.05□□□□□ -1.6
PCDH11X-202ENST00000361655 STMND1H3BQB6 276 aa5.05□□□□□ -1.6
PCDH11X-202ENST00000361655 SLC30A4O14863 429 aa5.05□□□□□ -1.6
PCDH11X-202ENST00000361655 DENRO43583 198 aaKnown RBP5.05□□□□□ -1.6
PCDH11X-202ENST00000361655 SUSD5O60279 629 aa5.05□□□□□ -1.6
PCDH11X-202ENST00000361655 FOXD2O60548 495 aaPredicted RBP5.05□□□□□ -1.6
PCDH11X-202ENST00000361655 SLITRK5O94991 958 aa5.05□□□□□ -1.6
PCDH11X-202ENST00000361655 ENDOUP21128 410 aaKnown RBP5.05□□□□□ -1.6
PCDH11X-202ENST00000361655 MYF6P23409 242 aa5.05□□□□□ -1.6
PCDH11X-202ENST00000361655 ABCD3P28288 659 aa5.05□□□□□ -1.6
PCDH11X-202ENST00000361655 MTNR1AP48039 350 aa5.05□□□□□ -1.6
PCDH11X-202ENST00000361655 MAN2A2P49641 1150 aa5.05□□□□□ -1.6
PCDH11X-202ENST00000361655 C17orf67Q0P5P2 114 aa5.05□□□□□ -1.6
PCDH11X-202ENST00000361655 SLC23A3Q6PIS1 610 aa5.05□□□□□ -1.6
PCDH11X-202ENST00000361655 KLHL17Q6TDP4 642 aa5.05□□□□□ -1.6
PCDH11X-202ENST00000361655 KRT77Q7Z794 578 aa5.05□□□□□ -1.6
PCDH11X-202ENST00000361655 KLHL36Q8N4N3 616 aa5.05□□□□□ -1.6
PCDH11X-202ENST00000361655 AMER2Q8N7J2 671 aa5.05□□□□□ -1.6
PCDH11X-202ENST00000361655 GPR32P1Q8NGA4 272 aa5.05□□□□□ -1.6
PCDH11X-202ENST00000361655 OR1N1Q8NGS0 311 aa5.05□□□□□ -1.6
PCDH11X-202ENST00000361655 HDAC2Q92769 488 aaKnown RBP5.05□□□□□ -1.6
PCDH11X-202ENST00000361655 TMEM80Q96HE8 168 aa5.05□□□□□ -1.6
PCDH11X-202ENST00000361655 ZNF578Q96N58 590 aaPredicted RBP5.05□□□□□ -1.6
PCDH11X-202ENST00000361655 KATNB1Q9BVA0 655 aa5.05□□□□□ -1.6
PCDH11X-202ENST00000361655 RBM24Q9BX46 236 aaKnown RBP5.05□□□□□ -1.6
PCDH11X-202ENST00000361655 AICDAQ9GZX7 198 aa5.05□□□□□ -1.6
PCDH11X-202ENST00000361655 SYNPO2LQ9H987 977 aa5.05□□□□□ -1.6
PCDH11X-202ENST00000361655 TESQ9UGI8 421 aaKnown RBP5.05□□□□□ -1.6
PCDH11X-202ENST00000361655 LAMP5Q9UJQ1 280 aa5.05□□□□□ -1.6
PCDH11X-202ENST00000361655 OTOGLQ3ZCN5 2332 aa5.05□□□□□ -1.6
PCDH11X-202ENST00000361655 TMED7-TICAM2A0A0A6YYA0 188 aa5.05□□□□□ -1.6
PCDH11X-202ENST00000361655 SH3PXD2BA1X283 911 aa5.05□□□□□ -1.6
PCDH11X-202ENST00000361655 PRAMEF25A6NGN4 478 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms